EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000002264 (Gene tree)
Gene ID: 105022601
Gene Symbol: rnpc3
Alias: caliban|clbn|zgc:136847
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 18628 bases
Position: chrLG21:10149885-10168512
Accession: 105022601
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000000709	RRM_1	PF00076.22	5.1e-17	1	2
ENSELUP00000000709	RRM_1	PF00076.22	5.1e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000018601	-	5505	XM_010891164	ENSELUP00000000709	524 (aa)	XP_010889466	UPI00057604B9

Gene Model

Click here to download ENSELUG00000002264's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000002264's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000002264	rnpc3	97	51.224	ENSG00000185946	RNPC3	96	58.647	Homo_sapiens
ENSELUG00000002264	rnpc3	99	68.260	ENSAPOG00000017371	rnpc3	99	70.498	Acanthochromis_polyacanthus
ENSELUG00000002264	rnpc3	97	51.823	ENSAMEG00000001694	RNPC3	95	54.191	Ailuropoda_melanoleuca
ENSELUG00000002264	rnpc3	98	64.808	ENSACIG00000021043	rnpc3	99	66.731	Amphilophus_citrinellus
ENSELUG00000002264	rnpc3	99	69.349	ENSAOCG00000014052	rnpc3	97	71.264	Amphiprion_ocellaris
ENSELUG00000002264	rnpc3	99	69.157	ENSAPEG00000008739	rnpc3	97	71.073	Amphiprion_percula
ENSELUG00000002264	rnpc3	99	66.667	ENSATEG00000021263	rnpc3	99	69.084	Anabas_testudineus
ENSELUG00000002264	rnpc3	89	53.617	ENSAPLG00000015605	RNPC3	99	53.830	Anas_platyrhynchos
ENSELUG00000002264	rnpc3	96	55.050	ENSACAG00000002029	RNPC3	97	53.876	Anolis_carolinensis
ENSELUG00000002264	rnpc3	97	50.844	ENSANAG00000019950	RNPC3	95	52.852	Aotus_nancymaae
ENSELUG00000002264	rnpc3	99	66.411	ENSACLG00000014702	rnpc3	99	67.816	Astatotilapia_calliptera
ENSELUG00000002264	rnpc3	99	66.667	ENSAMXG00000033372	rnpc3	99	67.362	Astyanax_mexicanus
ENSELUG00000002264	rnpc3	97	51.040	ENSBTAG00000019091	RNPC3	95	52.952	Bos_taurus
ENSELUG00000002264	rnpc3	97	53.502	ENSCJAG00000035686	RNPC3	95	53.696	Callithrix_jacchus
ENSELUG00000002264	rnpc3	97	51.154	ENSCAFG00000019972	RNPC3	95	53.425	Canis_familiaris
ENSELUG00000002264	rnpc3	97	51.154	ENSCAFG00020011300	RNPC3	95	53.425	Canis_lupus_dingo
ENSELUG00000002264	rnpc3	97	54.143	ENSCHIG00000020361	RNPC3	95	52.762	Capra_hircus
ENSELUG00000002264	rnpc3	97	54.023	ENSTSYG00000030256	RNPC3	95	53.372	Carlito_syrichta
ENSELUG00000002264	rnpc3	87	46.868	ENSCAPG00000013600	RNPC3	99	45.336	Cavia_aperea
ENSELUG00000002264	rnpc3	97	50.664	ENSCPOG00000031638	RNPC3	95	53.307	Cavia_porcellus
ENSELUG00000002264	rnpc3	97	50.943	ENSCCAG00000024301	RNPC3	95	53.269	Cebus_capucinus
