EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000001525 (Gene tree)
Gene ID: 105026876
Gene Symbol: nop53
Alias: fb60b03|gltscr2|wu:fb60b03|zgc:123178
Full Name: NOP53 ribosome biogenesis factor
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 9357 bases
Position: chrLG01:5213361-5222717
Accession: 105026876
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000039524	Nop53	PF07767.11	5e-88	1	1
ENSELUP00000020460	Nop53	PF07767.11	9.2e-69	1	2
ENSELUP00000020460	Nop53	PF07767.11	9.2e-69	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000030913	-	3270	XM_010898652	ENSELUP00000039524	454 (aa)	XP_010896954	UPI000661F311
ENSELUT00000030887	-	1365	-	ENSELUP00000020460	454 (aa)	-	-

Gene Model

Click here to download ENSELUG00000001525's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000001525's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000001525	nop53	89	48.492	ENSG00000105373	NOP53	99	71.429	Homo_sapiens
ENSELUG00000001525	nop53	100	66.739	ENSAPOG00000006446	nop53	100	66.955	Acanthochromis_polyacanthus
ENSELUG00000001525	nop53	89	45.089	ENSAMEG00000015214	NOP53	88	44.196	Ailuropoda_melanoleuca
ENSELUG00000001525	nop53	74	61.834	ENSACIG00000002467	nop53	98	61.243	Amphilophus_citrinellus
ENSELUG00000001525	nop53	100	66.811	ENSAOCG00000007002	nop53	100	67.462	Amphiprion_ocellaris
ENSELUG00000001525	nop53	100	67.387	ENSAPEG00000024564	nop53	100	68.035	Amphiprion_percula
ENSELUG00000001525	nop53	96	67.191	ENSATEG00000021860	nop53	100	67.416	Anabas_testudineus
ENSELUG00000001525	nop53	57	54.579	ENSACAG00000011362	-	93	54.579	Anolis_carolinensis
ENSELUG00000001525	nop53	93	45.351	ENSANAG00000007933	NOP53	93	46.028	Aotus_nancymaae
ENSELUG00000001525	nop53	100	64.009	ENSACLG00000011832	nop53	100	64.655	Astatotilapia_calliptera
ENSELUG00000001525	nop53	97	63.043	ENSAMXG00000014883	nop53	99	64.301	Astyanax_mexicanus
ENSELUG00000001525	nop53	89	50.117	ENSBTAG00000021192	NOP53	79	49.650	Bos_taurus
ENSELUG00000001525	nop53	89	48.832	ENSCJAG00000011385	NOP53	88	48.956	Callithrix_jacchus
ENSELUG00000001525	nop53	96	48.408	ENSCAFG00000004080	NOP53	88	49.423	Canis_familiaris
ENSELUG00000001525	nop53	89	49.882	ENSCHIG00000009393	NOP53	88	49.766	Capra_hircus
ENSELUG00000001525	nop53	89	44.340	ENSTSYG00000036631	NOP53	86	43.632	Carlito_syrichta
ENSELUG00000001525	nop53	84	49.000	ENSCAPG00000013148	NOP53	99	48.500	Cavia_aperea
ENSELUG00000001525	nop53	89	49.528	ENSCPOG00000015665	NOP53	88	49.057	Cavia_porcellus
ENSELUG00000001525	nop53	89	49.882	ENSCCAG00000025477	NOP53	87	49.652	Cebus_capucinus
ENSELUG00000001525	nop53	89	50.236	ENSCATG00000032842	NOP53	87	50.000	Cercocebus_atys
ENSELUG00000001525	nop53	89	48.244	ENSCLAG00000001860	NOP53	88	48.372	Chinchilla_lanigera
ENSELUG00000001525	nop53	89	49.184	ENSCSAG00000002928	NOP53	87	48.956	Chlorocebus_sabaeus
ENSELUG00000001525	nop53	85	50.000	ENSCPBG00000009047	NOP53	94	50.123	Chrysemys_picta_bellii
ENSELUG00000001525	nop53	90	33.806	ENSCING00000021395	-	96	33.882	Ciona_intestinalis
ENSELUG00000001525	nop53	90	33.255	ENSCSAVG00000006009	-	95	32.941	Ciona_savignyi
ENSELUG00000001525	nop53	89	45.606	ENSCANG00000039648	NOP53	86	45.540	Colobus_angolensis_palliatus
