EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000001558 (Gene tree)
Gene ID: 105028764
Gene Symbol: polr3f
Alias: zgc:56299|zgc:76983
Full Name: RNA polymerase III subunit F
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 11678 bases
Position: chrLG13:6011943-6023620
Accession: 105028764
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000002610	RNA_pol_Rpc34	PF05158.12	4.8e-103	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000015431	-	945	XM_010901726	ENSELUP00000002610	314 (aa)	XP_010900028	UPI0005772E59

Gene Model

Click here to download ENSELUG00000001558's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03020	RNA polymerase	KEGG
els04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000001558's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000001558	polr3f	100	89.241	ENSG00000132664	POLR3F	100	89.241	Homo_sapiens
ENSELUG00000001558	polr3f	100	91.139	ENSAPOG00000008271	polr3f	100	91.139	Acanthochromis_polyacanthus
ENSELUG00000001558	polr3f	100	88.924	ENSAMEG00000005222	POLR3F	100	88.924	Ailuropoda_melanoleuca
ENSELUG00000001558	polr3f	100	86.624	ENSACIG00000006705	polr3f	100	86.624	Amphilophus_citrinellus
ENSELUG00000001558	polr3f	100	90.506	ENSAOCG00000000687	polr3f	100	90.506	Amphiprion_ocellaris
ENSELUG00000001558	polr3f	100	90.190	ENSAPEG00000015263	polr3f	100	90.190	Amphiprion_percula
ENSELUG00000001558	polr3f	88	93.818	ENSATEG00000015539	polr3f	100	93.818	Anabas_testudineus
ENSELUG00000001558	polr3f	88	90.545	ENSAPLG00000005533	POLR3F	100	90.545	Anas_platyrhynchos
ENSELUG00000001558	polr3f	98	88.026	ENSACAG00000014293	POLR3F	99	88.312	Anolis_carolinensis
ENSELUG00000001558	polr3f	100	89.241	ENSANAG00000026726	POLR3F	100	89.241	Aotus_nancymaae
ENSELUG00000001558	polr3f	100	91.772	ENSACLG00000003615	polr3f	100	91.772	Astatotilapia_calliptera
ENSELUG00000001558	polr3f	100	93.949	ENSAMXG00000036020	polr3f	100	93.949	Astyanax_mexicanus
ENSELUG00000001558	polr3f	100	88.608	ENSBTAG00000008825	POLR3F	100	88.608	Bos_taurus
ENSELUG00000001558	polr3f	98	33.442	WBGene00021112	W09C3.4	98	33.442	Caenorhabditis_elegans
ENSELUG00000001558	polr3f	100	89.241	ENSCJAG00000005159	POLR3F	100	89.241	Callithrix_jacchus
ENSELUG00000001558	polr3f	100	88.608	ENSCAFG00000005420	POLR3F	100	88.608	Canis_familiaris
ENSELUG00000001558	polr3f	100	88.608	ENSCAFG00020027500	POLR3F	100	88.608	Canis_lupus_dingo
ENSELUG00000001558	polr3f	100	88.608	ENSCHIG00000014743	POLR3F	100	88.608	Capra_hircus
ENSELUG00000001558	polr3f	100	88.608	ENSTSYG00000004207	POLR3F	100	88.608	Carlito_syrichta
ENSELUG00000001558	polr3f	94	49.324	ENSCAPG00000008423	POLR3F	100	74.675	Cavia_aperea
ENSELUG00000001558	polr3f	100	88.608	ENSCPOG00000002400	POLR3F	100	88.608	Cavia_porcellus
ENSELUG00000001558	polr3f	100	79.430	ENSCCAG00000021800	POLR3F	100	79.430	Cebus_capucinus