ENSELUG00000002264	rnpc3	98	50.844	ENSCATG00000002086	RNPC3	95	53.346	Cercocebus_atys
ENSELUG00000002264	rnpc3	97	40.421	ENSCATG00000035930	-	95	41.016	Cercocebus_atys
ENSELUG00000002264	rnpc3	97	53.668	ENSCLAG00000005169	RNPC3	95	53.282	Chinchilla_lanigera
ENSELUG00000002264	rnpc3	98	50.657	ENSCSAG00000001519	RNPC3	95	53.155	Chlorocebus_sabaeus
ENSELUG00000002264	rnpc3	97	54.669	ENSCPBG00000028311	RNPC3	95	54.086	Chrysemys_picta_bellii
ENSELUG00000002264	rnpc3	96	37.255	ENSCING00000021276	-	99	38.310	Ciona_intestinalis
ENSELUG00000002264	rnpc3	65	47.500	ENSCSAVG00000002800	-	74	57.851	Ciona_savignyi
ENSELUG00000002264	rnpc3	98	50.844	ENSCANG00000031444	RNPC3	95	53.346	Colobus_angolensis_palliatus
ENSELUG00000002264	rnpc3	97	52.863	ENSCGRG00001019276	Rnpc3	95	53.891	Cricetulus_griseus_chok1gshd
ENSELUG00000002264	rnpc3	89	51.346	ENSCGRG00000000053	Rnpc3	99	52.431	Cricetulus_griseus_crigri
ENSELUG00000002264	rnpc3	99	62.429	ENSCSEG00000013475	rnpc3	99	64.516	Cynoglossus_semilaevis
ENSELUG00000002264	rnpc3	99	66.412	ENSCVAG00000002645	rnpc3	99	68.130	Cyprinodon_variegatus
ENSELUG00000002264	rnpc3	99	68.208	ENSDARG00000011247	rnpc3	99	67.437	Danio_rerio
ENSELUG00000002264	rnpc3	97	49.812	ENSDNOG00000044555	-	95	51.429	Dasypus_novemcinctus
ENSELUG00000002264	rnpc3	97	50.188	ENSDNOG00000047498	-	95	51.810	Dasypus_novemcinctus
ENSELUG00000002264	rnpc3	97	50.854	ENSDORG00000027343	Rnpc3	95	52.998	Dipodomys_ordii
ENSELUG00000002264	rnpc3	96	48.190	ENSEBUG00000002068	rnpc3	96	48.752	Eptatretus_burgeri
ENSELUG00000002264	rnpc3	97	51.803	ENSEASG00005015957	RNPC3	95	53.876	Equus_asinus_asinus
ENSELUG00000002264	rnpc3	97	51.803	ENSECAG00000021148	RNPC3	95	53.876	Equus_caballus
ENSELUG00000002264	rnpc3	97	51.810	ENSFCAG00000024312	RNPC3	96	54.440	Felis_catus
ENSELUG00000002264	rnpc3	89	55.106	ENSFALG00000002580	RNPC3	99	55.106	Ficedula_albicollis
ENSELUG00000002264	rnpc3	97	50.662	ENSFDAG00000019948	RNPC3	95	53.372	Fukomys_damarensis
ENSELUG00000002264	rnpc3	99	61.804	ENSFHEG00000020647	rnpc3	99	63.340	Fundulus_heteroclitus
ENSELUG00000002264	rnpc3	99	67.304	ENSGMOG00000019213	rnpc3	98	67.754	Gadus_morhua
ENSELUG00000002264	rnpc3	97	55.058	ENSGALG00000005162	RNPC3	89	54.669	Gallus_gallus
ENSELUG00000002264	rnpc3	99	64.762	ENSGAFG00000017236	rnpc3	99	66.603	Gambusia_affinis
ENSELUG00000002264	rnpc3	99	64.875	ENSGACG00000002048	rnpc3	99	67.816	Gasterosteus_aculeatus
ENSELUG00000002264	rnpc3	97	55.126	ENSGAGG00000008438	RNPC3	95	54.352	Gopherus_agassizii
ENSELUG00000002264	rnpc3	97	48.919	ENSGGOG00000026201	-	93	48.323	Gorilla_gorilla
ENSELUG00000002264	rnpc3	82	65.803	ENSHBUG00000015966	rnpc3	85	67.010	Haplochromis_burtoni
