EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000001945 (Gene tree)
Gene ID: 105013939
Gene Symbol: prpf6
Alias: c20orf14|fc12b02|wu:fa05f07|wu:fc12b02|zgc:65913
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 26881 bases
Position: chrLG12:25581439-25608319
Accession: 105013939
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000000355	PRP1_N	PF06424.12	2.1e-56	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000019217	-	6701	XM_010875823	ENSELUP00000000355	1003 (aa)	XP_010874125	UPI00057751AA

Gene Model

Click here to download ENSELUG00000001945's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000001945's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000001945	prpf6	93	90.967	ENSG00000101161	PRPF6	100	90.967	Homo_sapiens
ENSELUG00000001945	prpf6	94	95.546	ENSAPOG00000010395	prpf6	97	95.546	Acanthochromis_polyacanthus
ENSELUG00000001945	prpf6	93	90.234	ENSAMEG00000001916	PRPF6	99	90.234	Ailuropoda_melanoleuca
ENSELUG00000001945	prpf6	94	95.122	ENSACIG00000019862	prpf6	97	95.122	Amphilophus_citrinellus
ENSELUG00000001945	prpf6	94	95.652	ENSAOCG00000012988	prpf6	97	95.652	Amphiprion_ocellaris
ENSELUG00000001945	prpf6	93	88.746	ENSAPEG00000008301	prpf6	100	88.960	Amphiprion_percula
ENSELUG00000001945	prpf6	94	95.334	ENSATEG00000005581	prpf6	97	95.334	Anabas_testudineus
ENSELUG00000001945	prpf6	93	91.180	ENSACAG00000006464	PRPF6	95	91.180	Anolis_carolinensis
ENSELUG00000001945	prpf6	93	91.873	ENSANAG00000012661	PRPF6	100	91.873	Aotus_nancymaae
ENSELUG00000001945	prpf6	94	95.016	ENSACLG00000025875	prpf6	97	95.016	Astatotilapia_calliptera
ENSELUG00000001945	prpf6	94	93.151	ENSAMXG00000001929	prpf6	97	93.151	Astyanax_mexicanus
ENSELUG00000001945	prpf6	93	91.180	ENSBTAG00000011656	PRPF6	100	91.180	Bos_taurus
ENSELUG00000001945	prpf6	93	90.967	ENSCJAG00000010616	PRPF6	100	90.967	Callithrix_jacchus
ENSELUG00000001945	prpf6	93	91.180	ENSCAFG00000013165	PRPF6	100	91.180	Canis_familiaris
ENSELUG00000001945	prpf6	93	91.180	ENSCAFG00020002050	PRPF6	100	91.180	Canis_lupus_dingo
ENSELUG00000001945	prpf6	93	91.180	ENSCHIG00000018187	PRPF6	100	91.180	Capra_hircus
ENSELUG00000001945	prpf6	93	91.180	ENSTSYG00000007814	PRPF6	100	91.180	Carlito_syrichta
ENSELUG00000001945	prpf6	91	90.731	ENSCAPG00000015077	PRPF6	100	90.731	Cavia_aperea
ENSELUG00000001945	prpf6	93	91.605	ENSCPOG00000007518	PRPF6	100	91.605	Cavia_porcellus
ENSELUG00000001945	prpf6	93	87.885	ENSCCAG00000024564	PRPF6	100	87.885	Cebus_capucinus
ENSELUG00000001945	prpf6	93	91.073	ENSCATG00000037473	PRPF6	100	91.073	Cercocebus_atys