ENSELUG00000001558	polr3f	100	88.924	ENSCATG00000019507	POLR3F	100	88.924	Cercocebus_atys
ENSELUG00000001558	polr3f	100	88.924	ENSCLAG00000016296	POLR3F	100	88.924	Chinchilla_lanigera
ENSELUG00000001558	polr3f	100	88.924	ENSCSAG00000011513	POLR3F	100	88.924	Chlorocebus_sabaeus
ENSELUG00000001558	polr3f	73	91.011	ENSCHOG00000013268	POLR3F	73	91.011	Choloepus_hoffmanni
ENSELUG00000001558	polr3f	88	89.818	ENSCPBG00000023473	POLR3F	100	89.818	Chrysemys_picta_bellii
ENSELUG00000001558	polr3f	99	60.510	ENSCING00000001212	-	99	60.510	Ciona_intestinalis
ENSELUG00000001558	polr3f	71	60.090	ENSCSAVG00000003340	-	96	63.905	Ciona_savignyi
ENSELUG00000001558	polr3f	92	89.003	ENSCANG00000037390	POLR3F	100	89.003	Colobus_angolensis_palliatus
ENSELUG00000001558	polr3f	100	88.291	ENSCGRG00001002032	Polr3f	100	88.291	Cricetulus_griseus_chok1gshd
ENSELUG00000001558	polr3f	100	88.291	ENSCGRG00000010852	Polr3f	100	88.291	Cricetulus_griseus_crigri
ENSELUG00000001558	polr3f	100	89.873	ENSCSEG00000001247	polr3f	100	89.873	Cynoglossus_semilaevis
ENSELUG00000001558	polr3f	100	89.873	ENSCVAG00000007611	polr3f	100	89.873	Cyprinodon_variegatus
ENSELUG00000001558	polr3f	100	94.904	ENSDARG00000012572	polr3f	100	94.904	Danio_rerio
ENSELUG00000001558	polr3f	100	85.759	ENSDNOG00000010719	POLR3F	100	85.759	Dasypus_novemcinctus
ENSELUG00000001558	polr3f	100	88.924	ENSDORG00000016352	Polr3f	100	88.924	Dipodomys_ordii
ENSELUG00000001558	polr3f	92	51.379	FBgn0038951	CG5380	96	51.379	Drosophila_melanogaster
ENSELUG00000001558	polr3f	89	53.957	ENSETEG00000015485	-	99	53.957	Echinops_telfairi
ENSELUG00000001558	polr3f	100	77.389	ENSEBUG00000006783	polr3f	100	77.389	Eptatretus_burgeri
ENSELUG00000001558	polr3f	100	89.241	ENSEASG00005002022	POLR3F	100	89.241	Equus_asinus_asinus
ENSELUG00000001558	polr3f	100	89.241	ENSECAG00000009920	POLR3F	100	89.241	Equus_caballus
ENSELUG00000001558	polr3f	80	92.000	ENSEEUG00000000184	POLR3F	80	92.000	Erinaceus_europaeus
ENSELUG00000001558	polr3f	100	88.924	ENSFCAG00000013828	POLR3F	100	88.924	Felis_catus
ENSELUG00000001558	polr3f	88	91.636	ENSFALG00000007623	POLR3F	100	91.636	Ficedula_albicollis
ENSELUG00000001558	polr3f	100	88.291	ENSFDAG00000002528	POLR3F	100	88.291	Fukomys_damarensis
ENSELUG00000001558	polr3f	100	88.924	ENSFHEG00000006450	polr3f	100	88.924	Fundulus_heteroclitus
ENSELUG00000001558	polr3f	100	90.127	ENSGALG00000008749	POLR3F	100	90.127	Gallus_gallus
ENSELUG00000001558	polr3f	100	90.823	ENSGAFG00000003698	polr3f	100	90.823	Gambusia_affinis
ENSELUG00000001558	polr3f	100	88.535	ENSGAGG00000006151	POLR3F	100	88.535	Gopherus_agassizii
ENSELUG00000001558	polr3f	100	89.241	ENSGGOG00000011543	POLR3F	100	89.241	Gorilla_gorilla
ENSELUG00000001558	polr3f	100	92.089	ENSHBUG00000013806	polr3f	100	92.089	Haplochromis_burtoni
