EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000001756 (Gene tree)
Gene ID: 105007005
Gene Symbol: bms1
Alias: bms1l|im:7152071|wu:fb37d08
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 43253 bases
Position: chrAZJR03000631.1:209356-252608
Accession: 105007005
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000026015	AARP2CN	PF08142.12	3.2e-30	1	1
ENSELUP00000000146	AARP2CN	PF08142.12	4.9e-30	1	1
ENSELUP00000000143	AARP2CN	PF08142.12	5.5e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000019585	-	5922	XM_010865756	ENSELUP00000000146	1226 (aa)	XP_010864058	UPI000577E565
ENSELUT00000019584	-	6812	-	ENSELUP00000000143	1167 (aa)	-	-
ENSELUT00000019586	-	1635	-	ENSELUP00000026015	483 (aa)	-	-

Gene Model

Click here to download ENSELUG00000001756's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000001756's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000001756	bms1	95	66.541	ENSG00000165733	BMS1	89	66.793	Homo_sapiens
ENSELUG00000001756	bms1	72	88.286	ENSAPOG00000020157	-	99	85.714	Acanthochromis_polyacanthus
ENSELUG00000001756	bms1	52	86.957	ENSAPOG00000016107	-	78	86.254	Acanthochromis_polyacanthus
ENSELUG00000001756	bms1	75	79.426	ENSAPOG00000002296	bms1	100	72.187	Acanthochromis_polyacanthus
ENSELUG00000001756	bms1	94	67.483	ENSAMEG00000016834	BMS1	89	67.241	Ailuropoda_melanoleuca
ENSELUG00000001756	bms1	97	72.419	ENSACIG00000002588	bms1	100	71.372	Amphilophus_citrinellus
ENSELUG00000001756	bms1	74	87.989	ENSAOCG00000018088	bms1	100	74.394	Amphiprion_ocellaris
ENSELUG00000001756	bms1	72	89.143	ENSAPEG00000014673	bms1	100	74.293	Amphiprion_percula
ENSELUG00000001756	bms1	100	72.713	ENSATEG00000023465	bms1	100	74.157	Anabas_testudineus
ENSELUG00000001756	bms1	98	62.745	ENSAPLG00000003759	BMS1	88	70.690	Anas_platyrhynchos
ENSELUG00000001756	bms1	52	80.545	ENSACAG00000000125	-	98	80.545	Anolis_carolinensis
ENSELUG00000001756	bms1	99	66.284	ENSACAG00000004537	-	86	73.103	Anolis_carolinensis
ENSELUG00000001756	bms1	93	68.525	ENSANAG00000023432	BMS1	91	66.144	Aotus_nancymaae
ENSELUG00000001756	bms1	99	72.869	ENSACLG00000001294	bms1	100	71.948	Astatotilapia_calliptera
ENSELUG00000001756	bms1	76	84.282	ENSAMXG00000011236	bms1	100	71.339	Astyanax_mexicanus
ENSELUG00000001756	bms1	94	67.483	ENSBTAG00000012878	BMS1	89	66.603	Bos_taurus
ENSELUG00000001756	bms1	79	56.749	WBGene00022021	Y61A9LA.10	95	56.749	Caenorhabditis_elegans
ENSELUG00000001756	bms1	93	69.245	ENSCJAG00000021705	BMS1	88	67.576	Callithrix_jacchus
ENSELUG00000001756	bms1	94	67.888	ENSCAFG00000007114	BMS1	83	73.589	Canis_familiaris
ENSELUG00000001756	bms1	94	67.888	ENSCAFG00020025282	BMS1	83	73.589	Canis_lupus_dingo
