EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000002295 (Gene tree)
Gene ID: 105011887
Gene Symbol: rad54l
Alias: zgc:56289
Full Name: RAD54 like
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 7325 bases
Position: chrLG08:24899399-24906723
Accession: 105011887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000000763	ResIII	PF04851.15	6.7e-08	1	1
ENSELUP00000000763	DEAD	PF00270.29	2.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000018554	-	2485	XM_010872324	ENSELUP00000000763	745 (aa)	XP_010870626	UPI000576F5CA

Gene Model

Click here to download ENSELUG00000002295's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03440	Homologous recombination	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000002295's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000002295	rad54l	84	44.562	ENSELUG00000009287	rad54b	70	44.495
ENSELUG00000002295	rad54l	73	30.964	ENSELUG00000007917	ercc6l	50	30.481

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000002295	rad54l	99	81.041	ENSG00000085999	RAD54L	100	88.000	Homo_sapiens
ENSELUG00000002295	rad54l	99	85.906	ENSAPOG00000011643	rad54l	99	85.906	Acanthochromis_polyacanthus
ENSELUG00000002295	rad54l	99	79.813	ENSAMEG00000013902	RAD54L	99	79.813	Ailuropoda_melanoleuca
ENSELUG00000002295	rad54l	99	86.309	ENSACIG00000001939	rad54l	99	86.309	Amphilophus_citrinellus
ENSELUG00000002295	rad54l	99	89.142	ENSAOCG00000017576	rad54l	100	89.142	Amphiprion_ocellaris
ENSELUG00000002295	rad54l	96	89.694	ENSAPEG00000020658	rad54l	98	89.694	Amphiprion_percula
ENSELUG00000002295	rad54l	94	90.327	ENSATEG00000006767	rad54l	99	90.327	Anabas_testudineus
ENSELUG00000002295	rad54l	94	84.068	ENSAPLG00000006389	RAD54L	99	84.068	Anas_platyrhynchos
ENSELUG00000002295	rad54l	99	82.731	ENSACAG00000002312	RAD54L	99	82.731	Anolis_carolinensis
ENSELUG00000002295	rad54l	99	80.774	ENSANAG00000035439	RAD54L	99	80.774	Aotus_nancymaae
ENSELUG00000002295	rad54l	100	84.987	ENSACLG00000018711	rad54l	100	84.987	Astatotilapia_calliptera
ENSELUG00000002295	rad54l	100	89.572	ENSAMXG00000012777	rad54l	100	89.439	Astyanax_mexicanus
ENSELUG00000002295	rad54l	99	80.641	ENSBTAG00000019901	RAD54L	99	80.641	Bos_taurus
ENSELUG00000002295	rad54l	91	59.057	WBGene00004298	rad-54	83	59.057	Caenorhabditis_elegans
ENSELUG00000002295	rad54l	99	78.800	ENSCJAG00000021080	RAD54L	95	78.800	Callithrix_jacchus
ENSELUG00000002295	rad54l	99	79.840	ENSCAFG00000004272	RAD54L	99	79.840	Canis_familiaris
ENSELUG00000002295	rad54l	99	79.813	ENSCAFG00020015066	RAD54L	99	79.813	Canis_lupus_dingo
ENSELUG00000002295	rad54l	99	80.481	ENSCHIG00000020118	RAD54L	99	80.481	Capra_hircus
ENSELUG00000002295	rad54l	99	80.000	ENSTSYG00000002032	RAD54L	99	80.000	Carlito_syrichta
ENSELUG00000002295	rad54l	99	80.908	ENSCPOG00000006768	RAD54L	99	80.908	Cavia_porcellus
ENSELUG00000002295	rad54l	99	80.908	ENSCCAG00000025783	RAD54L	99	80.908	Cebus_capucinus
ENSELUG00000002295	rad54l	99	81.175	ENSCATG00000030589	RAD54L	99	81.175	Cercocebus_atys
ENSELUG00000002295	rad54l	99	81.175	ENSCLAG00000004645	RAD54L	99	81.175	Chinchilla_lanigera
ENSELUG00000002295	rad54l	99	81.041	ENSCSAG00000001229	RAD54L	99	81.041	Chlorocebus_sabaeus
