EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000002333 (Gene tree)
Gene ID: 105016896
Gene Symbol: patz1
Alias: -
Full Name: POZ/BTB and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 12506 bases
Position: chrLG17:12254824-12267329
Accession: 105016896
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000000788	zf-C2H2	PF00096.26	2e-26	1	4
ENSELUP00000000788	zf-C2H2	PF00096.26	2e-26	2	4
ENSELUP00000000788	zf-C2H2	PF00096.26	2e-26	3	4
ENSELUP00000000788	zf-C2H2	PF00096.26	2e-26	4	4
ENSELUP00000000779	zf-C2H2	PF00096.26	2.8e-20	1	3
ENSELUP00000000779	zf-C2H2	PF00096.26	2.8e-20	2	3
ENSELUP00000000779	zf-C2H2	PF00096.26	2.8e-20	3	3
ENSELUP00000000788	zf-met	PF12874.7	0.00015	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000018486	-	6204	XM_020055810	ENSELUP00000000788	788 (aa)	XP_019911369	UPI00097333B2
ENSELUT00000018489	-	5838	XM_010881043	ENSELUP00000000779	666 (aa)	XP_010879345	UPI0005767FDB

Gene Model

Click here to download ENSELUG00000002333's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000002333's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000002333	patz1	51	40.260	ENSELUG00000019383	zbtb34	55	40.260
ENSELUG00000002333	patz1	71	35.537	ENSELUG00000006734	-	97	37.615
ENSELUG00000002333	patz1	50	35.333	ENSELUG00000005894	prdm5	72	37.126
ENSELUG00000002333	patz1	53	32.593	ENSELUG00000018405	-	83	33.449
ENSELUG00000002333	patz1	50	32.353	ENSELUG00000021551	-	76	33.133
ENSELUG00000002333	patz1	52	34.694	ENSELUG00000014779	zbtb16a	57	33.333
ENSELUG00000002333	patz1	72	36.111	ENSELUG00000019277	zbtb14	98	32.487

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000002333	patz1	100	58.166	ENSG00000100105	PATZ1	99	61.887	Homo_sapiens
ENSELUG00000002333	patz1	100	76.984	ENSAPOG00000018447	patz1	100	76.984	Acanthochromis_polyacanthus
ENSELUG00000002333	patz1	100	60.381	ENSAMEG00000007074	PATZ1	100	60.481	Ailuropoda_melanoleuca
ENSELUG00000002333	patz1	100	69.576	ENSACIG00000016779	patz1	100	74.731	Amphilophus_citrinellus
ENSELUG00000002333	patz1	100	76.740	ENSAPEG00000013354	patz1	100	76.740	Amphiprion_percula
ENSELUG00000002333	patz1	100	75.149	ENSATEG00000011260	patz1	100	75.149	Anabas_testudineus
ENSELUG00000002333	patz1	90	59.252	ENSAPLG00000003934	PATZ1	99	53.281	Anas_platyrhynchos
ENSELUG00000002333	patz1	100	58.166	ENSANAG00000029603	PATZ1	99	61.887	Aotus_nancymaae
ENSELUG00000002333	patz1	100	69.539	ENSAMXG00000002273	patz1	100	67.225	Astyanax_mexicanus
ENSELUG00000002333	patz1	100	60.139	ENSBTAG00000005478	PATZ1	99	62.075	Bos_taurus
ENSELUG00000002333	patz1	100	58.166	ENSCJAG00000010978	PATZ1	99	61.887	Callithrix_jacchus
ENSELUG00000002333	patz1	100	60.139	ENSCAFG00000013087	PATZ1	100	60.481	Canis_familiaris
ENSELUG00000002333	patz1	100	60.139	ENSCHIG00000020203	PATZ1	99	62.075	Capra_hircus
ENSELUG00000002333	patz1	100	58.166	ENSTSYG00000033183	PATZ1	99	61.887	Carlito_syrichta
ENSELUG00000002333	patz1	100	58.166	ENSCCAG00000028772	PATZ1	99	61.887	Cebus_capucinus
ENSELUG00000002333	patz1	100	58.166	ENSCATG00000006101	PATZ1	99	61.626	Cercocebus_atys
ENSELUG00000002333	patz1	100	55.571	ENSCPBG00000011277	PATZ1	100	59.898	Chrysemys_picta_bellii
ENSELUG00000002333	patz1	100	58.166	ENSCANG00000024972	PATZ1	99	61.626	Colobus_angolensis_palliatus
ENSELUG00000002333	patz1	100	60.474	ENSCGRG00001004071	Patz1	99	59.811	Cricetulus_griseus_chok1gshd
ENSELUG00000002333	patz1	93	56.991	ENSCGRG00000004814	Patz1	99	60.000	Cricetulus_griseus_crigri