ENSELUG00000001945	prpf6	93	87.991	ENSCLAG00000003854	PRPF6	100	87.991	Chinchilla_lanigera
ENSELUG00000001945	prpf6	93	87.012	ENSCSAG00000016742	PRPF6	100	87.012	Chlorocebus_sabaeus
ENSELUG00000001945	prpf6	79	76.098	ENSCHOG00000003315	-	99	76.066	Choloepus_hoffmanni
ENSELUG00000001945	prpf6	97	88.866	ENSCPBG00000013964	PRPF6	96	91.702	Chrysemys_picta_bellii
ENSELUG00000001945	prpf6	93	72.516	ENSCING00000008817	-	99	72.516	Ciona_intestinalis
ENSELUG00000001945	prpf6	93	90.861	ENSCANG00000038230	PRPF6	100	90.861	Colobus_angolensis_palliatus
ENSELUG00000001945	prpf6	93	91.605	ENSCGRG00001022666	Prpf6	100	91.605	Cricetulus_griseus_chok1gshd
ENSELUG00000001945	prpf6	93	89.389	ENSCSEG00000018561	prpf6	100	89.389	Cynoglossus_semilaevis
ENSELUG00000001945	prpf6	94	94.380	ENSCVAG00000010550	prpf6	97	94.380	Cyprinodon_variegatus
ENSELUG00000001945	prpf6	94	92.812	ENSDARG00000091367	prpf6	100	92.812	Danio_rerio
ENSELUG00000001945	prpf6	93	90.967	ENSDNOG00000040544	PRPF6	100	90.967	Dasypus_novemcinctus
ENSELUG00000001945	prpf6	85	91.355	ENSDORG00000005406	Prpf6	100	91.355	Dipodomys_ordii
ENSELUG00000001945	prpf6	93	70.418	FBgn0036828	CG6841	99	70.740	Drosophila_melanogaster
ENSELUG00000001945	prpf6	80	91.374	ENSETEG00000004447	PRPF6	85	91.374	Echinops_telfairi
ENSELUG00000001945	prpf6	93	85.079	ENSEBUG00000008835	prpf6	100	85.079	Eptatretus_burgeri
ENSELUG00000001945	prpf6	94	90.832	ENSEASG00005023115	PRPF6	100	91.392	Equus_asinus_asinus
ENSELUG00000001945	prpf6	93	87.141	ENSECAG00000013983	PRPF6	100	87.141	Equus_caballus
ENSELUG00000001945	prpf6	84	91.667	ENSEEUG00000000180	PRPF6	81	91.667	Erinaceus_europaeus
ENSELUG00000001945	prpf6	93	91.286	ENSFCAG00000001183	PRPF6	100	91.286	Felis_catus
ENSELUG00000001945	prpf6	94	84.155	ENSFALG00000006046	-	98	84.155	Ficedula_albicollis
ENSELUG00000001945	prpf6	94	90.671	ENSFALG00000010326	-	98	90.671	Ficedula_albicollis
ENSELUG00000001945	prpf6	93	90.223	ENSFDAG00000006451	PRPF6	100	91.497	Fukomys_damarensis
ENSELUG00000001945	prpf6	94	94.910	ENSFHEG00000000560	prpf6	97	94.910	Fundulus_heteroclitus
ENSELUG00000001945	prpf6	94	93.743	ENSGMOG00000015622	prpf6	99	93.743	Gadus_morhua
ENSELUG00000001945	prpf6	93	91.392	ENSGALG00000006001	PRPF6	100	91.392	Gallus_gallus
ENSELUG00000001945	prpf6	94	89.926	ENSGAFG00000021109	prpf6	97	89.926	Gambusia_affinis
ENSELUG00000001945	prpf6	94	94.062	ENSGACG00000002576	prpf6	99	94.062	Gasterosteus_aculeatus
ENSELUG00000001945	prpf6	93	91.596	ENSGAGG00000008653	PRPF6	96	91.596	Gopherus_agassizii
ENSELUG00000001945	prpf6	93	90.967	ENSGGOG00000016876	PRPF6	100	90.967	Gorilla_gorilla
