EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000001909 (Gene tree)
Gene ID: 105019729
Gene Symbol: -
Alias: -
Full Name: zinc finger protein ZFMSA12A-like
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 8802 bases
Position: chrLG22:15453725-15462526
Accession: 105019729
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000000299	zf-C2H2	PF00096.26	1.9e-40	1	6
ENSELUP00000000299	zf-C2H2	PF00096.26	1.9e-40	2	6
ENSELUP00000000299	zf-C2H2	PF00096.26	1.9e-40	3	6
ENSELUP00000000299	zf-C2H2	PF00096.26	1.9e-40	4	6
ENSELUP00000000299	zf-C2H2	PF00096.26	1.9e-40	5	6
ENSELUP00000000299	zf-C2H2	PF00096.26	1.9e-40	6	6
ENSELUP00000000304	zf-C2H2	PF00096.26	4.8e-40	1	6
ENSELUP00000000304	zf-C2H2	PF00096.26	4.8e-40	2	6
ENSELUP00000000304	zf-C2H2	PF00096.26	4.8e-40	3	6
ENSELUP00000000304	zf-C2H2	PF00096.26	4.8e-40	4	6
ENSELUP00000000304	zf-C2H2	PF00096.26	4.8e-40	5	6
ENSELUP00000000304	zf-C2H2	PF00096.26	4.8e-40	6	6
ENSELUP00000000295	zf-C2H2	PF00096.26	1.9e-27	1	5
ENSELUP00000000295	zf-C2H2	PF00096.26	1.9e-27	2	5
ENSELUP00000000295	zf-C2H2	PF00096.26	1.9e-27	3	5
ENSELUP00000000295	zf-C2H2	PF00096.26	1.9e-27	4	5
ENSELUP00000000295	zf-C2H2	PF00096.26	1.9e-27	5	5
ENSELUP00000000295	zf-met	PF12874.7	1.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000019294	-	3371	XM_010886113	ENSELUP00000000304	807 (aa)	XP_010884415	-
ENSELUT00000019297	-	4035	XM_010886112	ENSELUP00000000299	753 (aa)	XP_010884414	-
ENSELUT00000019302	-	702	-	ENSELUP00000000295	233 (aa)	-	-

Gene Model

Click here to download ENSELUG00000001909's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000001909's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000001909	-	76	34.043	ENSELUG00000016933	gfi1b	50	38.739
ENSELUG00000001909	-	90	39.535	ENSELUG00000024007	-	81	36.943
ENSELUG00000001909	-	82	36.066	ENSELUG00000007694	-	76	38.065
ENSELUG00000001909	-	99	32.095	ENSELUG00000020794	-	99	31.389
ENSELUG00000001909	-	82	50.000	ENSELUG00000017958	-	68	48.936
ENSELUG00000001909	-	85	34.615	ENSELUG00000010566	si:dkey-182i3.9	93	30.809
ENSELUG00000001909	-	91	39.252	ENSELUG00000013321	-	90	41.463
ENSELUG00000001909	-	91	44.231	ENSELUG00000021391	-	71	44.118
ENSELUG00000001909	-	86	37.017	ENSELUG00000005912	-	85	36.822
ENSELUG00000001909	-	82	32.673	ENSELUG00000017454	si:ch73-367f21.6	99	32.673
ENSELUG00000001909	-	98	33.503	ENSELUG00000018405	-	93	41.667
ENSELUG00000001909	-	79	43.956	ENSELUG00000013357	-	84	43.956
ENSELUG00000001909	-	76	31.818	ENSELUG00000005435	scrt1b	53	35.385
ENSELUG00000001909	-	77	40.887	ENSELUG00000010470	-	80	34.661
ENSELUG00000001909	-	92	36.413	ENSELUG00000019204	-	94	42.484
ENSELUG00000001909	-	82	37.815	ENSELUG00000020017	-	69	34.000
ENSELUG00000001909	-	83	45.882	ENSELUG00000012597	-	99	44.000