ENSELUG00000002333	patz1	100	65.079	ENSCSEG00000001385	patz1	100	71.658	Cynoglossus_semilaevis
ENSELUG00000002333	patz1	100	75.348	ENSCVAG00000007684	patz1	100	75.746	Cyprinodon_variegatus
ENSELUG00000002333	patz1	100	73.022	ENSDARG00000076584	patz1	100	73.022	Danio_rerio
ENSELUG00000002333	patz1	88	53.927	ENSDNOG00000003183	PATZ1	100	53.904	Dasypus_novemcinctus
ENSELUG00000002333	patz1	100	60.139	ENSDORG00000023834	Patz1	99	62.075	Dipodomys_ordii
ENSELUG00000002333	patz1	100	58.023	ENSECAG00000025030	PATZ1	99	61.887	Equus_caballus
ENSELUG00000002333	patz1	100	60.139	ENSFCAG00000030253	PATZ1	99	62.075	Felis_catus
ENSELUG00000002333	patz1	90	59.548	ENSFALG00000007450	PATZ1	100	59.548	Ficedula_albicollis
ENSELUG00000002333	patz1	97	57.092	ENSFDAG00000005614	PATZ1	100	51.667	Fukomys_damarensis
ENSELUG00000002333	patz1	100	73.016	ENSFHEG00000014755	patz1	100	73.810	Fundulus_heteroclitus
ENSELUG00000002333	patz1	100	60.948	ENSGMOG00000001062	patz1	100	61.367	Gadus_morhua
ENSELUG00000002333	patz1	100	58.108	ENSGALG00000006934	PATZ1	100	58.685	Gallus_gallus
ENSELUG00000002333	patz1	100	75.595	ENSGAFG00000010053	patz1	100	75.896	Gambusia_affinis
ENSELUG00000002333	patz1	90	60.625	ENSGAGG00000003214	PATZ1	99	59.821	Gopherus_agassizii
ENSELUG00000002333	patz1	100	58.166	ENSGGOG00000017171	PATZ1	99	61.887	Gorilla_gorilla
ENSELUG00000002333	patz1	100	73.146	ENSHCOG00000017644	patz1	93	73.146	Hippocampus_comes
ENSELUG00000002333	patz1	100	70.040	ENSIPUG00000017653	patz1	99	70.040	Ictalurus_punctatus
ENSELUG00000002333	patz1	100	58.166	ENSSTOG00000020707	PATZ1	99	62.075	Ictidomys_tridecemlineatus
ENSELUG00000002333	patz1	99	59.758	ENSJJAG00000015259	Patz1	99	60.172	Jaculus_jaculus
ENSELUG00000002333	patz1	100	67.500	ENSKMAG00000008157	patz1	98	74.865	Kryptolebias_marmoratus
ENSELUG00000002333	patz1	100	55.814	ENSLAFG00000002317	PATZ1	97	64.179	Loxodonta_africana
ENSELUG00000002333	patz1	100	58.166	ENSMFAG00000040968	PATZ1	99	61.815	Macaca_fascicularis
ENSELUG00000002333	patz1	100	58.166	ENSMNEG00000037588	PATZ1	99	61.815	Macaca_nemestrina
ENSELUG00000002333	patz1	100	58.166	ENSMLEG00000030938	PATZ1	99	61.626	Mandrillus_leucophaeus
ENSELUG00000002333	patz1	100	75.547	ENSMAMG00000023652	patz1	100	75.547	Mastacembelus_armatus
ENSELUG00000002333	patz1	90	55.809	ENSMGAG00000008439	PATZ1	100	55.809	Meleagris_gallopavo
ENSELUG00000002333	patz1	100	58.120	ENSMAUG00000004129	Patz1	99	61.437	Mesocricetus_auratus
ENSELUG00000002333	patz1	100	60.139	ENSMICG00000005430	PATZ1	99	61.887	Microcebus_murinus
ENSELUG00000002333	patz1	100	58.120	ENSMOCG00000014488	Patz1	99	61.437	Microtus_ochrogaster
ENSELUG00000002333	patz1	100	66.459	ENSMMOG00000021679	patz1	100	66.459	Mola_mola
ENSELUG00000002333	patz1	100	74.257	ENSMALG00000021172	patz1	100	74.257	Monopterus_albus
ENSELUG00000002333	patz1	100	57.835	MGP_CAROLIEiJ_G0016007	Patz1	99	61.509	Mus_caroli
ENSELUG00000002333	patz1	100	57.977	ENSMUSG00000020453	Patz1	99	61.509	Mus_musculus
ENSELUG00000002333	patz1	100	57.977	MGP_PahariEiJ_G0016884	Patz1	99	61.509	Mus_pahari
ENSELUG00000002333	patz1	100	57.977	MGP_SPRETEiJ_G0016846	Patz1	99	61.509	Mus_spretus
ENSELUG00000002333	patz1	100	60.208	ENSMLUG00000009942	PATZ1	99	61.815	Myotis_lucifugus
ENSELUG00000002333	patz1	100	58.120	ENSNGAG00000010268	Patz1	99	62.075	Nannospalax_galili
ENSELUG00000002333	patz1	100	74.449	ENSNBRG00000016032	patz1	100	68.953	Neolamprologus_brichardi