ENSELUG00000001945	prpf6	94	95.016	ENSHBUG00000004496	prpf6	97	95.016	Haplochromis_burtoni
ENSELUG00000001945	prpf6	93	91.498	ENSHGLG00000009222	PRPF6	100	91.498	Heterocephalus_glaber_female
ENSELUG00000001945	prpf6	91	91.494	ENSHGLG00100016600	PRPF6	100	91.494	Heterocephalus_glaber_male
ENSELUG00000001945	prpf6	94	93.936	ENSHCOG00000011513	prpf6	97	93.849	Hippocampus_comes
ENSELUG00000001945	prpf6	95	92.662	ENSIPUG00000004912	prpf6	97	93.129	Ictalurus_punctatus
ENSELUG00000001945	prpf6	93	89.172	ENSSTOG00000002922	PRPF6	100	88.535	Ictidomys_tridecemlineatus
ENSELUG00000001945	prpf6	93	91.605	ENSJJAG00000000836	Prpf6	100	91.605	Jaculus_jaculus
ENSELUG00000001945	prpf6	94	94.804	ENSKMAG00000017800	prpf6	97	94.804	Kryptolebias_marmoratus
ENSELUG00000001945	prpf6	94	94.592	ENSLBEG00000012582	prpf6	97	94.592	Labrus_bergylta
ENSELUG00000001945	prpf6	93	93.085	ENSLOCG00000004827	prpf6	96	91.702	Lepisosteus_oculatus
ENSELUG00000001945	prpf6	93	90.755	ENSLAFG00000005272	PRPF6	100	90.755	Loxodonta_africana
ENSELUG00000001945	prpf6	93	90.861	ENSMFAG00000037542	PRPF6	100	90.861	Macaca_fascicularis
ENSELUG00000001945	prpf6	93	84.713	ENSMMUG00000015558	PRPF6	98	92.201	Macaca_mulatta
ENSELUG00000001945	prpf6	93	78.496	ENSMNEG00000045555	PRPF6	100	78.496	Macaca_nemestrina
ENSELUG00000001945	prpf6	94	95.016	ENSMAMG00000010718	prpf6	97	95.016	Mastacembelus_armatus
ENSELUG00000001945	prpf6	94	94.580	ENSMZEG00005015261	-	100	94.580	Maylandia_zebra
ENSELUG00000001945	prpf6	87	95.205	ENSMZEG00005026539	prpf6	100	95.205	Maylandia_zebra
ENSELUG00000001945	prpf6	91	91.603	ENSMGAG00000006634	PRPF6	100	91.603	Meleagris_gallopavo
ENSELUG00000001945	prpf6	93	91.605	ENSMAUG00000013969	Prpf6	100	91.605	Mesocricetus_auratus
ENSELUG00000001945	prpf6	81	90.633	ENSMICG00000017793	PRPF6	98	90.686	Microcebus_murinus
ENSELUG00000001945	prpf6	93	91.605	ENSMOCG00000001701	Prpf6	100	91.605	Microtus_ochrogaster
ENSELUG00000001945	prpf6	93	94.319	ENSMMOG00000020419	prpf6	100	94.319	Mola_mola
ENSELUG00000001945	prpf6	93	92.478	ENSMODG00000017051	PRPF6	99	92.478	Monodelphis_domestica
ENSELUG00000001945	prpf6	92	94.908	ENSMALG00000000089	prpf6	100	94.908	Monopterus_albus
ENSELUG00000001945	prpf6	93	85.335	MGP_CAROLIEiJ_G0024814	Prpf6	100	92.593	Mus_caroli
ENSELUG00000001945	prpf6	93	91.605	ENSMUSG00000002455	Prpf6	100	92.593	Mus_musculus
ENSELUG00000001945	prpf6	93	91.605	MGP_PahariEiJ_G0026262	Prpf6	100	92.593	Mus_pahari
ENSELUG00000001945	prpf6	93	91.605	MGP_SPRETEiJ_G0025741	Prpf6	100	92.593	Mus_spretus
ENSELUG00000001945	prpf6	86	91.859	ENSMPUG00000008673	PRPF6	99	91.418	Mustela_putorius_furo