ENSELUG00000001558	polr3f	100	88.291	ENSHGLG00000011867	POLR3F	100	88.291	Heterocephalus_glaber_female
ENSELUG00000001558	polr3f	100	88.291	ENSHGLG00100012577	POLR3F	100	88.291	Heterocephalus_glaber_male
ENSELUG00000001558	polr3f	100	80.696	ENSHCOG00000011751	polr3f	100	80.696	Hippocampus_comes
ENSELUG00000001558	polr3f	100	93.312	ENSIPUG00000013347	polr3f	100	93.312	Ictalurus_punctatus
ENSELUG00000001558	polr3f	100	88.924	ENSSTOG00000013588	POLR3F	100	88.924	Ictidomys_tridecemlineatus
ENSELUG00000001558	polr3f	100	88.291	ENSJJAG00000017513	Polr3f	100	88.291	Jaculus_jaculus
ENSELUG00000001558	polr3f	88	85.455	ENSKMAG00000016495	polr3f	100	84.364	Kryptolebias_marmoratus
ENSELUG00000001558	polr3f	74	96.552	ENSLBEG00000011998	polr3f	100	96.552	Labrus_bergylta
ENSELUG00000001558	polr3f	100	89.809	ENSLACG00000009371	POLR3F	100	89.809	Latimeria_chalumnae
ENSELUG00000001558	polr3f	100	94.268	ENSLOCG00000015701	polr3f	100	94.268	Lepisosteus_oculatus
ENSELUG00000001558	polr3f	100	88.608	ENSLAFG00000004929	POLR3F	100	88.608	Loxodonta_africana
ENSELUG00000001558	polr3f	100	88.924	ENSMFAG00000002227	POLR3F	100	88.924	Macaca_fascicularis
ENSELUG00000001558	polr3f	88	90.909	ENSMMUG00000004143	POLR3F	100	90.909	Macaca_mulatta
ENSELUG00000001558	polr3f	100	88.924	ENSMNEG00000033404	POLR3F	100	88.924	Macaca_nemestrina
ENSELUG00000001558	polr3f	100	88.924	ENSMLEG00000021905	POLR3F	100	88.924	Mandrillus_leucophaeus
ENSELUG00000001558	polr3f	100	92.089	ENSMAMG00000017975	polr3f	100	92.089	Mastacembelus_armatus
ENSELUG00000001558	polr3f	100	91.456	ENSMZEG00005015134	polr3f	100	91.456	Maylandia_zebra
ENSELUG00000001558	polr3f	100	90.764	ENSMGAG00000006691	POLR3F	100	90.764	Meleagris_gallopavo
ENSELUG00000001558	polr3f	100	88.291	ENSMAUG00000020176	Polr3f	100	88.291	Mesocricetus_auratus
ENSELUG00000001558	polr3f	100	88.924	ENSMICG00000044519	POLR3F	100	88.924	Microcebus_murinus
ENSELUG00000001558	polr3f	100	88.608	ENSMOCG00000018352	Polr3f	100	88.608	Microtus_ochrogaster
ENSELUG00000001558	polr3f	94	93.603	ENSMMOG00000018477	polr3f	100	93.603	Mola_mola
ENSELUG00000001558	polr3f	100	88.924	ENSMODG00000005624	POLR3F	100	88.924	Monodelphis_domestica
ENSELUG00000001558	polr3f	100	91.456	ENSMALG00000006685	polr3f	100	91.456	Monopterus_albus
ENSELUG00000001558	polr3f	100	87.975	MGP_CAROLIEiJ_G0024385	Polr3f	100	87.975	Mus_caroli
ENSELUG00000001558	polr3f	100	87.975	ENSMUSG00000027427	Polr3f	100	87.975	Mus_musculus
ENSELUG00000001558	polr3f	100	87.975	MGP_PahariEiJ_G0025829	Polr3f	100	87.975	Mus_pahari
ENSELUG00000001558	polr3f	100	87.975	MGP_SPRETEiJ_G0025304	Polr3f	100	87.975	Mus_spretus
ENSELUG00000001558	polr3f	100	68.615	ENSMPUG00000001252	-	100	68.615	Mustela_putorius_furo
ENSELUG00000001558	polr3f	100	88.924	ENSMLUG00000014844	POLR3F	100	88.924	Myotis_lucifugus
ENSELUG00000001558	polr3f	100	87.658	ENSNGAG00000010898	Polr3f	100	87.658	Nannospalax_galili
