EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSELUG00000001906 (Gene tree)
Gene ID
105013949
Gene Symbol
YTHDF1 (1 of many)
Alias
C20orf21|FLJ20391
Full Name
YTH domain-containing family protein 1
Gene Type
protein_coding
Species
Esox_lucius
Status
putative
Strand
Plus strand
Length
14112 bases
Position
chrLG12:26082676-26096787
Accession
105013949
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSELUP00000000296YTHPF04146.156.5e-4011
ENSELUP00000026131YTHPF04146.157.4e-4011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSELUT00000019303YTHDF1 (1 of many)-2021605-ENSELUP00000000296534 (aa)--
ENSELUT00000019300YTHDF1 (1 of many)-2012449XM_010875845ENSELUP00000026131665 (aa)XP_010874147-
Gene Model
Click here to download ENSELUG00000001906's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000001906's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSELUG00000001906YTHDF19661.792ENSELUG00000014824ythdf39957.835
ENSELUG00000001906YTHDF110077.601ENSELUG00000022768ythdf19976.364
ENSELUG00000001906YTHDF18482.474ENSELUG00000014969ythdf29781.592
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSELUG00000001906YTHDF19974.081ENSG00000149658YTHDF19474.081Homo_sapiens
ENSELUG00000001906YTHDF19677.905ENSAPOG00000004358ythdf19972.615Acanthochromis_polyacanthus
ENSELUG00000001906YTHDF19982.821ENSAPOG00000010796YTHDF19982.326Acanthochromis_polyacanthus
ENSELUG00000001906YTHDF19972.727ENSAMEG00000017323YTHDF19373.945Ailuropoda_melanoleuca
ENSELUG00000001906YTHDF19676.046ENSACIG00000011264ythdf19780.315Amphilophus_citrinellus
ENSELUG00000001906YTHDF19983.985ENSACIG00000020083YTHDF19482.117Amphilophus_citrinellus
ENSELUG00000001906YTHDF19983.022ENSAOCG00000012567YTHDF19981.988Amphiprion_ocellaris
ENSELUG00000001906YTHDF19677.905ENSAOCG00000022251ythdf19972.397Amphiprion_ocellaris
ENSELUG00000001906YTHDF19983.022ENSAPEG00000008750YTHDF19981.988Amphiprion_percula
ENSELUG00000001906YTHDF19674.635ENSAPEG00000021878ythdf19972.129Amphiprion_percula
ENSELUG00000001906YTHDF19677.438ENSATEG00000023840ythdf19971.692Anabas_testudineus
ENSELUG00000001906YTHDF19984.544ENSATEG00000005996YTHDF19981.832Anabas_testudineus
ENSELUG00000001906YTHDF19974.677ENSAPLG00000005985YTHDF19475.184Anas_platyrhynchos
ENSELUG00000001906YTHDF19974.539ENSACAG00000005560YTHDF19475.185Anolis_carolinensis
ENSELUG00000001906YTHDF19971.532ENSANAG00000034786-10073.485Aotus_nancymaae
ENSELUG00000001906YTHDF19960.223ENSANAG00000021022-9956.899Aotus_nancymaae
ENSELUG00000001906YTHDF19982.495ENSACLG00000025518YTHDF19981.153Astatotilapia_calliptera
ENSELUG00000001906YTHDF19971.875ENSBTAG00000010383YTHDF110071.780Bos_taurus
ENSELUG00000001906YTHDF19973.077ENSCJAG00000010056YTHDF19473.713Callithrix_jacchus
ENSELUG00000001906YTHDF19772.901ENSCAFG00000012772YTHDF19973.764Canis_familiaris
ENSELUG00000001906YTHDF19772.901ENSCAFG00020001214YTHDF19973.764Canis_lupus_dingo
ENSELUG00000001906YTHDF19971.691ENSCHIG00000026494YTHDF19571.507Capra_hircus
ENSELUG00000001906YTHDF19972.963ENSTSYG00000033436YTHDF19471.841Carlito_syrichta