ENSELUG00000002264	rnpc3	97	50.191	ENSHGLG00000001708	RNPC3	95	53.113	Heterocephalus_glaber_female
ENSELUG00000002264	rnpc3	97	50.191	ENSHGLG00100003005	RNPC3	95	53.113	Heterocephalus_glaber_male
ENSELUG00000002264	rnpc3	97	66.019	ENSHCOG00000017135	rnpc3	97	66.860	Hippocampus_comes
ENSELUG00000002264	rnpc3	99	65.643	ENSIPUG00000002916	rnpc3	99	65.643	Ictalurus_punctatus
ENSELUG00000002264	rnpc3	97	51.985	ENSSTOG00000025020	RNPC3	95	52.987	Ictidomys_tridecemlineatus
ENSELUG00000002264	rnpc3	96	50.867	ENSJJAG00000010203	Rnpc3	96	53.295	Jaculus_jaculus
ENSELUG00000002264	rnpc3	99	65.962	ENSKMAG00000017358	rnpc3	99	67.754	Kryptolebias_marmoratus
ENSELUG00000002264	rnpc3	99	65.134	ENSLBEG00000024901	rnpc3	97	67.625	Labrus_bergylta
ENSELUG00000002264	rnpc3	98	57.280	ENSLACG00000005720	RNPC3	92	58.429	Latimeria_chalumnae
ENSELUG00000002264	rnpc3	99	63.707	ENSLOCG00000007986	rnpc3	99	64.286	Lepisosteus_oculatus
ENSELUG00000002264	rnpc3	97	51.946	ENSLAFG00000032342	RNPC3	95	52.621	Loxodonta_africana
ENSELUG00000002264	rnpc3	97	41.051	ENSMFAG00000002917	-	95	41.634	Macaca_fascicularis
ENSELUG00000002264	rnpc3	98	50.844	ENSMFAG00000002004	RNPC3	95	53.346	Macaca_fascicularis
ENSELUG00000002264	rnpc3	98	50.657	ENSMMUG00000018039	RNPC3	95	53.155	Macaca_mulatta
ENSELUG00000002264	rnpc3	80	48.404	ENSMMUG00000002098	-	94	41.961	Macaca_mulatta
ENSELUG00000002264	rnpc3	98	49.531	ENSMNEG00000033950	RNPC3	95	50.287	Macaca_nemestrina
ENSELUG00000002264	rnpc3	97	39.922	ENSMNEG00000029209	-	95	40.705	Macaca_nemestrina
ENSELUG00000002264	rnpc3	97	40.927	ENSMLEG00000034644	-	95	40.980	Mandrillus_leucophaeus
ENSELUG00000002264	rnpc3	98	50.844	ENSMLEG00000033628	RNPC3	95	53.346	Mandrillus_leucophaeus
ENSELUG00000002264	rnpc3	98	60.700	ENSMAMG00000007496	rnpc3	98	62.330	Mastacembelus_armatus
ENSELUG00000002264	rnpc3	99	66.667	ENSMZEG00005020233	rnpc3	99	68.008	Maylandia_zebra
ENSELUG00000002264	rnpc3	89	55.745	ENSMGAG00000006381	RNPC3	99	55.319	Meleagris_gallopavo
ENSELUG00000002264	rnpc3	97	53.346	ENSMAUG00000001358	Rnpc3	95	54.386	Mesocricetus_auratus
ENSELUG00000002264	rnpc3	97	54.545	ENSMICG00000029591	RNPC3	95	53.620	Microcebus_murinus
ENSELUG00000002264	rnpc3	97	53.435	ENSMOCG00000013423	Rnpc3	95	54.669	Microtus_ochrogaster
ENSELUG00000002264	rnpc3	99	63.340	ENSMMOG00000005309	rnpc3	99	64.751	Mola_mola
ENSELUG00000002264	rnpc3	97	52.353	ENSMODG00000002946	RNPC3	95	53.725	Monodelphis_domestica
ENSELUG00000002264	rnpc3	98	63.462	ENSMALG00000015471	rnpc3	99	65.769	Monopterus_albus
ENSELUG00000002264	rnpc3	97	53.065	MGP_CAROLIEiJ_G0025555	Rnpc3	97	54.492	Mus_caroli