ENSELUG00000001909	-	79	35.165	ENSELUG00000018970	-	80	37.281
ENSELUG00000001909	-	97	36.294	ENSELUG00000011838	-	98	32.345
ENSELUG00000001909	-	85	38.571	ENSELUG00000008148	-	76	35.071
ENSELUG00000001909	-	88	36.508	ENSELUG00000017463	-	91	37.391
ENSELUG00000001909	-	82	43.478	ENSELUG00000021242	-	81	34.154
ENSELUG00000001909	-	82	43.478	ENSELUG00000021248	-	88	34.066
ENSELUG00000001909	-	90	46.341	ENSELUG00000021551	-	88	31.713
ENSELUG00000001909	-	82	38.660	ENSELUG00000013806	-	64	38.660
ENSELUG00000001909	-	82	32.450	ENSELUG00000000281	-	56	46.296
ENSELUG00000001909	-	90	37.222	ENSELUG00000004677	-	69	45.217
ENSELUG00000001909	-	86	35.583	ENSELUG00000002844	-	95	35.821
ENSELUG00000001909	-	82	35.714	ENSELUG00000006058	-	84	34.906
ENSELUG00000001909	-	78	34.395	ENSELUG00000016397	-	51	31.102
ENSELUG00000001909	-	82	32.418	ENSELUG00000005665	zfp64	70	43.689
ENSELUG00000001909	-	78	39.024	ENSELUG00000009654	-	65	43.243
ENSELUG00000001909	-	86	35.862	ENSELUG00000021381	-	96	33.990
ENSELUG00000001909	-	86	30.814	ENSELUG00000010993	znf319b	91	30.233
ENSELUG00000001909	-	69	35.556	ENSELUG00000023883	scrt2	57	35.714
ENSELUG00000001909	-	79	37.931	ENSELUG00000021229	-	89	33.588
ENSELUG00000001909	-	79	50.000	ENSELUG00000013245	-	97	44.203
ENSELUG00000001909	-	83	33.939	ENSELUG00000005894	prdm5	71	33.939
ENSELUG00000001909	-	82	39.831	ENSELUG00000012986	-	51	38.610
ENSELUG00000001909	-	89	35.461	ENSELUG00000018737	znf526	76	31.142
ENSELUG00000001909	-	82	41.176	ENSELUG00000013796	-	60	41.176
ENSELUG00000001909	-	86	40.367	ENSELUG00000021355	-	96	37.500
ENSELUG00000001909	-	78	39.011	ENSELUG00000019008	-	86	41.206
ENSELUG00000001909	-	78	47.541	ENSELUG00000009575	-	99	47.541
ENSELUG00000001909	-	91	45.161	ENSELUG00000000485	-	88	45.378
ENSELUG00000001909	-	81	37.984	ENSELUG00000012931	-	67	46.457
ENSELUG00000001909	-	79	38.503	ENSELUG00000021254	-	60	41.429
ENSELUG00000001909	-	83	34.783	ENSELUG00000001968	-	69	37.984
ENSELUG00000001909	-	84	36.667	ENSELUG00000022942	-	61	43.147
ENSELUG00000001909	-	79	37.209	ENSELUG00000013311	-	71	41.921
ENSELUG00000001909	-	79	32.979	ENSELUG00000017783	-	70	32.891
ENSELUG00000001909	-	92	33.333	ENSELUG00000008797	-	56	38.571
ENSELUG00000001909	-	60	31.967	ENSELUG00000002056	SNAI1	71	35.246
ENSELUG00000001909	-	82	39.216	ENSELUG00000013581	GZF1	63	37.415
ENSELUG00000001909	-	76	31.169	ENSELUG00000022228	scrt1a	55	33.929
ENSELUG00000001909	-	82	39.175	ENSELUG00000021287	-	79	40.909
ENSELUG00000001909	-	76	40.741	ENSELUG00000003015	gfi1ab	52	40.559
ENSELUG00000001909	-	99	30.899	ENSELUG00000021560	-	97	32.670
ENSELUG00000001909	-	86	34.518	ENSELUG00000001991	-	63	37.634
ENSELUG00000001909	-	93	36.496	ENSELUG00000013064	-	73	38.636