ENSELUG00000001525	nop53	96	47.234	ENSCGRG00001019033	Nop53	88	48.380	Cricetulus_griseus_chok1gshd
ENSELUG00000001525	nop53	98	60.667	ENSCSEG00000014834	nop53	98	60.667	Cynoglossus_semilaevis
ENSELUG00000001525	nop53	100	67.094	ENSCVAG00000005940	nop53	100	66.880	Cyprinodon_variegatus
ENSELUG00000001525	nop53	99	65.435	ENSDARG00000100452	nop53	99	65.435	Danio_rerio
ENSELUG00000001525	nop53	98	47.639	ENSDNOG00000005165	NOP53	79	49.531	Dasypus_novemcinctus
ENSELUG00000001525	nop53	91	31.461	FBgn0030061	CG1785	90	31.293	Drosophila_melanogaster
ENSELUG00000001525	nop53	98	41.886	ENSEBUG00000012747	nop53	90	42.619	Eptatretus_burgeri
ENSELUG00000001525	nop53	96	48.932	ENSEASG00005004345	NOP53	84	50.694	Equus_asinus_asinus
ENSELUG00000001525	nop53	96	48.414	ENSECAG00000026850	NOP53	84	50.230	Equus_caballus
ENSELUG00000001525	nop53	85	73.438	ENSEEUG00000005287	NOP53	74	73.438	Erinaceus_europaeus
ENSELUG00000001525	nop53	89	48.730	ENSFCAG00000010861	NOP53	88	48.618	Felis_catus
ENSELUG00000001525	nop53	89	44.310	ENSFDAG00000010478	NOP53	86	44.310	Fukomys_damarensis
ENSELUG00000001525	nop53	100	67.457	ENSFHEG00000017763	nop53	97	67.312	Fundulus_heteroclitus
ENSELUG00000001525	nop53	100	60.917	ENSGMOG00000014299	nop53	100	60.699	Gadus_morhua
ENSELUG00000001525	nop53	92	48.546	ENSGALG00000039473	NOP53	70	49.074	Gallus_gallus
ENSELUG00000001525	nop53	100	63.871	ENSGAFG00000013301	nop53	99	63.656	Gambusia_affinis
ENSELUG00000001525	nop53	100	63.478	ENSGACG00000005766	nop53	100	63.478	Gasterosteus_aculeatus
ENSELUG00000001525	nop53	89	43.972	ENSGGOG00000024728	-	87	43.972	Gorilla_gorilla
ENSELUG00000001525	nop53	89	48.019	ENSGGOG00000005462	NOP53	87	49.296	Gorilla_gorilla
ENSELUG00000001525	nop53	100	64.009	ENSHBUG00000023625	nop53	100	64.655	Haplochromis_burtoni
ENSELUG00000001525	nop53	89	48.598	ENSHGLG00000018240	NOP53	88	48.364	Heterocephalus_glaber_female
ENSELUG00000001525	nop53	67	61.062	ENSHGLG00100015613	NOP53	81	61.062	Heterocephalus_glaber_male
ENSELUG00000001525	nop53	100	62.319	ENSHCOG00000017133	nop53	100	62.319	Hippocampus_comes
ENSELUG00000001525	nop53	99	62.963	ENSIPUG00000008154	nop53	88	63.399	Ictalurus_punctatus
ENSELUG00000001525	nop53	89	51.300	ENSSTOG00000022092	NOP53	87	51.054	Ictidomys_tridecemlineatus
ENSELUG00000001525	nop53	89	47.664	ENSJJAG00000007854	Nop53	88	47.775	Jaculus_jaculus
ENSELUG00000001525	nop53	96	64.414	ENSKMAG00000020756	nop53	100	64.414	Kryptolebias_marmoratus
ENSELUG00000001525	nop53	99	64.847	ENSLBEG00000011432	nop53	99	65.502	Labrus_bergylta
ENSELUG00000001525	nop53	85	51.852	ENSLACG00000018320	NOP53	99	51.852	Latimeria_chalumnae
ENSELUG00000001525	nop53	100	57.359	ENSLOCG00000014178	nop53	100	55.844	Lepisosteus_oculatus
ENSELUG00000001525	nop53	89	50.000	ENSMFAG00000045103	NOP53	87	49.188	Macaca_fascicularis
ENSELUG00000001525	nop53	89	50.000	ENSMMUG00000013348	NOP53	99	71.429	Macaca_mulatta
ENSELUG00000001525	nop53	89	50.000	ENSMNEG00000042540	NOP53	84	50.236	Macaca_nemestrina
ENSELUG00000001525	nop53	89	45.585	ENSMLEG00000032475	NOP53	87	45.585	Mandrillus_leucophaeus
ENSELUG00000001525	nop53	99	63.812	ENSMAMG00000012652	nop53	99	68.094	Mastacembelus_armatus
ENSELUG00000001525	nop53	100	62.039	ENSMZEG00005005033	nop53	100	62.039	Maylandia_zebra