ENSELUG00000001756	bms1	94	67.657	ENSCHIG00000023251	BMS1	89	67.173	Capra_hircus
ENSELUG00000001756	bms1	99	57.826	ENSCAPG00000008652	BMS1	89	65.275	Cavia_aperea
ENSELUG00000001756	bms1	99	61.343	ENSCPOG00000000502	BMS1	89	66.197	Cavia_porcellus
ENSELUG00000001756	bms1	94	57.008	ENSCCAG00000024969	-	88	57.008	Cebus_capucinus
ENSELUG00000001756	bms1	92	69.245	ENSCATG00000030625	-	88	68.218	Cercocebus_atys
ENSELUG00000001756	bms1	93	46.615	ENSCATG00000008695	-	72	56.842	Cercocebus_atys
ENSELUG00000001756	bms1	93	66.979	ENSCLAG00000002446	BMS1	89	65.974	Chinchilla_lanigera
ENSELUG00000001756	bms1	93	69.424	ENSCSAG00000011118	BMS1	90	67.737	Chlorocebus_sabaeus
ENSELUG00000001756	bms1	99	61.479	ENSCHOG00000011055	BMS1	99	61.857	Choloepus_hoffmanni
ENSELUG00000001756	bms1	94	69.649	ENSCPBG00000025581	BMS1	87	69.793	Chrysemys_picta_bellii
ENSELUG00000001756	bms1	83	61.463	ENSCING00000003181	-	99	61.823	Ciona_intestinalis
ENSELUG00000001756	bms1	67	61.491	ENSCSAVG00000004113	-	87	52.448	Ciona_savignyi
ENSELUG00000001756	bms1	92	70.504	ENSCANG00000011609	BMS1	88	68.218	Colobus_angolensis_palliatus
ENSELUG00000001756	bms1	98	66.473	ENSCGRG00001019461	Bms1	92	65.595	Cricetulus_griseus_chok1gshd
ENSELUG00000001756	bms1	98	66.473	ENSCGRG00000009016	Bms1	91	65.595	Cricetulus_griseus_crigri
ENSELUG00000001756	bms1	99	71.533	ENSCSEG00000002469	bms1	99	71.303	Cynoglossus_semilaevis
ENSELUG00000001756	bms1	72	89.143	ENSCVAG00000008371	bms1	100	73.458	Cyprinodon_variegatus
ENSELUG00000001756	bms1	99	71.014	ENSDARG00000054154	bms1	99	72.240	Danio_rerio
ENSELUG00000001756	bms1	95	68.411	ENSDNOG00000015761	BMS1	92	68.561	Dasypus_novemcinctus
ENSELUG00000001756	bms1	97	66.981	ENSDORG00000002982	Bms1	91	66.667	Dipodomys_ordii
ENSELUG00000001756	bms1	80	62.803	FBgn0036686	CG7728	94	60.149	Drosophila_melanogaster
ENSELUG00000001756	bms1	89	64.286	ENSETEG00000009554	BMS1	63	64.559	Echinops_telfairi
ENSELUG00000001756	bms1	94	66.437	ENSEASG00005006894	BMS1	90	66.793	Equus_asinus_asinus
ENSELUG00000001756	bms1	95	66.792	ENSECAG00000001358	BMS1	90	66.793	Equus_caballus
ENSELUG00000001756	bms1	99	67.675	ENSFCAG00000011220	BMS1	89	67.429	Felis_catus
ENSELUG00000001756	bms1	95	70.016	ENSFALG00000006882	BMS1	88	68.673	Ficedula_albicollis
ENSELUG00000001756	bms1	99	60.016	ENSFDAG00000001422	BMS1	91	65.655	Fukomys_damarensis
ENSELUG00000001756	bms1	97	73.099	ENSFHEG00000003367	bms1	100	73.333	Fundulus_heteroclitus
ENSELUG00000001756	bms1	99	69.167	ENSGMOG00000000718	bms1	94	81.127	Gadus_morhua
ENSELUG00000001756	bms1	94	69.048	ENSGALG00000002624	BMS1	88	68.976	Gallus_gallus