ENSELUG00000001909	-	91	38.000	ENSELUG00000013094	-	98	43.537
ENSELUG00000001909	-	82	39.286	ENSELUG00000013348	-	94	44.928
ENSELUG00000001909	-	76	38.621	ENSELUG00000013342	-	60	38.583
ENSELUG00000001909	-	87	38.554	ENSELUG00000020211	znf236	71	36.735
ENSELUG00000001909	-	82	34.615	ENSELUG00000013844	-	81	33.333
ENSELUG00000001909	-	96	46.789	ENSELUG00000021499	-	95	38.078
ENSELUG00000001909	-	76	37.719	ENSELUG00000019880	-	93	43.860
ENSELUG00000001909	-	88	37.158	ENSELUG00000021525	-	76	43.284

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000001909	-	79	47.541	ENSAPOG00000019138	-	59	42.424	Acanthochromis_polyacanthus
ENSELUG00000001909	-	84	33.032	ENSAPOG00000022111	-	85	33.032	Acanthochromis_polyacanthus
ENSELUG00000001909	-	78	36.879	ENSAPOG00000008319	-	59	31.818	Acanthochromis_polyacanthus
ENSELUG00000001909	-	82	33.735	ENSACIG00000017892	-	78	42.775	Amphilophus_citrinellus
ENSELUG00000001909	-	82	41.892	ENSACIG00000007464	-	60	42.308	Amphilophus_citrinellus
ENSELUG00000001909	-	60	47.222	ENSACIG00000004641	-	57	44.615	Amphilophus_citrinellus
ENSELUG00000001909	-	81	36.879	ENSAOCG00000015944	-	74	31.081	Amphiprion_ocellaris
ENSELUG00000001909	-	80	48.276	ENSAOCG00000016897	-	62	30.556	Amphiprion_ocellaris
ENSELUG00000001909	-	81	36.879	ENSAOCG00000014769	-	81	31.081	Amphiprion_ocellaris
ENSELUG00000001909	-	73	30.935	ENSAOCG00000006744	-	95	30.065	Amphiprion_ocellaris
ENSELUG00000001909	-	82	34.746	ENSAOCG00000001325	-	77	38.406	Amphiprion_ocellaris
ENSELUG00000001909	-	82	35.938	ENSAPEG00000010013	-	56	35.341	Amphiprion_percula
ENSELUG00000001909	-	80	48.276	ENSAPEG00000001556	-	63	43.333	Amphiprion_percula
ENSELUG00000001909	-	78	41.935	ENSAPEG00000018762	-	63	48.980	Amphiprion_percula
ENSELUG00000001909	-	89	39.855	ENSATEG00000018931	-	93	40.580	Anabas_testudineus
ENSELUG00000001909	-	90	31.977	ENSACLG00000005694	-	54	36.702	Astatotilapia_calliptera
ENSELUG00000001909	-	56	33.077	ENSACLG00000011658	-	84	34.965	Astatotilapia_calliptera
ENSELUG00000001909	-	68	44.565	ENSAMXG00000029518	-	51	31.188	Astyanax_mexicanus
ENSELUG00000001909	-	78	33.607	ENSCING00000002128	zf(c2h2)-35	66	35.669	Ciona_intestinalis
ENSELUG00000001909	-	73	37.762	ENSCSEG00000010453	-	81	46.203	Cynoglossus_semilaevis
ENSELUG00000001909	-	64	42.045	ENSCSEG00000015593	-	93	47.500	Cynoglossus_semilaevis
ENSELUG00000001909	-	75	37.143	ENSCSEG00000010264	-	72	38.525	Cynoglossus_semilaevis
ENSELUG00000001909	-	86	35.833	ENSCVAG00000003250	-	64	44.068	Cyprinodon_variegatus
ENSELUG00000001909	-	80	42.857	ENSCVAG00000015616	-	83	43.262	Cyprinodon_variegatus
ENSELUG00000001909	-	82	39.583	ENSCVAG00000006653	-	69	43.571	Cyprinodon_variegatus
