EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000001870 (Gene tree)
Gene ID: 105030110
Gene Symbol: -
Alias: -
Full Name: poly(rC)-binding protein 4
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 47284 bases
Position: chrLG12:26573294-26620577
Accession: 105030110
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000026112	KH_1	PF00013.29	1.8e-51	1	3
ENSELUP00000026112	KH_1	PF00013.29	1.8e-51	2	3
ENSELUP00000026112	KH_1	PF00013.29	1.8e-51	3	3
ENSELUP00000000263	KH_1	PF00013.29	9.9e-37	1	2
ENSELUP00000000263	KH_1	PF00013.29	9.9e-37	2	2
ENSELUP00000026112	KH_2	PF07650.17	1.1e-14	1	1
ENSELUP00000000263	KH_2	PF07650.17	2.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000019361	-	2845	XM_010903774	ENSELUP00000026112	463 (aa)	XP_010902076	UPI000661DB91
ENSELUT00000019363	-	1149	-	ENSELUP00000000263	382 (aa)	-	-

Gene Model

Click here to download ENSELUG00000001870's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000001870's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000001870	-	98	56.652	ENSELUG00000019784	zgc:110045	100	56.652
ENSELUG00000001870	-	50	40.625	ENSELUG00000007990	fubp1	58	33.010
ENSELUG00000001870	-	73	59.259	ENSELUG00000010754	PCBP2	98	59.259
ENSELUG00000001870	-	50	36.486	ENSELUG00000008445	-	63	36.486
ENSELUG00000001870	-	69	31.944	ENSELUG00000013808	fubp3	66	31.944
ENSELUG00000001870	-	71	64.688	ENSELUG00000003521	pcbp3	93	64.688
ENSELUG00000001870	-	58	47.368	ENSELUG00000002820	hnrnpk	54	47.619
ENSELUG00000001870	-	52	46.667	ENSELUG00000004017	hnrpkl	56	46.970
ENSELUG00000001870	-	73	59.770	ENSELUG00000014427	pcbp2	98	59.770
ENSELUG00000001870	-	84	52.239	ENSELUG00000001560	-	97	58.074
ENSELUG00000001870	-	100	75.365	ENSELUG00000018204	pcbp4	100	75.992

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000001870	-	96	55.507	ENSG00000090097	PCBP4	97	74.233	Homo_sapiens
ENSELUG00000001870	-	100	87.257	ENSAPOG00000009897	-	100	87.257	Acanthochromis_polyacanthus
ENSELUG00000001870	-	95	55.955	ENSAMEG00000009211	PCBP4	97	56.600	Ailuropoda_melanoleuca
ENSELUG00000001870	-	94	71.765	ENSACIG00000015264	pcbp4	89	73.882	Amphilophus_citrinellus
ENSELUG00000001870	-	94	85.680	ENSACIG00000020434	-	100	86.874	Amphilophus_citrinellus
ENSELUG00000001870	-	94	62.814	ENSAOCG00000006924	-	100	65.352	Amphiprion_ocellaris
ENSELUG00000001870	-	98	82.080	ENSAOCG00000021366	-	100	83.186	Amphiprion_ocellaris
ENSELUG00000001870	-	94	73.872	ENSAPEG00000023157	pcbp4	100	75.059	Amphiprion_percula
ENSELUG00000001870	-	88	63.524	ENSAPEG00000009555	-	80	84.804	Amphiprion_percula
ENSELUG00000001870	-	98	82.895	ENSATEG00000006511	-	100	82.895	Anabas_testudineus