ENSELUG00000001525	nop53	89	49.061	ENSMAUG00000012617	Nop53	87	49.061	Mesocricetus_auratus
ENSELUG00000001525	nop53	92	46.833	ENSMICG00000005580	NOP53	92	48.244	Microcebus_murinus
ENSELUG00000001525	nop53	89	50.118	ENSMOCG00000008367	Nop53	88	49.763	Microtus_ochrogaster
ENSELUG00000001525	nop53	100	63.636	ENSMMOG00000006515	nop53	100	66.667	Mola_mola
ENSELUG00000001525	nop53	97	47.516	ENSMODG00000008721	NOP53	92	42.706	Monodelphis_domestica
ENSELUG00000001525	nop53	100	66.231	ENSMALG00000020350	nop53	96	67.538	Monopterus_albus
ENSELUG00000001525	nop53	89	51.620	MGP_CAROLIEiJ_G0029218	Nop53	88	50.694	Mus_caroli
ENSELUG00000001525	nop53	89	51.157	ENSMUSG00000041560	Nop53	88	50.926	Mus_musculus
ENSELUG00000001525	nop53	86	50.000	MGP_PahariEiJ_G0021074	-	95	50.237	Mus_pahari
ENSELUG00000001525	nop53	89	50.808	MGP_SPRETEiJ_G0030298	Nop53	88	49.423	Mus_spretus
ENSELUG00000001525	nop53	96	47.890	ENSMPUG00000004456	NOP53	88	48.618	Mustela_putorius_furo
ENSELUG00000001525	nop53	54	59.843	ENSMLUG00000027066	-	99	49.248	Myotis_lucifugus
ENSELUG00000001525	nop53	96	47.826	ENSNGAG00000019894	Nop53	88	49.289	Nannospalax_galili
ENSELUG00000001525	nop53	95	58.409	ENSNBRG00000002057	nop53	93	58.409	Neolamprologus_brichardi
ENSELUG00000001525	nop53	89	50.472	ENSNLEG00000003143	NOP53	87	50.585	Nomascus_leucogenys
ENSELUG00000001525	nop53	62	39.249	ENSNLEG00000028326	-	89	41.985	Nomascus_leucogenys
ENSELUG00000001525	nop53	77	42.061	ENSMEUG00000002525	-	99	42.061	Notamacropus_eugenii
ENSELUG00000001525	nop53	89	48.140	ENSODEG00000006707	NOP53	88	48.946	Octodon_degus
ENSELUG00000001525	nop53	100	63.002	ENSONIG00000016624	nop53	100	65.376	Oreochromis_niloticus
ENSELUG00000001525	nop53	100	62.690	ENSORLG00000008659	nop53	100	62.907	Oryzias_latipes
ENSELUG00000001525	nop53	100	59.783	ENSORLG00020019916	nop53	97	59.783	Oryzias_latipes_hni
ENSELUG00000001525	nop53	100	64.147	ENSORLG00015001315	nop53	100	64.147	Oryzias_latipes_hsok
ENSELUG00000001525	nop53	98	63.877	ENSOMEG00000018244	nop53	100	63.871	Oryzias_melastigma
ENSELUG00000001525	nop53	89	71.642	ENSOGAG00000024300	NOP53	78	71.642	Otolemur_garnettii
ENSELUG00000001525	nop53	88	39.765	ENSOARG00000011414	NOP53	87	39.529	Ovis_aries
ENSELUG00000001525	nop53	89	47.552	ENSPPAG00000002927	-	87	48.349	Pan_paniscus
ENSELUG00000001525	nop53	89	43.326	ENSPPAG00000032995	-	86	45.047	Pan_paniscus
ENSELUG00000001525	nop53	96	42.333	ENSPPAG00000029337	-	87	44.681	Pan_paniscus
ENSELUG00000001525	nop53	89	48.730	ENSPPRG00000008954	NOP53	88	48.037	Panthera_pardus
ENSELUG00000001525	nop53	96	42.333	ENSPTRG00000052493	-	87	44.681	Pan_troglodytes
ENSELUG00000001525	nop53	89	47.209	ENSPTRG00000043520	-	87	48.000	Pan_troglodytes
ENSELUG00000001525	nop53	89	49.650	ENSPTRG00000011215	NOP53	87	50.236	Pan_troglodytes
ENSELUG00000001525	nop53	89	50.000	ENSPANG00000002964	NOP53	87	49.188	Papio_anubis
ENSELUG00000001525	nop53	100	62.121	ENSPKIG00000000127	nop53	100	62.121	Paramormyrops_kingsleyae
ENSELUG00000001525	nop53	100	65.310	ENSPMGG00000021579	nop53	100	64.454	Periophthalmus_magnuspinnatus
ENSELUG00000001525	nop53	89	50.116	ENSPEMG00000006856	Nop53	88	48.843	Peromyscus_maniculatus_bairdii