ENSELUG00000001945	prpf6	93	91.711	ENSNGAG00000003365	Prpf6	100	91.711	Nannospalax_galili
ENSELUG00000001945	prpf6	94	95.122	ENSNBRG00000015025	prpf6	97	95.122	Neolamprologus_brichardi
ENSELUG00000001945	prpf6	93	90.861	ENSNLEG00000010208	PRPF6	100	90.861	Nomascus_leucogenys
ENSELUG00000001945	prpf6	93	83.936	ENSMEUG00000009824	-	90	84.190	Notamacropus_eugenii
ENSELUG00000001945	prpf6	93	85.866	ENSODEG00000004841	PRPF6	100	85.866	Octodon_degus
ENSELUG00000001945	prpf6	94	95.016	ENSONIG00000017406	prpf6	97	95.016	Oreochromis_niloticus
ENSELUG00000001945	prpf6	93	91.605	ENSOANG00000004920	PRPF6	100	91.605	Ornithorhynchus_anatinus
ENSELUG00000001945	prpf6	92	89.592	ENSOCUG00000014151	PRPF6	100	89.592	Oryctolagus_cuniculus
ENSELUG00000001945	prpf6	94	94.161	ENSORLG00000009592	prpf6	97	94.161	Oryzias_latipes
ENSELUG00000001945	prpf6	94	94.055	ENSORLG00020001458	prpf6	97	94.055	Oryzias_latipes_hni
ENSELUG00000001945	prpf6	94	94.055	ENSORLG00015018762	prpf6	97	94.055	Oryzias_latipes_hsok
ENSELUG00000001945	prpf6	94	94.055	ENSOMEG00000012174	prpf6	97	94.055	Oryzias_melastigma
ENSELUG00000001945	prpf6	93	84.183	ENSOGAG00000007573	PRPF6	100	84.183	Otolemur_garnettii
ENSELUG00000001945	prpf6	93	90.755	ENSOARG00000008776	PRPF6	99	90.755	Ovis_aries
ENSELUG00000001945	prpf6	93	90.967	ENSPPAG00000008686	PRPF6	100	90.967	Pan_paniscus
ENSELUG00000001945	prpf6	93	91.286	ENSPPRG00000008497	PRPF6	100	91.286	Panthera_pardus
ENSELUG00000001945	prpf6	91	91.276	ENSPTIG00000011184	PRPF6	97	91.276	Panthera_tigris_altaica
ENSELUG00000001945	prpf6	93	90.967	ENSPTRG00000013765	PRPF6	100	90.967	Pan_troglodytes
ENSELUG00000001945	prpf6	93	90.648	ENSPANG00000024135	PRPF6	100	90.648	Papio_anubis
ENSELUG00000001945	prpf6	96	91.675	ENSPKIG00000005627	prpf6	99	94.043	Paramormyrops_kingsleyae
ENSELUG00000001945	prpf6	87	91.497	ENSPSIG00000007717	PRPF6	100	91.497	Pelodiscus_sinensis
ENSELUG00000001945	prpf6	96	92.284	ENSPMGG00000008925	prpf6	97	93.220	Periophthalmus_magnuspinnatus
ENSELUG00000001945	prpf6	93	91.605	ENSPEMG00000016036	Prpf6	100	91.605	Peromyscus_maniculatus_bairdii
ENSELUG00000001945	prpf6	94	86.632	ENSPMAG00000006144	prpf6	100	86.632	Petromyzon_marinus
ENSELUG00000001945	prpf6	93	91.923	ENSPCIG00000017909	PRPF6	100	91.923	Phascolarctos_cinereus
ENSELUG00000001945	prpf6	94	93.888	ENSPFOG00000006431	prpf6	97	93.888	Poecilia_formosa
ENSELUG00000001945	prpf6	94	94.486	ENSPLAG00000005974	prpf6	97	94.486	Poecilia_latipinna
ENSELUG00000001945	prpf6	94	94.698	ENSPMEG00000009977	prpf6	97	94.698	Poecilia_mexicana