ENSELUG00000001870	-	89	67.548	ENSATEG00000008529	pcbp4	93	68.269	Anabas_testudineus
ENSELUG00000001870	-	97	59.382	ENSACAG00000011701	PCBP4	99	59.382	Anolis_carolinensis
ENSELUG00000001870	-	96	55.727	ENSANAG00000023072	PCBP4	99	56.360	Aotus_nancymaae
ENSELUG00000001870	-	100	87.257	ENSACLG00000025246	-	100	87.257	Astatotilapia_calliptera
ENSELUG00000001870	-	97	78.173	ENSACLG00000013348	pcbp4	100	70.158	Astatotilapia_calliptera
ENSELUG00000001870	-	100	78.602	ENSAMXG00000033125	pcbp4	100	79.661	Astyanax_mexicanus
ENSELUG00000001870	-	95	55.955	ENSBTAG00000018622	PCBP4	97	56.823	Bos_taurus
ENSELUG00000001870	-	96	55.947	ENSCJAG00000005783	PCBP4	99	56.579	Callithrix_jacchus
ENSELUG00000001870	-	95	55.955	ENSCAFG00000010019	PCBP4	97	56.600	Canis_familiaris
ENSELUG00000001870	-	95	55.955	ENSCAFG00020022361	PCBP4	97	56.600	Canis_lupus_dingo
ENSELUG00000001870	-	95	56.180	ENSCHIG00000012918	PCBP4	97	56.823	Capra_hircus
ENSELUG00000001870	-	95	56.404	ENSTSYG00000008765	PCBP4	97	57.047	Carlito_syrichta
ENSELUG00000001870	-	95	56.180	ENSCAPG00000005895	PCBP4	97	56.600	Cavia_aperea
ENSELUG00000001870	-	95	56.180	ENSCPOG00000014617	PCBP4	97	56.823	Cavia_porcellus
ENSELUG00000001870	-	96	55.947	ENSCCAG00000033268	PCBP4	99	56.579	Cebus_capucinus
ENSELUG00000001870	-	96	55.947	ENSCATG00000032034	PCBP4	99	56.579	Cercocebus_atys
ENSELUG00000001870	-	95	56.180	ENSCLAG00000008356	PCBP4	97	56.823	Chinchilla_lanigera
ENSELUG00000001870	-	96	55.947	ENSCSAG00000013913	PCBP4	99	56.579	Chlorocebus_sabaeus
ENSELUG00000001870	-	95	60.722	ENSCPBG00000016554	PCBP4	95	60.722	Chrysemys_picta_bellii
ENSELUG00000001870	-	96	55.947	ENSCANG00000038865	PCBP4	99	56.579	Colobus_angolensis_palliatus
ENSELUG00000001870	-	95	56.629	ENSCGRG00001014953	Pcbp4	97	57.271	Cricetulus_griseus_chok1gshd
ENSELUG00000001870	-	95	56.629	ENSCGRG00000008617	Pcbp4	97	57.271	Cricetulus_griseus_crigri
ENSELUG00000001870	-	98	76.652	ENSCSEG00000021041	PCBP4	100	76.652	Cynoglossus_semilaevis
ENSELUG00000001870	-	98	69.375	ENSCSEG00000014487	pcbp4	95	70.833	Cynoglossus_semilaevis
ENSELUG00000001870	-	94	65.741	ENSCVAG00000003674	pcbp4	99	66.852	Cyprinodon_variegatus
ENSELUG00000001870	-	100	86.177	ENSCVAG00000013090	-	100	86.177	Cyprinodon_variegatus
ENSELUG00000001870	-	100	78.723	ENSDARG00000024276	pcbp4	100	79.241	Danio_rerio
ENSELUG00000001870	-	92	77.778	ENSDNOG00000033951	PCBP4	87	77.778	Dasypus_novemcinctus
ENSELUG00000001870	-	95	56.404	ENSDORG00000000573	Pcbp4	97	57.047	Dipodomys_ordii
ENSELUG00000001870	-	66	56.507	ENSETEG00000001778	PCBP4	98	56.507	Echinops_telfairi