ENSELUG00000002295	rad54l	99	82.597	ENSCPBG00000005675	RAD54L	99	82.597	Chrysemys_picta_bellii
ENSELUG00000002295	rad54l	100	63.566	ENSCING00000024456	-	100	63.566	Ciona_intestinalis
ENSELUG00000002295	rad54l	100	64.026	ENSCSAVG00000010859	-	100	64.026	Ciona_savignyi
ENSELUG00000002295	rad54l	99	81.041	ENSCANG00000034891	RAD54L	99	81.041	Colobus_angolensis_palliatus
ENSELUG00000002295	rad54l	99	79.573	ENSCGRG00001014807	Rad54l	99	79.573	Cricetulus_griseus_chok1gshd
ENSELUG00000002295	rad54l	99	79.573	ENSCGRG00000016038	Rad54l	99	79.573	Cricetulus_griseus_crigri
ENSELUG00000002295	rad54l	99	86.193	ENSCSEG00000001983	rad54l	99	86.193	Cynoglossus_semilaevis
ENSELUG00000002295	rad54l	77	87.649	ENSCVAG00000019561	rad54l	100	87.649	Cyprinodon_variegatus
ENSELUG00000002295	rad54l	100	88.086	ENSDARG00000018623	rad54l	100	88.086	Danio_rerio
ENSELUG00000002295	rad54l	99	80.107	ENSDNOG00000003395	RAD54L	99	80.107	Dasypus_novemcinctus
ENSELUG00000002295	rad54l	99	72.391	ENSDORG00000002632	Rad54l	99	72.655	Dipodomys_ordii
ENSELUG00000002295	rad54l	99	53.947	FBgn0002989	okr	95	53.947	Drosophila_melanogaster
ENSELUG00000002295	rad54l	78	79.176	ENSETEG00000000550	RAD54L	78	79.176	Echinops_telfairi
ENSELUG00000002295	rad54l	99	80.080	ENSEASG00005004511	RAD54L	99	80.080	Equus_asinus_asinus
ENSELUG00000002295	rad54l	99	80.507	ENSECAG00000008760	RAD54L	99	80.507	Equus_caballus
ENSELUG00000002295	rad54l	99	77.303	ENSEEUG00000008113	RAD54L	99	77.303	Erinaceus_europaeus
ENSELUG00000002295	rad54l	99	79.573	ENSFCAG00000003444	RAD54L	99	79.573	Felis_catus
ENSELUG00000002295	rad54l	99	82.062	ENSFALG00000009480	RAD54L	99	82.195	Ficedula_albicollis
ENSELUG00000002295	rad54l	99	80.240	ENSFDAG00000007806	RAD54L	99	80.240	Fukomys_damarensis
ENSELUG00000002295	rad54l	67	79.477	ENSFHEG00000009824	rad54l	83	79.477	Fundulus_heteroclitus
ENSELUG00000002295	rad54l	99	87.634	ENSGMOG00000014568	rad54l	100	87.634	Gadus_morhua
ENSELUG00000002295	rad54l	99	82.550	ENSGALG00000010356	RAD54L	92	82.550	Gallus_gallus
ENSELUG00000002295	rad54l	91	84.536	ENSGAFG00000011110	rad54l	100	84.536	Gambusia_affinis
ENSELUG00000002295	rad54l	100	88.322	ENSGACG00000003111	rad54l	98	88.322	Gasterosteus_aculeatus
ENSELUG00000002295	rad54l	99	81.903	ENSGAGG00000014089	RAD54L	96	81.903	Gopherus_agassizii
ENSELUG00000002295	rad54l	99	80.908	ENSGGOG00000010602	RAD54L	99	80.908	Gorilla_gorilla
ENSELUG00000002295	rad54l	100	85.255	ENSHBUG00000007793	rad54l	100	85.255	Haplochromis_burtoni
ENSELUG00000002295	rad54l	99	80.908	ENSHGLG00000000753	RAD54L	99	80.908	Heterocephalus_glaber_female
ENSELUG00000002295	rad54l	99	80.774	ENSHGLG00100016987	RAD54L	99	80.774	Heterocephalus_glaber_male
ENSELUG00000002295	rad54l	100	87.785	ENSIPUG00000015999	rad54l	100	90.272	Ictalurus_punctatus
ENSELUG00000002295	rad54l	99	80.107	ENSSTOG00000029125	RAD54L	99	80.107	Ictidomys_tridecemlineatus
ENSELUG00000002295	rad54l	99	67.423	ENSJJAG00000000235	-	99	67.290	Jaculus_jaculus
ENSELUG00000002295	rad54l	100	86.345	ENSKMAG00000009944	rad54l	100	86.345	Kryptolebias_marmoratus
ENSELUG00000002295	rad54l	99	88.679	ENSLBEG00000014617	rad54l	99	90.511	Labrus_bergylta
ENSELUG00000002295	rad54l	100	89.410	ENSLOCG00000004144	rad54l	100	90.533	Lepisosteus_oculatus