ENSELUG00000001906YTHDF19970.872ENSCAPG00000002544YTHDF19072.007Cavia_aperea
ENSELUG00000001906YTHDF19971.667ENSCPOG00000010202YTHDF19472.794Cavia_porcellus
ENSELUG00000001906YTHDF19973.013ENSCCAG00000024650YTHDF19473.897Cebus_capucinus
ENSELUG00000001906YTHDF19972.072ENSCATG00000033272YTHDF19474.265Cercocebus_atys
ENSELUG00000001906YTHDF19970.683ENSCLAG00000005989YTHDF19572.661Chinchilla_lanigera
ENSELUG00000001906YTHDF19971.892ENSCSAG00000016266YTHDF19474.081Chlorocebus_sabaeus
ENSELUG00000001906YTHDF19973.503ENSCPBG00000027183YTHDF19474.908Chrysemys_picta_bellii
ENSELUG00000001906YTHDF19972.072ENSCANG00000029082YTHDF19474.265Colobus_angolensis_palliatus
ENSELUG00000001906YTHDF19972.875ENSCGRG00001016568Ythdf19475.185Cricetulus_griseus_chok1gshd
ENSELUG00000001906YTHDF19972.875ENSCGRG00000009207Ythdf19575.185Cricetulus_griseus_crigri
ENSELUG00000001906YTHDF19677.543ENSCSEG00000020623YTHDF19970.720Cynoglossus_semilaevis
ENSELUG00000001906YTHDF19877.547ENSCVAG00000017940ythdf19881.855Cyprinodon_variegatus
ENSELUG00000001906YTHDF19983.426ENSCVAG00000014378YTHDF19983.108Cyprinodon_variegatus
ENSELUG00000001906YTHDF19975.773ENSDARG00000016447ythdf19976.852Danio_rerio
ENSELUG00000001906YTHDF19974.444ENSDNOG00000043590YTHDF19474.265Dasypus_novemcinctus
ENSELUG00000001906YTHDF19971.058ENSDORG00000002879Ythdf19171.639Dipodomys_ordii
ENSELUG00000001906YTHDF18155.986ENSETEG00000017860-9160.086Echinops_telfairi
ENSELUG00000001906YTHDF19973.704ENSEASG00005023186YTHDF19473.937Equus_asinus_asinus
ENSELUG00000001906YTHDF19873.258ENSECAG00000019475YTHDF110073.714Equus_caballus
ENSELUG00000001906YTHDF19872.968ENSEEUG00000007461YTHDF19973.823Erinaceus_europaeus
ENSELUG00000001906YTHDF19972.356ENSFCAG00000008917YTHDF19474.265Felis_catus
ENSELUG00000001906YTHDF19973.007ENSFALG00000010463YTHDF19474.770Ficedula_albicollis
ENSELUG00000001906YTHDF19972.356ENSFDAG00000019602YTHDF19473.383Fukomys_damarensis
ENSELUG00000001906YTHDF19983.829ENSFHEG00000002540YTHDF19980.650Fundulus_heteroclitus
ENSELUG00000001906YTHDF19877.547ENSFHEG00000023218ythdf19971.231Fundulus_heteroclitus
ENSELUG00000001906YTHDF19873.310ENSGMOG00000019610ythdf19081.301Gadus_morhua
ENSELUG00000001906YTHDF19974.492ENSGALG00000005745YTHDF110075.189Gallus_gallus
ENSELUG00000001906YTHDF19981.006ENSGAFG00000021100YTHDF19886.380Gambusia_affinis
ENSELUG00000001906YTHDF19981.835ENSGACG00000002613YTHDF19976.589Gasterosteus_aculeatus
ENSELUG00000001906YTHDF19675.701ENSGACG00000012014ythdf19972.136Gasterosteus_aculeatus
ENSELUG00000001906YTHDF19973.684ENSGAGG00000003007YTHDF19474.908Gopherus_agassizii
ENSELUG00000001906YTHDF19974.449ENSGGOG00000008340YTHDF19474.449Gorilla_gorilla
ENSELUG00000001906YTHDF19675.605ENSHBUG00000011284ythdf19970.126Haplochromis_burtoni
ENSELUG00000001906YTHDF19982.495ENSHBUG00000004875YTHDF19981.153Haplochromis_burtoni
ENSELUG00000001906YTHDF19972.171ENSHGLG00000006585YTHDF19473.198Heterocephalus_glaber_female
ENSELUG00000001906YTHDF19972.171ENSHGLG00100004683YTHDF19473.198Heterocephalus_glaber_male
ENSELUG00000001906YTHDF19982.123ENSHCOG00000011303YTHDF110081.481Hippocampus_comes