ENSELUG00000001909	-	62	37.500	ENSCVAG00000020141	-	68	39.394	Cyprinodon_variegatus
ENSELUG00000001909	-	74	40.476	ENSCVAG00000012682	-	63	47.059	Cyprinodon_variegatus
ENSELUG00000001909	-	78	35.838	ENSEBUG00000007931	-	65	39.645	Eptatretus_burgeri
ENSELUG00000001909	-	78	37.423	ENSGAFG00000008204	-	76	41.096	Gambusia_affinis
ENSELUG00000001909	-	73	41.121	ENSGAFG00000001879	-	97	45.255	Gambusia_affinis
ENSELUG00000001909	-	90	31.977	ENSHBUG00000006656	-	66	36.702	Haplochromis_burtoni
ENSELUG00000001909	-	79	39.796	ENSHCOG00000008213	-	55	41.053	Hippocampus_comes
ENSELUG00000001909	-	82	40.860	ENSHCOG00000019389	-	58	41.333	Hippocampus_comes
ENSELUG00000001909	-	80	41.538	ENSHCOG00000001873	-	60	42.623	Hippocampus_comes
ENSELUG00000001909	-	79	41.176	ENSHCOG00000020670	-	75	43.820	Hippocampus_comes
ENSELUG00000001909	-	88	44.304	ENSHCOG00000013489	-	92	44.304	Hippocampus_comes
ENSELUG00000001909	-	78	36.264	ENSHCOG00000015497	-	97	52.273	Hippocampus_comes
ENSELUG00000001909	-	82	30.244	ENSHCOG00000008227	-	52	33.846	Hippocampus_comes
ENSELUG00000001909	-	80	41.538	ENSHCOG00000008550	-	60	42.623	Hippocampus_comes
ENSELUG00000001909	-	85	32.663	ENSLBEG00000007106	-	66	42.500	Labrus_bergylta
ENSELUG00000001909	-	94	31.638	ENSLBEG00000017407	-	98	30.612	Labrus_bergylta
ENSELUG00000001909	-	82	40.000	ENSLBEG00000001132	-	82	48.276	Labrus_bergylta
ENSELUG00000001909	-	78	30.939	ENSLBEG00000017424	-	96	37.349	Labrus_bergylta
ENSELUG00000001909	-	78	32.558	ENSLBEG00000011210	-	57	37.037	Labrus_bergylta
ENSELUG00000001909	-	78	32.386	ENSLBEG00000006161	-	86	38.983	Labrus_bergylta
ENSELUG00000001909	-	85	46.296	ENSLOCG00000004208	-	99	46.324	Lepisosteus_oculatus
ENSELUG00000001909	-	90	39.759	ENSMAMG00000017939	-	83	34.951	Mastacembelus_armatus
ENSELUG00000001909	-	77	32.544	ENSMZEG00005013907	-	75	30.980	Maylandia_zebra
ENSELUG00000001909	-	88	36.242	ENSMALG00000004279	-	83	44.203	Monopterus_albus
ENSELUG00000001909	-	81	30.387	ENSONIG00000007967	-	72	32.143	Oreochromis_niloticus
ENSELUG00000001909	-	82	35.754	ENSONIG00000005050	-	83	35.754	Oreochromis_niloticus
ENSELUG00000001909	-	82	40.000	ENSORLG00000021885	-	68	42.282	Oryzias_latipes
ENSELUG00000001909	-	91	34.722	ENSORLG00000002268	-	94	33.333	Oryzias_latipes
ENSELUG00000001909	-	79	31.138	ENSORLG00020018921	-	76	42.188	Oryzias_latipes_hni
ENSELUG00000001909	-	81	41.111	ENSORLG00015018099	-	66	42.953	Oryzias_latipes_hsok
ENSELUG00000001909	-	88	30.526	ENSOMEG00000005578	-	71	42.446	Oryzias_melastigma
ENSELUG00000001909	-	78	39.344	ENSPMGG00000002659	-	75	47.059	Periophthalmus_magnuspinnatus
ENSELUG00000001909	-	80	32.984	ENSPMGG00000006928	-	52	36.101	Periophthalmus_magnuspinnatus
ENSELUG00000001909	-	78	38.365	ENSPMGG00000002661	-	71	38.365	Periophthalmus_magnuspinnatus