ENSELUG00000002295	rad54l	99	80.214	ENSLAFG00000007583	RAD54L	99	80.615	Loxodonta_africana
ENSELUG00000002295	rad54l	99	81.175	ENSMFAG00000031241	RAD54L	99	81.175	Macaca_fascicularis
ENSELUG00000002295	rad54l	99	81.175	ENSMMUG00000011568	RAD54L	99	81.175	Macaca_mulatta
ENSELUG00000002295	rad54l	99	81.041	ENSMNEG00000038562	RAD54L	99	81.041	Macaca_nemestrina
ENSELUG00000002295	rad54l	99	81.175	ENSMLEG00000038145	RAD54L	99	81.175	Mandrillus_leucophaeus
ENSELUG00000002295	rad54l	99	85.734	ENSMAMG00000022180	rad54l	99	88.496	Mastacembelus_armatus
ENSELUG00000002295	rad54l	100	84.853	ENSMZEG00005018081	rad54l	100	84.853	Maylandia_zebra
ENSELUG00000002295	rad54l	99	82.527	ENSMGAG00000010634	RAD54L	99	82.527	Meleagris_gallopavo
ENSELUG00000002295	rad54l	99	79.973	ENSMAUG00000020076	Rad54l	99	79.973	Mesocricetus_auratus
ENSELUG00000002295	rad54l	99	80.908	ENSMICG00000003266	RAD54L	99	80.908	Microcebus_murinus
ENSELUG00000002295	rad54l	99	80.374	ENSMOCG00000001778	Rad54l	99	80.374	Microtus_ochrogaster
ENSELUG00000002295	rad54l	99	84.409	ENSMALG00000021148	rad54l	99	84.409	Monopterus_albus
ENSELUG00000002295	rad54l	99	75.714	MGP_CAROLIEiJ_G0026325	Rad54l	99	75.714	Mus_caroli
ENSELUG00000002295	rad54l	99	79.840	ENSMUSG00000028702	Rad54l	99	79.840	Mus_musculus
ENSELUG00000002295	rad54l	99	79.706	MGP_PahariEiJ_G0028657	Rad54l	99	79.706	Mus_pahari
ENSELUG00000002295	rad54l	99	79.973	MGP_SPRETEiJ_G0027297	Rad54l	99	79.973	Mus_spretus
ENSELUG00000002295	rad54l	99	80.107	ENSMPUG00000012883	RAD54L	99	80.107	Mustela_putorius_furo
ENSELUG00000002295	rad54l	99	80.882	ENSMLUG00000003763	RAD54L	99	80.882	Myotis_lucifugus
ENSELUG00000002295	rad54l	99	79.813	ENSNGAG00000024213	Rad54l	99	79.813	Nannospalax_galili
ENSELUG00000002295	rad54l	99	80.774	ENSNLEG00000016548	RAD54L	99	80.774	Nomascus_leucogenys
ENSELUG00000002295	rad54l	91	79.259	ENSMEUG00000006793	RAD54L	100	79.259	Notamacropus_eugenii
ENSELUG00000002295	rad54l	90	83.624	ENSOPRG00000016016	RAD54L	90	83.624	Ochotona_princeps
ENSELUG00000002295	rad54l	99	81.175	ENSODEG00000008519	RAD54L	99	81.175	Octodon_degus
ENSELUG00000002295	rad54l	100	84.987	ENSONIG00000007659	rad54l	100	84.987	Oreochromis_niloticus
ENSELUG00000002295	rad54l	99	80.507	ENSOCUG00000005229	RAD54L	99	80.507	Oryctolagus_cuniculus
ENSELUG00000002295	rad54l	100	84.605	ENSORLG00000002958	rad54l	100	85.141	Oryzias_latipes
ENSELUG00000002295	rad54l	99	85.389	ENSORLG00020006554	rad54l	99	88.563	Oryzias_latipes_hni
ENSELUG00000002295	rad54l	100	85.007	ENSORLG00015002907	rad54l	100	85.542	Oryzias_latipes_hsok
ENSELUG00000002295	rad54l	99	85.753	ENSOMEG00000007770	rad54l	99	85.753	Oryzias_melastigma
ENSELUG00000002295	rad54l	99	80.667	ENSOARG00000002264	RAD54L	99	80.667	Ovis_aries
ENSELUG00000002295	rad54l	99	80.908	ENSPPAG00000031222	RAD54L	99	80.908	Pan_paniscus
ENSELUG00000002295	rad54l	99	79.573	ENSPPRG00000010317	RAD54L	99	79.573	Panthera_pardus
ENSELUG00000002295	rad54l	99	79.573	ENSPTIG00000012200	RAD54L	99	79.573	Panthera_tigris_altaica
ENSELUG00000002295	rad54l	99	80.908	ENSPTRG00000000689	RAD54L	99	80.908	Pan_troglodytes
ENSELUG00000002295	rad54l	99	81.175	ENSPANG00000016295	RAD54L	99	81.175	Papio_anubis