ENSELUG00000001870	-	95	55.506	ENSEASG00005012889	PCBP4	97	56.376	Equus_asinus_asinus
ENSELUG00000001870	-	95	55.506	ENSECAG00000024218	PCBP4	97	56.376	Equus_caballus
ENSELUG00000001870	-	95	55.955	ENSFCAG00000009148	PCBP4	97	56.600	Felis_catus
ENSELUG00000001870	-	94	57.931	ENSFALG00000008831	PCBP4	95	58.124	Ficedula_albicollis
ENSELUG00000001870	-	95	56.404	ENSFDAG00000012692	PCBP4	100	54.706	Fukomys_damarensis
ENSELUG00000001870	-	94	63.133	ENSFHEG00000002769	-	99	62.400	Fundulus_heteroclitus
ENSELUG00000001870	-	98	82.379	ENSGMOG00000017799	-	100	82.379	Gadus_morhua
ENSELUG00000001870	-	95	57.788	ENSGALG00000027695	PCBP4	97	58.014	Gallus_gallus
ENSELUG00000001870	-	80	88.679	ENSGAFG00000021090	-	78	88.679	Gambusia_affinis
ENSELUG00000001870	-	51	86.667	ENSGAFG00000018301	pcbp4	63	86.755	Gambusia_affinis
ENSELUG00000001870	-	98	83.628	ENSGACG00000002664	-	100	84.106	Gasterosteus_aculeatus
ENSELUG00000001870	-	95	61.400	ENSGAGG00000022116	PCBP4	95	61.400	Gopherus_agassizii
ENSELUG00000001870	-	96	55.286	ENSGGOG00000012474	PCBP4	99	56.140	Gorilla_gorilla
ENSELUG00000001870	-	100	87.257	ENSHBUG00000005329	-	100	87.257	Haplochromis_burtoni
ENSELUG00000001870	-	97	78.173	ENSHBUG00000009472	pcbp4	100	69.960	Haplochromis_burtoni
ENSELUG00000001870	-	95	56.629	ENSHGLG00000012018	PCBP4	97	57.271	Heterocephalus_glaber_female
ENSELUG00000001870	-	95	55.134	ENSHGLG00100008748	PCBP4	97	55.556	Heterocephalus_glaber_male
ENSELUG00000001870	-	100	80.603	ENSHCOG00000010838	-	97	92.357	Hippocampus_comes
ENSELUG00000001870	-	100	80.000	ENSIPUG00000008212	pcbp4	100	80.860	Ictalurus_punctatus
ENSELUG00000001870	-	95	54.607	ENSSTOG00000002573	PCBP4	89	63.580	Ictidomys_tridecemlineatus
ENSELUG00000001870	-	95	56.404	ENSJJAG00000016235	Pcbp4	97	57.047	Jaculus_jaculus
ENSELUG00000001870	-	100	86.177	ENSKMAG00000017554	-	100	86.177	Kryptolebias_marmoratus
ENSELUG00000001870	-	98	74.310	ENSKMAG00000014252	pcbp4	96	74.576	Kryptolebias_marmoratus
ENSELUG00000001870	-	100	86.177	ENSLBEG00000011345	-	100	86.177	Labrus_bergylta
ENSELUG00000001870	-	100	64.392	ENSLACG00000015899	PCBP4	98	73.707	Latimeria_chalumnae
ENSELUG00000001870	-	100	77.371	ENSLOCG00000013402	pcbp4	100	78.710	Lepisosteus_oculatus
ENSELUG00000001870	-	94	53.753	ENSLAFG00000010732	PCBP4	100	54.595	Loxodonta_africana
ENSELUG00000001870	-	96	55.947	ENSMFAG00000001431	PCBP4	99	56.579	Macaca_fascicularis
ENSELUG00000001870	-	96	55.947	ENSMMUG00000022205	PCBP4	94	62.952	Macaca_mulatta
ENSELUG00000001870	-	96	55.947	ENSMNEG00000028553	PCBP4	99	56.579	Macaca_nemestrina
ENSELUG00000001870	-	96	55.947	ENSMLEG00000027083	PCBP4	99	56.579	Mandrillus_leucophaeus