ENSELUG00000002333	patz1	65	59.773	ENSMEUG00000016293	PATZ1	100	59.773	Notamacropus_eugenii
ENSELUG00000002333	patz1	100	59.863	ENSODEG00000003589	PATZ1	99	62.075	Octodon_degus
ENSELUG00000002333	patz1	100	76.634	ENSONIG00000004248	patz1	100	76.634	Oreochromis_niloticus
ENSELUG00000002333	patz1	100	59.278	ENSOANG00000014654	PATZ1	100	59.966	Ornithorhynchus_anatinus
ENSELUG00000002333	patz1	100	72.510	ENSORLG00020010937	patz1	100	72.510	Oryzias_latipes_hni
ENSELUG00000002333	patz1	100	72.709	ENSORLG00015007396	patz1	100	72.709	Oryzias_latipes_hsok
ENSELUG00000002333	patz1	100	73.705	ENSOMEG00000006636	patz1	100	73.705	Oryzias_melastigma
ENSELUG00000002333	patz1	100	60.139	ENSOGAG00000027905	PATZ1	100	60.309	Otolemur_garnettii
ENSELUG00000002333	patz1	100	58.166	ENSPPAG00000033227	PATZ1	99	61.887	Pan_paniscus
ENSELUG00000002333	patz1	100	60.139	ENSPPRG00000001573	PATZ1	99	62.075	Panthera_pardus
ENSELUG00000002333	patz1	83	60.797	ENSPTIG00000007937	PATZ1	91	60.825	Panthera_tigris_altaica
ENSELUG00000002333	patz1	100	58.166	ENSPTRG00000014268	PATZ1	99	61.887	Pan_troglodytes
ENSELUG00000002333	patz1	100	58.166	ENSPANG00000006821	PATZ1	98	61.626	Papio_anubis
ENSELUG00000002333	patz1	100	73.930	ENSPKIG00000019584	patz1	100	74.125	Paramormyrops_kingsleyae
ENSELUG00000002333	patz1	56	57.841	ENSPSIG00000016553	-	91	55.856	Pelodiscus_sinensis
ENSELUG00000002333	patz1	72	74.222	ENSPSIG00000011562	-	100	74.222	Pelodiscus_sinensis
ENSELUG00000002333	patz1	100	66.335	ENSPMGG00000010196	patz1	99	72.000	Periophthalmus_magnuspinnatus
ENSELUG00000002333	patz1	100	58.262	ENSPEMG00000005321	Patz1	99	61.626	Peromyscus_maniculatus_bairdii
ENSELUG00000002333	patz1	100	75.992	ENSPLAG00000010425	patz1	100	76.295	Poecilia_latipinna
ENSELUG00000002333	patz1	100	75.992	ENSPMEG00000000255	patz1	100	76.295	Poecilia_mexicana
ENSELUG00000002333	patz1	100	67.917	ENSPREG00000002440	patz1	98	76.482	Poecilia_reticulata
ENSELUG00000002333	patz1	100	54.730	ENSPPYG00000011732	PATZ1	97	62.727	Pongo_abelii
ENSELUG00000002333	patz1	100	60.139	ENSPCOG00000019729	PATZ1	99	61.887	Propithecus_coquereli
ENSELUG00000002333	patz1	100	60.139	ENSPVAG00000001749	PATZ1	100	60.481	Pteropus_vampyrus
ENSELUG00000002333	patz1	100	77.030	ENSPNYG00000013542	patz1	100	77.030	Pundamilia_nyererei
ENSELUG00000002333	patz1	90	65.762	ENSPNAG00000017222	patz1	100	59.133	Pygocentrus_nattereri
ENSELUG00000002333	patz1	100	58.166	ENSRBIG00000044231	PATZ1	99	61.626	Rhinopithecus_bieti
ENSELUG00000002333	patz1	100	58.166	ENSRROG00000037155	PATZ1	99	61.626	Rhinopithecus_roxellana
ENSELUG00000002333	patz1	100	58.166	ENSSBOG00000003894	PATZ1	99	61.887	Saimiri_boliviensis_boliviensis
ENSELUG00000002333	patz1	82	96.795	ENSSFOG00015013244	patz1	78	96.795	Scleropages_formosus
ENSELUG00000002333	patz1	99	58.752	ENSSPUG00000015298	PATZ1	97	59.099	Sphenodon_punctatus
ENSELUG00000002333	patz1	88	58.010	ENSSSCG00000010027	PATZ1	99	62.972	Sus_scrofa
ENSELUG00000002333	patz1	100	67.222	ENSTRUG00000015366	patz1	100	67.222	Takifugu_rubripes
ENSELUG00000002333	patz1	100	59.965	ENSTTRG00000010279	PATZ1	100	60.309	Tursiops_truncatus
ENSELUG00000002333	patz1	100	58.166	ENSUAMG00000015014	PATZ1	99	62.075	Ursus_americanus
ENSELUG00000002333	patz1	100	54.149	ENSXETG00000004190	patz1	100	60.073	Xenopus_tropicalis
ENSELUG00000002333	patz1	100	75.595	ENSXMAG00000015531	patz1	100	75.896	Xiphophorus_maculatus