ENSELUG00000002264	rnpc3	97	53.435	ENSMUSG00000027981	Rnpc3	99	53.926	Mus_musculus
ENSELUG00000002264	rnpc3	97	53.143	MGP_PahariEiJ_G0027001	Rnpc3	97	54.440	Mus_pahari
ENSELUG00000002264	rnpc3	97	53.626	MGP_SPRETEiJ_G0026505	Rnpc3	97	54.864	Mus_spretus
ENSELUG00000002264	rnpc3	97	51.243	ENSMPUG00000007349	RNPC3	95	53.891	Mustela_putorius_furo
ENSELUG00000002264	rnpc3	97	51.705	ENSMLUG00000028743	RNPC3	94	53.307	Myotis_lucifugus
ENSELUG00000002264	rnpc3	97	51.718	ENSNGAG00000010939	Rnpc3	96	54.669	Nannospalax_galili
ENSELUG00000002264	rnpc3	99	66.795	ENSNBRG00000012196	rnpc3	96	68.199	Neolamprologus_brichardi
ENSELUG00000002264	rnpc3	97	51.124	ENSNLEG00000012013	RNPC3	95	53.321	Nomascus_leucogenys
ENSELUG00000002264	rnpc3	97	53.786	ENSODEG00000007612	RNPC3	95	53.398	Octodon_degus
ENSELUG00000002264	rnpc3	99	67.052	ENSONIG00000004770	rnpc3	100	69.608	Oreochromis_niloticus
ENSELUG00000002264	rnpc3	91	50.810	ENSOANG00000008220	RNPC3	99	53.512	Ornithorhynchus_anatinus
ENSELUG00000002264	rnpc3	97	51.751	ENSOCUG00000004016	RNPC3	95	52.918	Oryctolagus_cuniculus
ENSELUG00000002264	rnpc3	99	64.190	ENSORLG00000005694	rnpc3	99	64.381	Oryzias_latipes
ENSELUG00000002264	rnpc3	99	64.952	ENSORLG00020005513	rnpc3	99	65.143	Oryzias_latipes_hni
ENSELUG00000002264	rnpc3	99	64.571	ENSORLG00015002179	rnpc3	99	64.762	Oryzias_latipes_hsok
ENSELUG00000002264	rnpc3	98	65.896	ENSOMEG00000017737	rnpc3	99	66.089	Oryzias_melastigma
ENSELUG00000002264	rnpc3	97	55.319	ENSOGAG00000026182	RNPC3	95	54.207	Otolemur_garnettii
ENSELUG00000002264	rnpc3	97	54.143	ENSOARG00000018719	RNPC3	95	52.762	Ovis_aries
ENSELUG00000002264	rnpc3	97	51.036	ENSPPAG00000037459	RNPC3	95	53.131	Pan_paniscus
ENSELUG00000002264	rnpc3	97	49.312	ENSPPAG00000030278	-	94	48.915	Pan_paniscus
ENSELUG00000002264	rnpc3	97	51.816	ENSPPRG00000020246	RNPC3	96	54.264	Panthera_pardus
ENSELUG00000002264	rnpc3	97	51.816	ENSPTIG00000009887	RNPC3	98	54.264	Panthera_tigris_altaica
ENSELUG00000002264	rnpc3	96	48.611	ENSPTRG00000044227	-	94	48.406	Pan_troglodytes
ENSELUG00000002264	rnpc3	97	50.943	ENSPTRG00000033902	RNPC3	95	53.462	Pan_troglodytes
ENSELUG00000002264	rnpc3	98	50.936	ENSPANG00000012137	RNPC3	95	53.435	Papio_anubis
ENSELUG00000002264	rnpc3	97	42.447	ENSPANG00000029957	-	96	43.665	Papio_anubis
ENSELUG00000002264	rnpc3	99	67.692	ENSPKIG00000008828	rnpc3	99	69.290	Paramormyrops_kingsleyae
ENSELUG00000002264	rnpc3	65	50.862	ENSPSIG00000007396	RNPC3	99	50.862	Pelodiscus_sinensis
ENSELUG00000002264	rnpc3	98	60.311	ENSPMGG00000011742	rnpc3	96	61.155	Periophthalmus_magnuspinnatus