ENSELUG00000001558	polr3f	100	92.405	ENSNBRG00000020796	polr3f	100	92.405	Neolamprologus_brichardi
ENSELUG00000001558	polr3f	100	89.241	ENSNLEG00000009778	POLR3F	100	89.241	Nomascus_leucogenys
ENSELUG00000001558	polr3f	94	84.068	ENSMEUG00000010320	POLR3F	100	84.068	Notamacropus_eugenii
ENSELUG00000001558	polr3f	100	87.342	ENSOPRG00000003385	POLR3F	100	87.342	Ochotona_princeps
ENSELUG00000001558	polr3f	100	89.241	ENSODEG00000011521	POLR3F	100	89.241	Octodon_degus
ENSELUG00000001558	polr3f	100	90.506	ENSONIG00000006858	polr3f	100	90.506	Oreochromis_niloticus
ENSELUG00000001558	polr3f	100	88.608	ENSOANG00000001253	POLR3F	100	88.608	Ornithorhynchus_anatinus
ENSELUG00000001558	polr3f	100	89.241	ENSOCUG00000015067	POLR3F	100	89.241	Oryctolagus_cuniculus
ENSELUG00000001558	polr3f	100	87.658	ENSORLG00000022412	polr3f	100	87.658	Oryzias_latipes
ENSELUG00000001558	polr3f	100	87.658	ENSORLG00020021944	polr3f	100	87.658	Oryzias_latipes_hni
ENSELUG00000001558	polr3f	100	87.975	ENSOGAG00000002916	POLR3F	100	87.975	Otolemur_garnettii
ENSELUG00000001558	polr3f	100	55.063	ENSOARG00000008647	-	100	55.063	Ovis_aries
ENSELUG00000001558	polr3f	100	88.608	ENSOARG00000000315	-	100	88.608	Ovis_aries
ENSELUG00000001558	polr3f	100	89.241	ENSPPAG00000036681	POLR3F	100	89.241	Pan_paniscus
ENSELUG00000001558	polr3f	100	88.924	ENSPPRG00000024604	POLR3F	100	88.924	Panthera_pardus
ENSELUG00000001558	polr3f	100	88.924	ENSPTIG00000020292	POLR3F	100	88.924	Panthera_tigris_altaica
ENSELUG00000001558	polr3f	100	89.241	ENSPTRG00000013287	POLR3F	100	89.241	Pan_troglodytes
ENSELUG00000001558	polr3f	100	88.924	ENSPANG00000025015	POLR3F	100	88.924	Papio_anubis
ENSELUG00000001558	polr3f	100	93.631	ENSPKIG00000004427	polr3f	100	93.631	Paramormyrops_kingsleyae
ENSELUG00000001558	polr3f	88	90.909	ENSPSIG00000016613	POLR3F	100	90.909	Pelodiscus_sinensis
ENSELUG00000001558	polr3f	100	55.799	ENSPMGG00000018350	polr3f	100	59.494	Periophthalmus_magnuspinnatus
ENSELUG00000001558	polr3f	100	88.924	ENSPEMG00000006966	Polr3f	100	88.924	Peromyscus_maniculatus_bairdii
ENSELUG00000001558	polr3f	100	79.936	ENSPMAG00000005530	polr3f	100	79.936	Petromyzon_marinus
ENSELUG00000001558	polr3f	100	88.608	ENSPCIG00000000908	POLR3F	85	88.608	Phascolarctos_cinereus
ENSELUG00000001558	polr3f	100	90.190	ENSPFOG00000018334	polr3f	100	90.190	Poecilia_formosa
ENSELUG00000001558	polr3f	100	90.190	ENSPLAG00000021803	polr3f	100	90.190	Poecilia_latipinna
ENSELUG00000001558	polr3f	100	90.190	ENSPMEG00000013150	polr3f	100	90.190	Poecilia_mexicana
ENSELUG00000001558	polr3f	100	90.190	ENSPREG00000005278	polr3f	100	90.190	Poecilia_reticulata
ENSELUG00000001558	polr3f	100	89.241	ENSPPYG00000010737	POLR3F	100	89.241	Pongo_abelii
ENSELUG00000001558	polr3f	66	91.892	ENSPCAG00000004893	POLR3F	70	91.892	Procavia_capensis