ENSELUG00000001906YTHDF19974.240ENSHCOG00000008866ythdf19971.725Hippocampus_comes
ENSELUG00000001906YTHDF19979.664ENSIPUG00000000425Ythdf19479.851Ictalurus_punctatus
ENSELUG00000001906YTHDF19971.852ENSSTOG00000023001YTHDF19573.297Ictidomys_tridecemlineatus
ENSELUG00000001906YTHDF19972.383ENSJJAG00000013589Ythdf19574.586Jaculus_jaculus
ENSELUG00000001906YTHDF19982.528ENSKMAG00000017472YTHDF19980.650Kryptolebias_marmoratus
ENSELUG00000001906YTHDF19677.500ENSKMAG00000005595ythdf19970.534Kryptolebias_marmoratus
ENSELUG00000001906YTHDF19679.110ENSLBEG00000014105ythdf19972.727Labrus_bergylta
ENSELUG00000001906YTHDF19982.202ENSLBEG00000012068YTHDF19980.590Labrus_bergylta
ENSELUG00000001906YTHDF19972.643ENSLACG00000014195YTHDF19967.576Latimeria_chalumnae
ENSELUG00000001906YTHDF19974.468ENSLOCG00000005020ythdf19972.360Lepisosteus_oculatus
ENSELUG00000001906YTHDF19974.862ENSLAFG00000008884YTHDF19474.217Loxodonta_africana
ENSELUG00000001906YTHDF19971.892ENSMFAG00000042868YTHDF19474.081Macaca_fascicularis
ENSELUG00000001906YTHDF19971.892ENSMMUG00000009227YTHDF19474.081Macaca_mulatta
ENSELUG00000001906YTHDF19971.892ENSMNEG00000030851YTHDF19474.081Macaca_nemestrina
ENSELUG00000001906YTHDF19971.892ENSMLEG00000009252YTHDF19574.081Mandrillus_leucophaeus
ENSELUG00000001906YTHDF19674.904ENSMAMG00000024255ythdf19970.353Mastacembelus_armatus
ENSELUG00000001906YTHDF19984.730ENSMAMG00000011072YTHDF19981.056Mastacembelus_armatus
ENSELUG00000001906YTHDF19676.894ENSMZEG00005026397ythdf19972.043Maylandia_zebra
ENSELUG00000001906YTHDF19982.495ENSMZEG00005023596YTHDF19981.153Maylandia_zebra
ENSELUG00000001906YTHDF19974.492ENSMGAG00000006139YTHDF19475.000Meleagris_gallopavo
ENSELUG00000001906YTHDF19972.514ENSMAUG00000017660Ythdf19474.815Mesocricetus_auratus
ENSELUG00000001906YTHDF19971.841ENSMICG00000032266YTHDF19474.033Microcebus_murinus
ENSELUG00000001906YTHDF19972.333ENSMOCG00000013573Ythdf19473.492Microtus_ochrogaster
ENSELUG00000001906YTHDF19978.735ENSMMOG00000020467YTHDF19978.328Mola_mola
ENSELUG00000001906YTHDF19671.429ENSMMOG00000017500ythdf19772.186Mola_mola
ENSELUG00000001906YTHDF19773.645ENSMODG00000016842YTHDF110073.970Monodelphis_domestica
ENSELUG00000001906YTHDF19676.336ENSMALG00000015672ythdf19971.692Monopterus_albus
ENSELUG00000001906YTHDF19984.259ENSMALG00000022209YTHDF19980.186Monopterus_albus
ENSELUG00000001906YTHDF19972.152MGP_CAROLIEiJ_G0024790Ythdf19474.444Mus_caroli
ENSELUG00000001906YTHDF19972.152ENSMUSG00000038848Ythdf19474.444Mus_musculus
ENSELUG00000001906YTHDF19971.971MGP_PahariEiJ_G0026237Ythdf19474.259Mus_pahari
ENSELUG00000001906YTHDF19972.152MGP_SPRETEiJ_G0025715Ythdf19474.444Mus_spretus
ENSELUG00000001906YTHDF19770.577ENSMPUG00000008111YTHDF110071.483Mustela_putorius_furo
ENSELUG00000001906YTHDF19974.033ENSMLUG00000002241YTHDF19373.752Myotis_lucifugus
ENSELUG00000001906YTHDF19972.333ENSNGAG00000000334Ythdf19474.539Nannospalax_galili
ENSELUG00000001906YTHDF19982.495ENSNBRG00000015321YTHDF19980.738Neolamprologus_brichardi
ENSELUG00000001906YTHDF19974.270ENSNBRG00000008213ythdf19582.008Neolamprologus_brichardi