ENSELUG00000001945	prpf6	94	94.586	ENSPREG00000017993	prpf6	92	94.586	Poecilia_reticulata
ENSELUG00000001945	prpf6	93	90.436	ENSPPYG00000011256	PRPF6	100	90.436	Pongo_abelii
ENSELUG00000001945	prpf6	88	92.920	ENSPCAG00000006536	PRPF6	88	92.920	Procavia_capensis
ENSELUG00000001945	prpf6	93	90.755	ENSPCOG00000016881	PRPF6	100	90.755	Propithecus_coquereli
ENSELUG00000001945	prpf6	93	85.547	ENSPVAG00000014316	PRPF6	100	85.547	Pteropus_vampyrus
ENSELUG00000001945	prpf6	94	70.961	ENSPNYG00000001939	prpf6	97	83.457	Pundamilia_nyererei
ENSELUG00000001945	prpf6	94	92.940	ENSPNAG00000015606	prpf6	97	92.940	Pygocentrus_nattereri
ENSELUG00000001945	prpf6	93	91.498	ENSRNOG00000051498	Prpf6	100	91.498	Rattus_norvegicus
ENSELUG00000001945	prpf6	93	90.861	ENSRBIG00000043613	PRPF6	100	90.861	Rhinopithecus_bieti
ENSELUG00000001945	prpf6	93	87.831	ENSRROG00000040969	PRPF6	98	90.830	Rhinopithecus_roxellana
ENSELUG00000001945	prpf6	85	87.965	ENSSBOG00000020632	PRPF6	93	85.986	Saimiri_boliviensis_boliviensis
ENSELUG00000001945	prpf6	93	91.923	ENSSHAG00000016810	PRPF6	100	91.923	Sarcophilus_harrisii
ENSELUG00000001945	prpf6	92	94.516	ENSSFOG00015020859	prpf6	100	94.516	Scleropages_formosus
ENSELUG00000001945	prpf6	94	95.122	ENSSMAG00000008112	prpf6	97	95.122	Scophthalmus_maximus
ENSELUG00000001945	prpf6	94	95.334	ENSSDUG00000016142	prpf6	97	95.334	Seriola_dumerili
ENSELUG00000001945	prpf6	94	95.334	ENSSLDG00000025283	prpf6	97	95.334	Seriola_lalandi_dorsalis
ENSELUG00000001945	prpf6	87	90.806	ENSSPUG00000018260	PRPF6	100	90.806	Sphenodon_punctatus
ENSELUG00000001945	prpf6	94	95.334	ENSSPAG00000015850	prpf6	97	95.334	Stegastes_partitus
ENSELUG00000001945	prpf6	95	89.375	ENSSSCG00000029119	PRPF6	100	90.590	Sus_scrofa
ENSELUG00000001945	prpf6	93	91.419	ENSTGUG00000007221	PRPF6	100	91.419	Taeniopygia_guttata
ENSELUG00000001945	prpf6	94	94.380	ENSTRUG00000002920	prpf6	97	94.380	Takifugu_rubripes
ENSELUG00000001945	prpf6	93	87.885	ENSTNIG00000017873	prpf6	100	87.885	Tetraodon_nigroviridis
ENSELUG00000001945	prpf6	82	88.889	ENSTBEG00000005348	PRPF6	85	88.889	Tupaia_belangeri
ENSELUG00000001945	prpf6	93	90.755	ENSTTRG00000013068	PRPF6	100	90.755	Tursiops_truncatus
ENSELUG00000001945	prpf6	91	89.674	ENSUMAG00000021631	PRPF6	98	89.674	Ursus_maritimus
ENSELUG00000001945	prpf6	93	91.180	ENSVVUG00000014948	PRPF6	100	91.180	Vulpes_vulpes
ENSELUG00000001945	prpf6	93	91.383	ENSXETG00000012054	prpf6	97	91.383	Xenopus_tropicalis
ENSELUG00000001945	prpf6	94	94.698	ENSXCOG00000008082	prpf6	97	94.698	Xiphophorus_couchianus
ENSELUG00000001945	prpf6	94	94.698	ENSXMAG00000015581	prpf6	97	94.698	Xiphophorus_maculatus