ENSELUG00000001870	-	100	87.257	ENSMAMG00000011364	-	100	87.257	Mastacembelus_armatus
ENSELUG00000001870	-	98	71.875	ENSMAMG00000010163	pcbp4	100	71.230	Mastacembelus_armatus
ENSELUG00000001870	-	100	87.257	ENSMZEG00005023631	-	100	87.257	Maylandia_zebra
ENSELUG00000001870	-	97	78.173	ENSMZEG00005008852	pcbp4	100	70.158	Maylandia_zebra
ENSELUG00000001870	-	68	65.946	ENSMGAG00000005091	-	85	74.194	Meleagris_gallopavo
ENSELUG00000001870	-	68	46.766	ENSMGAG00000003895	-	88	53.535	Meleagris_gallopavo
ENSELUG00000001870	-	95	56.629	ENSMAUG00000021064	Pcbp4	97	57.271	Mesocricetus_auratus
ENSELUG00000001870	-	95	56.404	ENSMICG00000002686	PCBP4	97	57.047	Microcebus_murinus
ENSELUG00000001870	-	95	56.629	ENSMOCG00000013557	Pcbp4	97	57.271	Microtus_ochrogaster
ENSELUG00000001870	-	70	64.865	ENSMMOG00000017756	pcbp4	98	64.865	Mola_mola
ENSELUG00000001870	-	98	80.973	ENSMMOG00000020533	-	100	80.973	Mola_mola
ENSELUG00000001870	-	95	57.111	ENSMODG00000011790	PCBP4	82	57.788	Monodelphis_domestica
ENSELUG00000001870	-	94	85.750	ENSMALG00000022117	-	100	85.146	Monopterus_albus
ENSELUG00000001870	-	89	76.739	ENSMALG00000020318	pcbp4	91	75.515	Monopterus_albus
ENSELUG00000001870	-	95	56.629	MGP_CAROLIEiJ_G0032623	Pcbp4	93	76.087	Mus_caroli
ENSELUG00000001870	-	95	56.629	ENSMUSG00000023495	Pcbp4	91	79.259	Mus_musculus
ENSELUG00000001870	-	95	56.629	MGP_PahariEiJ_G0015491	Pcbp4	93	76.087	Mus_pahari
ENSELUG00000001870	-	95	56.629	MGP_SPRETEiJ_G0033768	-	93	76.087	Mus_spretus
ENSELUG00000001870	-	95	55.955	ENSMPUG00000011766	PCBP4	97	56.600	Mustela_putorius_furo
ENSELUG00000001870	-	95	56.629	ENSNGAG00000013148	Pcbp4	97	57.271	Nannospalax_galili
ENSELUG00000001870	-	98	82.080	ENSNBRG00000015885	-	100	83.186	Neolamprologus_brichardi
ENSELUG00000001870	-	94	61.197	ENSNBRG00000007475	pcbp4	98	61.641	Neolamprologus_brichardi
ENSELUG00000001870	-	96	55.947	ENSNLEG00000007064	PCBP4	99	56.579	Nomascus_leucogenys
ENSELUG00000001870	-	88	50.508	ENSMEUG00000006917	PCBP4	95	51.015	Notamacropus_eugenii
ENSELUG00000001870	-	90	48.193	ENSOPRG00000008763	PCBP4	99	48.921	Ochotona_princeps
ENSELUG00000001870	-	95	56.180	ENSODEG00000018230	PCBP4	97	57.047	Octodon_degus
ENSELUG00000001870	-	95	56.561	ENSOANG00000014110	PCBP4	94	57.207	Ornithorhynchus_anatinus
ENSELUG00000001870	-	95	56.629	ENSOCUG00000025336	PCBP4	97	57.047	Oryctolagus_cuniculus
ENSELUG00000001870	-	98	81.678	ENSORLG00000009899	-	100	82.781	Oryzias_latipes
ENSELUG00000001870	-	98	70.564	ENSORLG00000003061	pcbp4	96	71.608	Oryzias_latipes
ENSELUG00000001870	-	100	85.961	ENSORLG00020001183	-	100	85.961	Oryzias_latipes_hni
ENSELUG00000001870	-	100	86.393	ENSORLG00015017819	-	100	86.393	Oryzias_latipes_hsok