ENSELUG00000002264	rnpc3	89	51.760	ENSPEMG00000020112	Rnpc3	99	53.066	Peromyscus_maniculatus_bairdii
ENSELUG00000002264	rnpc3	97	50.383	ENSPCIG00000004415	-	95	53.725	Phascolarctos_cinereus
ENSELUG00000002264	rnpc3	99	64.773	ENSPFOG00000009895	rnpc3	99	67.424	Poecilia_formosa
ENSELUG00000002264	rnpc3	99	64.583	ENSPLAG00000012023	rnpc3	99	67.235	Poecilia_latipinna
ENSELUG00000002264	rnpc3	99	65.076	ENSPMEG00000003663	rnpc3	99	67.614	Poecilia_mexicana
ENSELUG00000002264	rnpc3	98	65.058	ENSPREG00000010206	rnpc3	99	67.366	Poecilia_reticulata
ENSELUG00000002264	rnpc3	81	48.661	ENSPPYG00000001102	RNPC3	94	49.772	Pongo_abelii
ENSELUG00000002264	rnpc3	99	66.411	ENSPNYG00000020603	rnpc3	99	67.816	Pundamilia_nyererei
ENSELUG00000002264	rnpc3	99	59.023	ENSPNAG00000000524	rnpc3	92	59.774	Pygocentrus_nattereri
ENSELUG00000002264	rnpc3	97	55.469	ENSRNOG00000017310	Rnpc3	95	54.883	Rattus_norvegicus
ENSELUG00000002264	rnpc3	98	49.251	ENSRBIG00000043897	RNPC3	95	49.434	Rhinopithecus_bieti
ENSELUG00000002264	rnpc3	98	50.844	ENSRROG00000032334	RNPC3	95	53.346	Rhinopithecus_roxellana
ENSELUG00000002264	rnpc3	97	51.032	ENSSBOG00000024473	RNPC3	95	53.551	Saimiri_boliviensis_boliviensis
ENSELUG00000002264	rnpc3	97	54.118	ENSSHAG00000011859	RNPC3	95	52.941	Sarcophilus_harrisii
ENSELUG00000002264	rnpc3	99	70.769	ENSSFOG00015013055	rnpc3	99	71.063	Scleropages_formosus
ENSELUG00000002264	rnpc3	99	66.667	ENSSMAG00000020346	rnpc3	99	68.381	Scophthalmus_maximus
ENSELUG00000002264	rnpc3	99	69.157	ENSSDUG00000006600	rnpc3	99	69.866	Seriola_dumerili
ENSELUG00000002264	rnpc3	99	69.349	ENSSLDG00000007979	rnpc3	99	70.058	Seriola_lalandi_dorsalis
ENSELUG00000002264	rnpc3	82	61.818	ENSSPUG00000003872	-	88	61.818	Sphenodon_punctatus
ENSELUG00000002264	rnpc3	95	55.888	ENSSPUG00000008539	-	94	54.776	Sphenodon_punctatus
ENSELUG00000002264	rnpc3	97	68.039	ENSSPAG00000005633	rnpc3	97	70.059	Stegastes_partitus
ENSELUG00000002264	rnpc3	97	54.102	ENSSSCG00000037254	RNPC3	95	53.906	Sus_scrofa
ENSELUG00000002264	rnpc3	89	55.437	ENSTGUG00000004795	-	99	55.864	Taeniopygia_guttata
ENSELUG00000002264	rnpc3	99	66.092	ENSTNIG00000018963	rnpc3	99	67.495	Tetraodon_nigroviridis
ENSELUG00000002264	rnpc3	97	51.538	ENSUMAG00000007775	RNPC3	97	53.906	Ursus_maritimus
ENSELUG00000002264	rnpc3	97	51.154	ENSVVUG00000000331	RNPC3	95	53.425	Vulpes_vulpes
ENSELUG00000002264	rnpc3	95	45.455	ENSXETG00000025027	rnpc3	95	44.334	Xenopus_tropicalis
ENSELUG00000002264	rnpc3	99	64.083	ENSXCOG00000005013	rnpc3	99	65.217	Xiphophorus_couchianus
ENSELUG00000002264	rnpc3	99	65.143	ENSXMAG00000006495	rnpc3	99	66.857	Xiphophorus_maculatus