EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000001991 (Gene tree)
Gene ID: 105005925
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 420
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 5222 bases
Position: chrLG23:13297328-13302549
Accession: 105005925
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000026214	zf-C2H2	PF00096.26	4.3e-35	1	8
ENSELUP00000026214	zf-C2H2	PF00096.26	4.3e-35	2	8
ENSELUP00000026214	zf-C2H2	PF00096.26	4.3e-35	3	8
ENSELUP00000026214	zf-C2H2	PF00096.26	4.3e-35	4	8
ENSELUP00000026214	zf-C2H2	PF00096.26	4.3e-35	5	8
ENSELUP00000026214	zf-C2H2	PF00096.26	4.3e-35	6	8
ENSELUP00000026214	zf-C2H2	PF00096.26	4.3e-35	7	8
ENSELUP00000026214	zf-C2H2	PF00096.26	4.3e-35	8	8
ENSELUP00000026214	zf-met	PF12874.7	0.00037	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000019137	-	2921	XM_010864192	ENSELUP00000026214	652 (aa)	XP_010862494	UPI000577B712

Gene Model

Click here to download ENSELUG00000001991's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000001991's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000001991	-	70	46.479	ENSELUG00000010454	-	98	35.455
ENSELUG00000001991	-	63	37.634	ENSELUG00000001909	-	86	34.518
ENSELUG00000001991	-	56	44.444	ENSELUG00000018405	-	92	44.444
ENSELUG00000001991	-	53	46.980	ENSELUG00000000485	-	86	46.980
ENSELUG00000001991	-	68	53.431	ENSELUG00000021381	-	79	53.431
ENSELUG00000001991	-	95	44.344	ENSELUG00000021560	-	87	55.378
ENSELUG00000001991	-	63	37.857	ENSELUG00000008786	-	68	37.306
ENSELUG00000001991	-	53	50.000	ENSELUG00000009575	-	99	48.227
ENSELUG00000001991	-	95	42.920	ENSELUG00000020794	-	84	53.097
ENSELUG00000001991	-	77	48.113	ENSELUG00000010470	-	77	44.534
ENSELUG00000001991	-	79	41.546	ENSELUG00000011838	-	99	41.546
ENSELUG00000001991	-	96	36.574	ENSELUG00000002844	-	69	49.561
ENSELUG00000001991	-	51	40.571	ENSELUG00000010566	si:dkey-182i3.9	76	40.571

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000001991	-	50	42.929	ENSACIG00000009780	-	71	42.929	Amphilophus_citrinellus
ENSELUG00000001991	-	58	47.917	ENSATEG00000008320	-	82	47.917	Anabas_testudineus
ENSELUG00000001991	-	65	31.166	ENSACLG00000020268	-	69	35.897	Astatotilapia_calliptera
ENSELUG00000001991	-	56	42.152	ENSCVAG00000001417	-	96	42.152	Cyprinodon_variegatus
ENSELUG00000001991	-	51	43.860	ENSCVAG00000010160	-	80	42.424	Cyprinodon_variegatus
ENSELUG00000001991	-	53	44.037	ENSHCOG00000003909	-	70	43.299	Hippocampus_comes
ENSELUG00000001991	-	51	47.799	ENSPFOG00000007847	-	100	47.799	Poecilia_formosa