ENSELUG00000001870	-	98	69.979	ENSORLG00015019262	pcbp4	96	70.807	Oryzias_latipes_hsok
ENSELUG00000001870	-	100	86.825	ENSOMEG00000011545	-	100	86.825	Oryzias_melastigma
ENSELUG00000001870	-	100	67.748	ENSOMEG00000003516	-	100	68.560	Oryzias_melastigma
ENSELUG00000001870	-	95	56.180	ENSOGAG00000032384	PCBP4	97	56.823	Otolemur_garnettii
ENSELUG00000001870	-	94	54.394	ENSOARG00000006603	PCBP4	100	55.083	Ovis_aries
ENSELUG00000001870	-	96	55.824	ENSPPAG00000038764	PCBP4	99	56.674	Pan_paniscus
ENSELUG00000001870	-	95	55.955	ENSPPRG00000006165	PCBP4	97	56.600	Panthera_pardus
ENSELUG00000001870	-	95	55.955	ENSPTIG00000005401	PCBP4	93	56.600	Panthera_tigris_altaica
ENSELUG00000001870	-	96	55.507	ENSPTRG00000014983	PCBP4	99	56.360	Pan_troglodytes
ENSELUG00000001870	-	96	55.947	ENSPANG00000026222	PCBP4	99	56.579	Papio_anubis
ENSELUG00000001870	-	100	73.707	ENSPKIG00000005487	-	100	73.707	Paramormyrops_kingsleyae
ENSELUG00000001870	-	100	77.586	ENSPKIG00000010244	pcbp4	100	78.664	Paramormyrops_kingsleyae
ENSELUG00000001870	-	82	54.598	ENSPSIG00000011286	PCBP4	96	57.143	Pelodiscus_sinensis
ENSELUG00000001870	-	98	77.042	ENSPMGG00000022732	-	100	77.483	Periophthalmus_magnuspinnatus
ENSELUG00000001870	-	94	70.824	ENSPMGG00000000063	pcbp4	99	71.059	Periophthalmus_magnuspinnatus
ENSELUG00000001870	-	95	56.629	ENSPEMG00000009276	Pcbp4	97	57.271	Peromyscus_maniculatus_bairdii
ENSELUG00000001870	-	95	57.562	ENSPCIG00000018151	PCBP4	93	58.014	Phascolarctos_cinereus
ENSELUG00000001870	-	95	68.722	ENSPFOG00000014474	pcbp4	96	80.315	Poecilia_formosa
ENSELUG00000001870	-	100	85.961	ENSPFOG00000002989	-	100	85.961	Poecilia_formosa
ENSELUG00000001870	-	94	67.876	ENSPLAG00000023316	pcbp4	89	70.207	Poecilia_latipinna
ENSELUG00000001870	-	79	79.235	ENSPLAG00000011438	-	98	79.235	Poecilia_latipinna
ENSELUG00000001870	-	61	60.133	ENSPMEG00000012990	pcbp4	100	63.123	Poecilia_mexicana
ENSELUG00000001870	-	54	91.071	ENSPREG00000021498	-	81	91.071	Poecilia_reticulata
ENSELUG00000001870	-	98	78.319	ENSPREG00000017370	-	100	78.319	Poecilia_reticulata
ENSELUG00000001870	-	96	55.947	ENSPPYG00000013822	PCBP4	99	56.579	Pongo_abelii
ENSELUG00000001870	-	88	50.676	ENSPCAG00000009515	PCBP4	98	51.365	Procavia_capensis
ENSELUG00000001870	-	95	56.404	ENSPCOG00000027535	PCBP4	97	57.047	Propithecus_coquereli
ENSELUG00000001870	-	88	47.629	ENSPVAG00000012474	PCBP4	98	47.761	Pteropus_vampyrus
ENSELUG00000001870	-	80	84.713	ENSPNYG00000019234	pcbp4	100	70.246	Pundamilia_nyererei
ENSELUG00000001870	-	98	82.080	ENSPNYG00000003098	-	100	83.186	Pundamilia_nyererei