ENSELUG00000001525	nop53	50	43.277	ENSPMAG00000001501	-	88	44.215	Petromyzon_marinus
ENSELUG00000001525	nop53	97	45.474	ENSPCIG00000016718	NOP53	89	48.227	Phascolarctos_cinereus
ENSELUG00000001525	nop53	100	65.171	ENSPFOG00000002839	nop53	100	65.171	Poecilia_formosa
ENSELUG00000001525	nop53	100	64.957	ENSPLAG00000006675	nop53	100	64.957	Poecilia_latipinna
ENSELUG00000001525	nop53	62	67.596	ENSPLAG00000009285	-	89	66.202	Poecilia_latipinna
ENSELUG00000001525	nop53	62	67.944	ENSPMEG00000006978	nop53	89	66.551	Poecilia_mexicana
ENSELUG00000001525	nop53	100	65.236	ENSPMEG00000009589	nop53	100	65.451	Poecilia_mexicana
ENSELUG00000001525	nop53	100	60.480	ENSPREG00000008711	nop53	100	61.339	Poecilia_reticulata
ENSELUG00000001525	nop53	89	45.991	ENSPPYG00000010181	NOP53	87	46.604	Pongo_abelii
ENSELUG00000001525	nop53	99	44.658	ENSPCAG00000007692	NOP53	89	46.336	Procavia_capensis
ENSELUG00000001525	nop53	73	61.947	ENSPCOG00000016124	NOP53	86	44.794	Propithecus_coquereli
ENSELUG00000001525	nop53	73	48.669	ENSPVAG00000014671	NOP53	72	48.669	Pteropus_vampyrus
ENSELUG00000001525	nop53	100	64.224	ENSPNYG00000001341	nop53	100	64.871	Pundamilia_nyererei
ENSELUG00000001525	nop53	99	65.096	ENSPNAG00000012520	nop53	99	66.234	Pygocentrus_nattereri
ENSELUG00000001525	nop53	89	50.234	ENSRNOG00000013023	Nop53	88	50.115	Rattus_norvegicus
ENSELUG00000001525	nop53	89	49.306	ENSRBIG00000036427	NOP53	87	49.306	Rhinopithecus_bieti
ENSELUG00000001525	nop53	89	49.535	ENSRROG00000042298	NOP53	88	49.306	Rhinopithecus_roxellana
ENSELUG00000001525	nop53	89	49.764	ENSSBOG00000033115	NOP53	87	50.117	Saimiri_boliviensis_boliviensis
ENSELUG00000001525	nop53	86	47.420	ENSSHAG00000002239	NOP53	99	47.101	Sarcophilus_harrisii
ENSELUG00000001525	nop53	100	63.261	ENSSFOG00015007062	gltscr2	100	63.261	Scleropages_formosus
ENSELUG00000001525	nop53	100	66.379	ENSSMAG00000000212	nop53	100	66.379	Scophthalmus_maximus
ENSELUG00000001525	nop53	100	67.174	ENSSDUG00000010575	nop53	100	67.609	Seriola_dumerili
ENSELUG00000001525	nop53	100	66.013	ENSSLDG00000000140	nop53	97	66.449	Seriola_lalandi_dorsalis
ENSELUG00000001525	nop53	73	49.855	ENSSARG00000014109	NOP53	72	48.986	Sorex_araneus
ENSELUG00000001525	nop53	83	42.308	ENSSPUG00000004420	NOP53	86	42.564	Sphenodon_punctatus
ENSELUG00000001525	nop53	100	66.879	ENSSPAG00000000318	nop53	100	68.387	Stegastes_partitus
ENSELUG00000001525	nop53	89	47.642	ENSSSCG00000022774	NOP53	87	46.934	Sus_scrofa
ENSELUG00000001525	nop53	100	64.502	ENSTRUG00000004944	nop53	100	64.502	Takifugu_rubripes
ENSELUG00000001525	nop53	54	68.000	ENSTNIG00000014330	nop53	95	68.000	Tetraodon_nigroviridis
ENSELUG00000001525	nop53	66	61.062	ENSTBEG00000008708	NOP53	64	61.261	Tupaia_belangeri
ENSELUG00000001525	nop53	89	48.741	ENSTTRG00000011831	NOP53	88	48.741	Tursiops_truncatus
ENSELUG00000001525	nop53	89	46.651	ENSUAMG00000028254	NOP53	88	45.958	Ursus_americanus
ENSELUG00000001525	nop53	74	44.474	ENSVVUG00000023365	NOP53	65	44.643	Vulpes_vulpes
ENSELUG00000001525	nop53	88	63.158	ENSXETG00000002782	nop53	91	50.952	Xenopus_tropicalis
ENSELUG00000001525	nop53	100	65.217	ENSXCOG00000004436	nop53	100	64.425	Xiphophorus_couchianus
ENSELUG00000001525	nop53	100	66.022	ENSXMAG00000002589	nop53	100	65.021	Xiphophorus_maculatus