ENSELUG00000001909	-	79	36.957	ENSPMGG00000007051	-	79	35.689	Periophthalmus_magnuspinnatus
ENSELUG00000001909	-	81	34.356	ENSPMGG00000002455	-	95	37.186	Periophthalmus_magnuspinnatus
ENSELUG00000001909	-	91	36.612	ENSPMGG00000009571	-	76	36.066	Periophthalmus_magnuspinnatus
ENSELUG00000001909	-	73	43.333	ENSPMGG00000019750	-	78	43.860	Periophthalmus_magnuspinnatus
ENSELUG00000001909	-	78	32.353	ENSPMAG00000004189	-	96	32.701	Petromyzon_marinus
ENSELUG00000001909	-	71	33.645	ENSPMAG00000002022	-	100	30.994	Petromyzon_marinus
ENSELUG00000001909	-	93	37.805	ENSPFOG00000018860	-	100	40.708	Poecilia_formosa
ENSELUG00000001909	-	91	37.681	ENSPFOG00000009491	-	53	41.818	Poecilia_formosa
ENSELUG00000001909	-	82	37.681	ENSPLAG00000008941	-	87	42.593	Poecilia_latipinna
ENSELUG00000001909	-	79	34.286	ENSPLAG00000014832	-	93	33.813	Poecilia_latipinna
ENSELUG00000001909	-	76	35.878	ENSPLAG00000010067	-	75	45.714	Poecilia_latipinna
ENSELUG00000001909	-	91	37.681	ENSPMEG00000024117	-	53	41.818	Poecilia_mexicana
ENSELUG00000001909	-	91	31.915	ENSPMEG00000002953	-	60	34.513	Poecilia_mexicana
ENSELUG00000001909	-	79	34.286	ENSPMEG00000005210	-	93	33.813	Poecilia_mexicana
ENSELUG00000001909	-	61	39.450	ENSPREG00000009488	-	90	42.857	Poecilia_reticulata
ENSELUG00000001909	-	50	41.573	ENSPREG00000002603	-	89	41.573	Poecilia_reticulata
ENSELUG00000001909	-	78	42.056	ENSPNYG00000017888	-	52	42.697	Pundamilia_nyererei
ENSELUG00000001909	-	96	30.814	ENSPNAG00000005946	-	93	34.872	Pygocentrus_nattereri
ENSELUG00000001909	-	60	42.241	ENSSFOG00015011531	-	89	40.000	Scleropages_formosus
ENSELUG00000001909	-	89	43.038	ENSSMAG00000013291	-	97	43.038	Scophthalmus_maximus
ENSELUG00000001909	-	79	32.738	ENSSMAG00000008308	-	69	32.765	Scophthalmus_maximus
ENSELUG00000001909	-	79	32.738	ENSSDUG00000013048	-	68	32.765	Seriola_dumerili
ENSELUG00000001909	-	79	32.738	ENSSLDG00000011849	-	64	33.106	Seriola_lalandi_dorsalis
ENSELUG00000001909	-	83	35.833	ENSSLDG00000014436	-	72	38.172	Seriola_lalandi_dorsalis
ENSELUG00000001909	-	89	33.333	ENSSPAG00000011544	-	63	34.615	Stegastes_partitus
ENSELUG00000001909	-	78	35.000	ENSSPAG00000011533	-	91	40.000	Stegastes_partitus
ENSELUG00000001909	-	90	43.210	ENSXETG00000012506	znf91	99	43.210	Xenopus_tropicalis
ENSELUG00000001909	-	83	35.294	ENSXCOG00000003441	-	70	35.294	Xiphophorus_couchianus
ENSELUG00000001909	-	72	36.986	ENSXCOG00000000254	-	84	36.986	Xiphophorus_couchianus
ENSELUG00000001909	-	84	43.284	ENSXCOG00000014360	-	53	40.678	Xiphophorus_couchianus
ENSELUG00000001909	-	86	36.076	ENSXCOG00000020768	-	82	37.671	Xiphophorus_couchianus
ENSELUG00000001909	-	51	34.091	ENSXMAG00000012936	-	89	34.091	Xiphophorus_maculatus