ENSELUG00000001870	-	100	78.556	ENSPNAG00000025434	pcbp4	100	79.618	Pygocentrus_nattereri
ENSELUG00000001870	-	95	56.629	ENSRNOG00000012406	Pcbp4	97	57.271	Rattus_norvegicus
ENSELUG00000001870	-	96	55.947	ENSRBIG00000043793	PCBP4	99	56.579	Rhinopithecus_bieti
ENSELUG00000001870	-	96	55.947	ENSRROG00000034589	PCBP4	99	56.579	Rhinopithecus_roxellana
ENSELUG00000001870	-	96	55.947	ENSSBOG00000027029	PCBP4	99	56.579	Saimiri_boliviensis_boliviensis
ENSELUG00000001870	-	66	72.436	ENSSHAG00000007362	PCBP4	100	61.597	Sarcophilus_harrisii
ENSELUG00000001870	-	71	77.707	ENSSFOG00015008221	pcbp4	60	77.707	Scleropages_formosus
ENSELUG00000001870	-	100	73.605	ENSSFOG00015012075	PCBP4	100	74.249	Scleropages_formosus
ENSELUG00000001870	-	100	84.914	ENSSMAG00000009392	-	99	84.914	Scophthalmus_maximus
ENSELUG00000001870	-	98	70.711	ENSSMAG00000005827	pcbp4	95	72.671	Scophthalmus_maximus
ENSELUG00000001870	-	98	82.522	ENSSDUG00000015540	-	100	83.628	Seriola_dumerili
ENSELUG00000001870	-	94	73.923	ENSSDUG00000017719	pcbp4	97	74.940	Seriola_dumerili
ENSELUG00000001870	-	62	82.911	ENSSLDG00000024847	-	77	82.911	Seriola_lalandi_dorsalis
ENSELUG00000001870	-	98	82.522	ENSSLDG00000007851	-	100	83.628	Seriola_lalandi_dorsalis
ENSELUG00000001870	-	94	57.398	ENSSPUG00000000194	PCBP4	97	57.398	Sphenodon_punctatus
ENSELUG00000001870	-	100	86.825	ENSSPAG00000003033	-	100	86.825	Stegastes_partitus
ENSELUG00000001870	-	94	61.697	ENSSPAG00000019058	-	92	62.725	Stegastes_partitus
ENSELUG00000001870	-	95	55.730	ENSSSCG00000028446	PCBP4	97	56.600	Sus_scrofa
ENSELUG00000001870	-	70	56.442	ENSTGUG00000006393	PCBP4	96	57.055	Taeniopygia_guttata
ENSELUG00000001870	-	98	80.531	ENSTRUG00000007426	-	100	80.531	Takifugu_rubripes
ENSELUG00000001870	-	98	79.249	ENSTNIG00000017887	-	100	79.249	Tetraodon_nigroviridis
ENSELUG00000001870	-	80	37.923	ENSTBEG00000015770	PCBP4	100	38.702	Tupaia_belangeri
ENSELUG00000001870	-	72	53.448	ENSTTRG00000001443	PCBP4	83	51.977	Tursiops_truncatus
ENSELUG00000001870	-	95	51.392	ENSUAMG00000020871	PCBP4	100	52.742	Ursus_americanus
ENSELUG00000001870	-	86	57.073	ENSUMAG00000021609	PCBP4	91	56.835	Ursus_maritimus
ENSELUG00000001870	-	95	55.955	ENSVVUG00000026857	PCBP4	97	56.600	Vulpes_vulpes
ENSELUG00000001870	-	94	74.271	ENSXCOG00000000111	-	100	77.119	Xiphophorus_couchianus
ENSELUG00000001870	-	50	72.917	ENSXCOG00000017325	pcbp4	79	72.917	Xiphophorus_couchianus
ENSELUG00000001870	-	78	81.319	ENSXMAG00000015709	pcbp4	79	78.590	Xiphophorus_maculatus
ENSELUG00000001870	-	100	85.529	ENSXMAG00000024530	-	100	85.529	Xiphophorus_maculatus
ENSELUG00000001870	-	85	65.770	ENSXMAG00000022188	-	90	67.971	Xiphophorus_maculatus