ENSELUG00000001756	bms1	72	88.571	ENSGAFG00000009067	bms1	91	81.963	Gambusia_affinis
ENSELUG00000001756	bms1	98	75.633	ENSGACG00000015334	bms1	89	75.000	Gasterosteus_aculeatus
ENSELUG00000001756	bms1	95	69.169	ENSGAGG00000003467	BMS1	99	68.720	Gopherus_agassizii
ENSELUG00000001756	bms1	99	73.537	ENSHBUG00000022628	bms1	100	72.632	Haplochromis_burtoni
ENSELUG00000001756	bms1	96	66.241	ENSHGLG00000000477	BMS1	90	66.157	Heterocephalus_glaber_female
ENSELUG00000001756	bms1	95	66.960	ENSHGLG00100002176	BMS1	90	66.157	Heterocephalus_glaber_male
ENSELUG00000001756	bms1	99	71.394	ENSHCOG00000017604	bms1	99	70.612	Hippocampus_comes
ENSELUG00000001756	bms1	99	70.268	ENSIPUG00000017855	bms1	99	71.565	Ictalurus_punctatus
ENSELUG00000001756	bms1	96	68.242	ENSSTOG00000015063	BMS1	90	68.321	Ictidomys_tridecemlineatus
ENSELUG00000001756	bms1	93	68.662	ENSJJAG00000017328	Bms1	89	66.034	Jaculus_jaculus
ENSELUG00000001756	bms1	75	85.440	ENSKMAG00000021982	bms1	96	65.309	Kryptolebias_marmoratus
ENSELUG00000001756	bms1	76	84.511	ENSLBEG00000028208	bms1	99	73.242	Labrus_bergylta
ENSELUG00000001756	bms1	99	58.792	ENSLACG00000001600	BMS1	94	57.903	Latimeria_chalumnae
ENSELUG00000001756	bms1	77	77.403	ENSLOCG00000012914	bms1	99	73.015	Lepisosteus_oculatus
ENSELUG00000001756	bms1	95	66.899	ENSLAFG00000006250	BMS1	88	66.475	Loxodonta_africana
ENSELUG00000001756	bms1	76	78.862	ENSMFAG00000037771	BMS1	99	67.050	Macaca_fascicularis
ENSELUG00000001756	bms1	88	62.231	ENSMMUG00000007426	-	91	57.633	Macaca_mulatta
ENSELUG00000001756	bms1	79	54.854	ENSMLEG00000029084	-	79	55.147	Mandrillus_leucophaeus
ENSELUG00000001756	bms1	99	72.033	ENSMAMG00000020855	bms1	99	71.870	Mastacembelus_armatus
ENSELUG00000001756	bms1	99	72.787	ENSMZEG00005005663	bms1	100	71.867	Maylandia_zebra
ENSELUG00000001756	bms1	64	81.613	ENSMGAG00000001170	BMS1	92	67.462	Meleagris_gallopavo
ENSELUG00000001756	bms1	98	61.443	ENSMAUG00000002195	Bms1	85	73.363	Mesocricetus_auratus
ENSELUG00000001756	bms1	96	66.729	ENSMICG00000009977	BMS1	90	66.792	Microcebus_murinus
ENSELUG00000001756	bms1	96	66.797	ENSMOCG00000002038	Bms1	91	66.926	Microtus_ochrogaster
ENSELUG00000001756	bms1	97	71.667	ENSMMOG00000000977	bms1	100	70.526	Mola_mola
ENSELUG00000001756	bms1	95	67.722	ENSMODG00000001177	BMS1	82	74.324	Monodelphis_domestica
ENSELUG00000001756	bms1	99	73.420	ENSMALG00000009680	bms1	99	73.096	Monopterus_albus
ENSELUG00000001756	bms1	71	80.115	MGP_CAROLIEiJ_G0028785	-	77	76.039	Mus_caroli
ENSELUG00000001756	bms1	98	61.304	ENSMUSG00000030138	Bms1	84	73.363	Mus_musculus
ENSELUG00000001756	bms1	91	68.705	MGP_PahariEiJ_G0022539	Bms1	91	66.098	Mus_pahari