ENSELUG00000002295	rad54l	99	81.806	ENSPKIG00000016172	rad54l	99	81.806	Paramormyrops_kingsleyae
ENSELUG00000002295	rad54l	99	82.249	ENSPSIG00000003258	RAD54L	99	82.249	Pelodiscus_sinensis
ENSELUG00000002295	rad54l	99	79.946	ENSPMGG00000016335	rad54l	99	79.946	Periophthalmus_magnuspinnatus
ENSELUG00000002295	rad54l	99	79.973	ENSPEMG00000011422	Rad54l	99	79.973	Peromyscus_maniculatus_bairdii
ENSELUG00000002295	rad54l	99	71.409	ENSPMAG00000007719	rad54l	99	71.409	Petromyzon_marinus
ENSELUG00000002295	rad54l	100	80.723	ENSPCIG00000029032	RAD54L	100	80.991	Phascolarctos_cinereus
ENSELUG00000002295	rad54l	86	87.598	ENSPFOG00000013732	rad54l	99	87.598	Poecilia_formosa
ENSELUG00000002295	rad54l	82	85.900	ENSPLAG00000023416	rad54l	99	85.900	Poecilia_latipinna
ENSELUG00000002295	rad54l	91	84.831	ENSPMEG00000008299	rad54l	100	84.831	Poecilia_mexicana
ENSELUG00000002295	rad54l	100	84.161	ENSPREG00000019955	rad54l	100	84.161	Poecilia_reticulata
ENSELUG00000002295	rad54l	99	68.933	ENSPPYG00000001398	RAD54L	99	68.933	Pongo_abelii
ENSELUG00000002295	rad54l	79	83.333	ENSPCAG00000005323	RAD54L	79	83.333	Procavia_capensis
ENSELUG00000002295	rad54l	99	80.641	ENSPCOG00000015423	RAD54L	99	80.641	Propithecus_coquereli
ENSELUG00000002295	rad54l	99	81.142	ENSPNYG00000002942	rad54l	99	81.142	Pundamilia_nyererei
ENSELUG00000002295	rad54l	100	88.889	ENSPNAG00000012483	rad54l	100	88.889	Pygocentrus_nattereri
ENSELUG00000002295	rad54l	99	80.107	ENSRNOG00000013148	Rad54l	99	80.107	Rattus_norvegicus
ENSELUG00000002295	rad54l	99	81.041	ENSRBIG00000043495	RAD54L	99	81.041	Rhinopithecus_bieti
ENSELUG00000002295	rad54l	99	81.175	ENSRROG00000020844	RAD54L	99	81.175	Rhinopithecus_roxellana
ENSELUG00000002295	rad54l	80	49.224	YGL163C	RAD54	71	49.224	Saccharomyces_cerevisiae
ENSELUG00000002295	rad54l	99	81.041	ENSSBOG00000024672	RAD54L	99	81.041	Saimiri_boliviensis_boliviensis
ENSELUG00000002295	rad54l	100	80.641	ENSSHAG00000000110	RAD54L	100	80.641	Sarcophilus_harrisii
ENSELUG00000002295	rad54l	100	88.725	ENSSDUG00000019147	rad54l	100	88.725	Seriola_dumerili
ENSELUG00000002295	rad54l	100	88.725	ENSSLDG00000012330	rad54l	100	88.725	Seriola_lalandi_dorsalis
ENSELUG00000002295	rad54l	84	78.754	ENSSARG00000006689	RAD54L	100	78.754	Sorex_araneus
ENSELUG00000002295	rad54l	99	87.802	ENSSPAG00000011016	rad54l	100	87.802	Stegastes_partitus
ENSELUG00000002295	rad54l	99	81.041	ENSSSCG00000003905	RAD54L	99	81.041	Sus_scrofa
ENSELUG00000002295	rad54l	99	81.526	ENSTGUG00000008233	RAD54L	99	81.928	Taeniopygia_guttata
ENSELUG00000002295	rad54l	99	82.527	ENSTRUG00000008410	rad54l	99	82.527	Takifugu_rubripes
ENSELUG00000002295	rad54l	99	79.195	ENSTNIG00000004716	rad54l	99	79.570	Tetraodon_nigroviridis
ENSELUG00000002295	rad54l	99	74.900	ENSTTRG00000006315	RAD54L	99	74.900	Tursiops_truncatus
ENSELUG00000002295	rad54l	99	79.704	ENSUAMG00000011824	RAD54L	99	79.704	Ursus_americanus
ENSELUG00000002295	rad54l	99	78.629	ENSUMAG00000023603	RAD54L	99	78.629	Ursus_maritimus
ENSELUG00000002295	rad54l	99	79.706	ENSVVUG00000007201	RAD54L	99	79.706	Vulpes_vulpes
ENSELUG00000002295	rad54l	94	77.904	ENSXETG00000004369	rad54l	98	77.904	Xenopus_tropicalis
ENSELUG00000002295	rad54l	55	82.282	ENSXCOG00000016028	rad54l	82	85.079	Xiphophorus_couchianus