ENSELUG00000001558	polr3f	100	88.924	ENSPCOG00000004543	POLR3F	100	88.924	Propithecus_coquereli
ENSELUG00000001558	polr3f	100	88.608	ENSPVAG00000000403	POLR3F	100	88.608	Pteropus_vampyrus
ENSELUG00000001558	polr3f	100	92.089	ENSPNYG00000016276	polr3f	100	92.089	Pundamilia_nyererei
ENSELUG00000001558	polr3f	100	96.178	ENSPNAG00000005164	polr3f	100	96.178	Pygocentrus_nattereri
ENSELUG00000001558	polr3f	100	88.291	ENSRNOG00000007548	Polr3f	85	88.291	Rattus_norvegicus
ENSELUG00000001558	polr3f	100	88.924	ENSRBIG00000021268	POLR3F	100	88.924	Rhinopithecus_bieti
ENSELUG00000001558	polr3f	100	88.924	ENSRROG00000039911	POLR3F	100	88.924	Rhinopithecus_roxellana
ENSELUG00000001558	polr3f	62	30.049	YNR003C	RPC34	56	32.402	Saccharomyces_cerevisiae
ENSELUG00000001558	polr3f	100	89.241	ENSSBOG00000018207	POLR3F	100	89.241	Saimiri_boliviensis_boliviensis
ENSELUG00000001558	polr3f	100	71.651	ENSSHAG00000018160	POLR3F	100	71.340	Sarcophilus_harrisii
ENSELUG00000001558	polr3f	100	94.586	ENSSFOG00015022433	polr3f	100	94.586	Scleropages_formosus
ENSELUG00000001558	polr3f	100	90.823	ENSSMAG00000021029	polr3f	100	90.823	Scophthalmus_maximus
ENSELUG00000001558	polr3f	100	81.646	ENSSDUG00000022435	polr3f	100	81.646	Seriola_dumerili
ENSELUG00000001558	polr3f	100	92.722	ENSSLDG00000012761	polr3f	100	92.722	Seriola_lalandi_dorsalis
ENSELUG00000001558	polr3f	100	81.329	ENSSARG00000006039	POLR3F	100	81.329	Sorex_araneus
ENSELUG00000001558	polr3f	100	88.217	ENSSPUG00000001873	POLR3F	100	88.217	Sphenodon_punctatus
ENSELUG00000001558	polr3f	100	83.228	ENSSPAG00000002092	polr3f	100	83.228	Stegastes_partitus
ENSELUG00000001558	polr3f	100	88.608	ENSSSCG00000007095	POLR3F	100	93.103	Sus_scrofa
ENSELUG00000001558	polr3f	100	90.127	ENSTGUG00000005839	POLR3F	100	90.127	Taeniopygia_guttata
ENSELUG00000001558	polr3f	100	89.557	ENSTRUG00000012101	polr3f	100	89.557	Takifugu_rubripes
ENSELUG00000001558	polr3f	100	88.924	ENSTNIG00000006456	polr3f	100	88.924	Tetraodon_nigroviridis
ENSELUG00000001558	polr3f	100	72.468	ENSTBEG00000007921	POLR3F	100	72.468	Tupaia_belangeri
ENSELUG00000001558	polr3f	100	88.608	ENSTTRG00000002580	POLR3F	100	88.608	Tursiops_truncatus
ENSELUG00000001558	polr3f	53	90.964	ENSUAMG00000024166	POLR3F	100	90.964	Ursus_americanus
ENSELUG00000001558	polr3f	100	88.608	ENSUMAG00000024944	POLR3F	100	88.608	Ursus_maritimus
ENSELUG00000001558	polr3f	100	88.608	ENSVPAG00000009063	POLR3F	100	88.608	Vicugna_pacos
ENSELUG00000001558	polr3f	100	88.608	ENSVVUG00000012925	POLR3F	100	88.608	Vulpes_vulpes
ENSELUG00000001558	polr3f	100	87.898	ENSXETG00000024898	polr3f	100	87.898	Xenopus_tropicalis
ENSELUG00000001558	polr3f	88	92.000	ENSXCOG00000010301	polr3f	100	92.000	Xiphophorus_couchianus
ENSELUG00000001558	polr3f	100	89.873	ENSXMAG00000004604	polr3f	100	89.873	Xiphophorus_maculatus