ENSELUG00000001756	bms1	98	66.667	MGP_SPRETEiJ_G0029816	Bms1	84	73.138	Mus_spretus
ENSELUG00000001756	bms1	94	68.357	ENSMPUG00000017276	BMS1	92	66.793	Mustela_putorius_furo
ENSELUG00000001756	bms1	99	61.514	ENSMLUG00000003260	BMS1	92	64.263	Myotis_lucifugus
ENSELUG00000001756	bms1	89	67.308	ENSNGAG00000015258	Bms1	85	66.144	Nannospalax_galili
ENSELUG00000001756	bms1	72	87.429	ENSNBRG00000023627	bms1	98	81.406	Neolamprologus_brichardi
ENSELUG00000001756	bms1	92	67.626	ENSNLEG00000015791	BMS1	87	66.793	Nomascus_leucogenys
ENSELUG00000001756	bms1	84	75.904	ENSOPRG00000005195	BMS1	80	77.017	Ochotona_princeps
ENSELUG00000001756	bms1	96	66.318	ENSODEG00000005554	BMS1	89	66.541	Octodon_degus
ENSELUG00000001756	bms1	100	72.263	ENSONIG00000007227	bms1	100	71.867	Oreochromis_niloticus
ENSELUG00000001756	bms1	92	69.573	ENSOANG00000000662	-	88	68.088	Ornithorhynchus_anatinus
ENSELUG00000001756	bms1	92	69.784	ENSOCUG00000005354	BMS1	89	66.923	Oryctolagus_cuniculus
ENSELUG00000001756	bms1	74	88.022	ENSORLG00000014655	bms1	99	73.115	Oryzias_latipes
ENSELUG00000001756	bms1	74	87.744	ENSORLG00020016246	bms1	99	71.906	Oryzias_latipes_hni
ENSELUG00000001756	bms1	74	88.022	ENSORLG00015014183	bms1	99	71.117	Oryzias_latipes_hsok
ENSELUG00000001756	bms1	76	86.649	ENSOMEG00000015042	bms1	99	73.295	Oryzias_melastigma
ENSELUG00000001756	bms1	94	66.841	ENSOGAG00000006511	BMS1	92	66.794	Otolemur_garnettii
ENSELUG00000001756	bms1	94	67.657	ENSOARG00000003900	BMS1	89	66.667	Ovis_aries
ENSELUG00000001756	bms1	95	66.353	ENSPPAG00000027837	BMS1	89	66.603	Pan_paniscus
ENSELUG00000001756	bms1	99	67.736	ENSPPRG00000001311	BMS1	89	67.238	Panthera_pardus
ENSELUG00000001756	bms1	99	67.297	ENSPTIG00000009652	BMS1	89	67.748	Panthera_tigris_altaica
ENSELUG00000001756	bms1	95	66.165	ENSPTRG00000002441	BMS1	89	66.414	Pan_troglodytes
ENSELUG00000001756	bms1	93	75.159	ENSPKIG00000008165	bms1	86	75.238	Paramormyrops_kingsleyae
ENSELUG00000001756	bms1	94	67.901	ENSPSIG00000006481	BMS1	89	67.169	Pelodiscus_sinensis
ENSELUG00000001756	bms1	74	85.515	ENSPMGG00000012075	bms1	97	85.139	Periophthalmus_magnuspinnatus
ENSELUG00000001756	bms1	98	67.188	ENSPEMG00000022467	Bms1	90	67.241	Peromyscus_maniculatus_bairdii
ENSELUG00000001756	bms1	87	76.056	ENSPCIG00000001339	BMS1	98	72.394	Phascolarctos_cinereus
ENSELUG00000001756	bms1	92	76.812	ENSPFOG00000015180	bms1	99	70.293	Poecilia_formosa
ENSELUG00000001756	bms1	72	88.000	ENSPLAG00000007150	bms1	86	72.587	Poecilia_latipinna
ENSELUG00000001756	bms1	99	71.854	ENSPMEG00000023176	bms1	94	71.545	Poecilia_mexicana
ENSELUG00000001756	bms1	99	71.736	ENSPREG00000002695	bms1	99	71.638	Poecilia_reticulata