ENSELUG00000001906YTHDF19867.547ENSOPRG00000001758-9977.593Ochotona_princeps
ENSELUG00000001906YTHDF17674.439ENSODEG00000000074-9955.054Octodon_degus
ENSELUG00000001906YTHDF19972.828ENSODEG00000004380-9473.616Octodon_degus
ENSELUG00000001906YTHDF19674.401ENSONIG00000016799ythdf19971.587Oreochromis_niloticus
ENSELUG00000001906YTHDF19974.770ENSOANG00000003723YTHDF19474.081Ornithorhynchus_anatinus
ENSELUG00000001906YTHDF17181.771ENSOCUG00000012780YTHDF19670.611Oryctolagus_cuniculus
ENSELUG00000001906YTHDF19673.098ENSORLG00000014665YTHDF19970.507Oryzias_latipes
ENSELUG00000001906YTHDF19982.931ENSORLG00000009739YTHDF19979.109Oryzias_latipes
ENSELUG00000001906YTHDF19982.714ENSORLG00020001332YTHDF19978.495Oryzias_latipes_hni
ENSELUG00000001906YTHDF19673.469ENSORLG00020000307ythdf19970.923Oryzias_latipes_hni
ENSELUG00000001906YTHDF19673.469ENSORLG00015006302ythdf19970.923Oryzias_latipes_hsok
ENSELUG00000001906YTHDF19982.560ENSORLG00015018321YTHDF19978.802Oryzias_latipes_hsok
ENSELUG00000001906YTHDF19676.493ENSOMEG00000002941YTHDF19971.406Oryzias_melastigma
ENSELUG00000001906YTHDF19977.187ENSOMEG00000011843YTHDF19978.681Oryzias_melastigma
ENSELUG00000001906YTHDF19973.077ENSOGAG00000000480YTHDF19474.081Otolemur_garnettii
ENSELUG00000001906YTHDF19969.573ENSOARG00000011639YTHDF19080.095Ovis_aries
ENSELUG00000001906YTHDF19974.449ENSPPAG00000023277YTHDF19574.449Pan_paniscus
ENSELUG00000001906YTHDF19972.222ENSPPRG00000020805YTHDF19474.908Panthera_pardus
ENSELUG00000001906YTHDF19967.784ENSPTIG00000017355YTHDF19676.628Panthera_tigris_altaica
ENSELUG00000001906YTHDF19974.449ENSPTRG00000013730YTHDF19474.449Pan_troglodytes
ENSELUG00000001906YTHDF19971.892ENSPANG00000021472YTHDF19474.081Papio_anubis
ENSELUG00000001906YTHDF19873.234ENSPKIG00000005026YTHDF19969.952Paramormyrops_kingsleyae
ENSELUG00000001906YTHDF19972.812ENSPKIG00000005427ythdf19472.072Paramormyrops_kingsleyae
ENSELUG00000001906YTHDF19974.719ENSPSIG00000005529YTHDF19868.558Pelodiscus_sinensis
ENSELUG00000001906YTHDF19673.929ENSPMGG00000015328ythdf19771.053Periophthalmus_magnuspinnatus
ENSELUG00000001906YTHDF19981.172ENSPMGG00000009101YTHDF19681.350Periophthalmus_magnuspinnatus
ENSELUG00000001906YTHDF19972.333ENSPEMG00000020199Ythdf19574.630Peromyscus_maniculatus_bairdii
ENSELUG00000001906YTHDF19974.164ENSPCIG00000017170YTHDF110074.528Phascolarctos_cinereus
ENSELUG00000001906YTHDF19975.269ENSPFOG00000005405ythdf19971.605Poecilia_formosa
ENSELUG00000001906YTHDF19878.571ENSPLAG00000006653ythdf19971.605Poecilia_latipinna
ENSELUG00000001906YTHDF19977.436ENSPLAG00000006298YTHDF19981.395Poecilia_latipinna
ENSELUG00000001906YTHDF19980.633ENSPMEG00000020969-9984.983Poecilia_mexicana
ENSELUG00000001906YTHDF19877.486ENSPMEG00000023753ythdf19971.905Poecilia_mexicana
ENSELUG00000001906YTHDF19878.195ENSPREG00000002173ythdf19972.019Poecilia_reticulata
ENSELUG00000001906YTHDF19976.884ENSPREG00000017662YTHDF19880.573Poecilia_reticulata
ENSELUG00000001906YTHDF18888.384ENSPPYG00000011226YTHDF19488.384Pongo_abelii