ENSELUG00000001756	bms1	76	78.320	ENSPPYG00000002836	-	82	66.603	Pongo_abelii
ENSELUG00000001756	bms1	76	78.320	ENSPCAG00000014528	BMS1	64	72.686	Procavia_capensis
ENSELUG00000001756	bms1	90	67.447	ENSPCOG00000023834	-	93	62.428	Propithecus_coquereli
ENSELUG00000001756	bms1	99	61.998	ENSPVAG00000000725	BMS1	89	66.034	Pteropus_vampyrus
ENSELUG00000001756	bms1	99	72.877	ENSPNYG00000018866	bms1	100	71.694	Pundamilia_nyererei
ENSELUG00000001756	bms1	76	85.946	ENSPNAG00000000676	bms1	100	71.966	Pygocentrus_nattereri
ENSELUG00000001756	bms1	73	78.711	ENSRNOG00000006576	Bms1	88	66.106	Rattus_norvegicus
ENSELUG00000001756	bms1	92	70.144	ENSRROG00000040101	BMS1	86	70.378	Rhinopithecus_roxellana
ENSELUG00000001756	bms1	71	52.394	YPL217C	-	79	47.319	Saccharomyces_cerevisiae
ENSELUG00000001756	bms1	96	69.424	ENSSBOG00000035778	BMS1	88	67.737	Saimiri_boliviensis_boliviensis
ENSELUG00000001756	bms1	98	64.103	ENSSHAG00000005062	BMS1	83	74.324	Sarcophilus_harrisii
ENSELUG00000001756	bms1	84	80.285	ENSSFOG00015022313	bms1	99	71.092	Scleropages_formosus
ENSELUG00000001756	bms1	100	71.815	ENSSMAG00000019966	bms1	100	71.895	Scophthalmus_maximus
ENSELUG00000001756	bms1	75	89.560	ENSSDUG00000016875	bms1	99	73.494	Seriola_dumerili
ENSELUG00000001756	bms1	75	89.835	ENSSLDG00000015199	bms1	99	72.997	Seriola_lalandi_dorsalis
ENSELUG00000001756	bms1	66	65.692	ENSSARG00000014407	BMS1	68	78.000	Sorex_araneus
ENSELUG00000001756	bms1	97	69.823	ENSSPUG00000014454	BMS1	88	69.182	Sphenodon_punctatus
ENSELUG00000001756	bms1	94	68.366	ENSSSCG00000010198	BMS1	89	67.235	Sus_scrofa
ENSELUG00000001756	bms1	93	70.128	ENSTGUG00000006302	-	88	68.567	Taeniopygia_guttata
ENSELUG00000001756	bms1	97	68.399	ENSTRUG00000008028	bms1	99	67.102	Takifugu_rubripes
ENSELUG00000001756	bms1	99	64.799	ENSTNIG00000006216	bms1	83	78.522	Tetraodon_nigroviridis
ENSELUG00000001756	bms1	63	71.141	ENSTBEG00000001673	-	63	66.667	Tupaia_belangeri
ENSELUG00000001756	bms1	95	66.952	ENSTTRG00000007983	BMS1	82	77.995	Tursiops_truncatus
ENSELUG00000001756	bms1	94	68.881	ENSUAMG00000023996	BMS1	89	67.398	Ursus_americanus
ENSELUG00000001756	bms1	94	68.706	ENSUMAG00000016523	BMS1	89	67.085	Ursus_maritimus
ENSELUG00000001756	bms1	73	75.401	ENSVPAG00000007477	BMS1	80	71.655	Vicugna_pacos
ENSELUG00000001756	bms1	95	66.919	ENSVVUG00000021305	BMS1	99	62.392	Vulpes_vulpes
ENSELUG00000001756	bms1	99	62.072	ENSXETG00000008158	bms1	94	62.393	Xenopus_tropicalis
ENSELUG00000001756	bms1	99	71.888	ENSXCOG00000000506	bms1	94	86.398	Xiphophorus_couchianus
ENSELUG00000001756	bms1	72	88.571	ENSXMAG00000014236	bms1	99	71.814	Xiphophorus_maculatus