ENSELUG00000001906YTHDF19471.484ENSPCAG00000002452YTHDF19771.820Procavia_capensis
ENSELUG00000001906YTHDF19971.942ENSPCOG00000025969YTHDF19474.128Propithecus_coquereli
ENSELUG00000001906YTHDF19968.284ENSPVAG00000017568YTHDF19964.480Pteropus_vampyrus
ENSELUG00000001906YTHDF19676.894ENSPNYG00000014007ythdf19970.701Pundamilia_nyererei
ENSELUG00000001906YTHDF19982.495ENSPNYG00000002266YTHDF19981.153Pundamilia_nyererei
ENSELUG00000001906YTHDF19975.862ENSPNAG00000012447ythdf19880.583Pygocentrus_nattereri
ENSELUG00000001906YTHDF19972.152ENSRNOG00000027015Ythdf19474.444Rattus_norvegicus
ENSELUG00000001906YTHDF19971.351ENSRBIG00000044959YTHDF19473.529Rhinopithecus_bieti
ENSELUG00000001906YTHDF19971.351ENSRROG00000033014YTHDF19473.529Rhinopithecus_roxellana
ENSELUG00000001906YTHDF19970.631ENSSBOG00000027278YTHDF110072.538Saimiri_boliviensis_boliviensis
ENSELUG00000001906YTHDF19974.312ENSSHAG00000010430YTHDF18474.406Sarcophilus_harrisii
ENSELUG00000001906YTHDF19975.862ENSSFOG00015000284ythdf19973.635Scleropages_formosus
ENSELUG00000001906YTHDF17790.446ENSSMAG00000013715ythdf18888.095Scophthalmus_maximus
ENSELUG00000001906YTHDF19688.168ENSSMAG00000007635YTHDF19977.112Scophthalmus_maximus
ENSELUG00000001906YTHDF19678.053ENSSDUG00000000435ythdf19972.811Seriola_dumerili
ENSELUG00000001906YTHDF19984.015ENSSDUG00000015823YTHDF19978.636Seriola_dumerili
ENSELUG00000001906YTHDF19975.544ENSSLDG00000001054YTHDF19984.459Seriola_lalandi_dorsalis
ENSELUG00000001906YTHDF19674.635ENSSLDG00000024948ythdf19972.840Seriola_lalandi_dorsalis
ENSELUG00000001906YTHDF19775.763ENSSPUG00000015143YTHDF110075.522Sphenodon_punctatus
ENSELUG00000001906YTHDF19674.094ENSSPAG00000014989ythdf19972.923Stegastes_partitus
ENSELUG00000001906YTHDF19982.276ENSSPAG00000003666YTHDF19981.182Stegastes_partitus
ENSELUG00000001906YTHDF19973.048ENSSSCG00000040086YTHDF19472.978Sus_scrofa
ENSELUG00000001906YTHDF19974.677ENSTGUG00000007565YTHDF19575.184Taeniopygia_guttata
ENSELUG00000001906YTHDF19679.024ENSTRUG00000005049YTHDF110079.683Takifugu_rubripes
ENSELUG00000001906YTHDF19974.820ENSTRUG00000004288ythdf19973.132Takifugu_rubripes
ENSELUG00000001906YTHDF19973.857ENSTNIG00000012490ythdf19678.455Tetraodon_nigroviridis
ENSELUG00000001906YTHDF19978.771ENSTNIG00000003975YTHDF19979.615Tetraodon_nigroviridis
ENSELUG00000001906YTHDF19970.677ENSTTRG00000001804YTHDF19966.613Tursiops_truncatus
ENSELUG00000001906YTHDF19973.148ENSUAMG00000011021YTHDF110073.814Ursus_americanus
ENSELUG00000001906YTHDF19772.901ENSUMAG00000022290YTHDF110073.624Ursus_maritimus
ENSELUG00000001906YTHDF19772.414ENSVVUG00000015275YTHDF19973.282Vulpes_vulpes
ENSELUG00000001906YTHDF19874.349ENSXETG00000027086ythdf19868.447Xenopus_tropicalis
ENSELUG00000001906YTHDF19977.513ENSXCOG00000008115YTHDF19980.349Xiphophorus_couchianus
ENSELUG00000001906YTHDF19877.820ENSXCOG00000002490ythdf18976.415Xiphophorus_couchianus
ENSELUG00000001906YTHDF19982.495ENSXMAG00000015644YTHDF19982.432Xiphophorus_maculatus
ENSELUG00000001906YTHDF19877.778ENSXMAG00000008525ythdf19971.605Xiphophorus_maculatus

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