EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000002529 (Gene tree)
Gene ID: 105026468
Gene Symbol: stau1
Alias: fi67e05|wu:fi67e05|zgc:77271
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 9453 bases
Position: chrLG17:11783028-11792480
Accession: 105026468
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000000984	dsrm	PF00035.26	2.5e-42	1	4
ENSELUP00000000984	dsrm	PF00035.26	2.5e-42	2	4
ENSELUP00000000984	dsrm	PF00035.26	2.5e-42	3	4
ENSELUP00000000984	dsrm	PF00035.26	2.5e-42	4	4
ENSELUP00000000974	dsrm	PF00035.26	3.8e-42	1	4
ENSELUP00000000974	dsrm	PF00035.26	3.8e-42	2	4
ENSELUP00000000974	dsrm	PF00035.26	3.8e-42	3	4
ENSELUP00000000974	dsrm	PF00035.26	3.8e-42	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000018157	-	4593	XM_010897943	ENSELUP00000000974	705 (aa)	XP_010896245	UPI000577907C
ENSELUT00000018151	-	4675	-	ENSELUP00000000984	646 (aa)	-	-

Gene Model

Click here to download ENSELUG00000002529's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000002529's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000002529	stau1	90	48.185	ENSELUG00000006988	stau2	94	47.107

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000002529	stau1	93	70.696	ENSG00000124214	STAU1	99	73.084	Homo_sapiens
ENSELUG00000002529	stau1	99	84.844	ENSAPOG00000017260	stau1	99	83.523	Acanthochromis_polyacanthus
ENSELUG00000002529	stau1	94	73.366	ENSAMEG00000013681	STAU1	91	71.581	Ailuropoda_melanoleuca
ENSELUG00000002529	stau1	99	82.812	ENSACIG00000015918	stau1	99	82.670	Amphilophus_citrinellus
ENSELUG00000002529	stau1	99	85.469	ENSAOCG00000012224	stau1	99	83.949	Amphiprion_ocellaris
ENSELUG00000002529	stau1	99	85.469	ENSAPEG00000012308	stau1	99	83.949	Amphiprion_percula
ENSELUG00000002529	stau1	99	84.292	ENSATEG00000024600	stau1	99	83.728	Anabas_testudineus
ENSELUG00000002529	stau1	99	73.756	ENSAPLG00000010527	STAU1	99	70.436	Anas_platyrhynchos
ENSELUG00000002529	stau1	99	73.765	ENSACAG00000015909	STAU1	99	70.752	Anolis_carolinensis
ENSELUG00000002529	stau1	93	69.565	ENSANAG00000032714	STAU1	99	68.164	Aotus_nancymaae
ENSELUG00000002529	stau1	99	84.292	ENSACLG00000012270	stau1	99	82.768	Astatotilapia_calliptera
ENSELUG00000002529	stau1	91	82.171	ENSAMXG00000016812	stau1	98	82.171	Astyanax_mexicanus
ENSELUG00000002529	stau1	93	70.513	ENSBTAG00000000241	STAU1	95	72.797	Bos_taurus
ENSELUG00000002529	stau1	93	70.330	ENSCJAG00000016233	STAU1	95	72.605	Callithrix_jacchus
ENSELUG00000002529	stau1	94	72.071	ENSCAFG00000011347	STAU1	96	70.315	Canis_familiaris
ENSELUG00000002529	stau1	94	72.071	ENSCAFG00020017123	STAU1	99	72.142	Canis_lupus_dingo
ENSELUG00000002529	stau1	93	69.780	ENSCHIG00000001799	-	95	70.787	Capra_hircus
ENSELUG00000002529	stau1	93	70.240	ENSTSYG00000036179	-	95	70.522	Carlito_syrichta
ENSELUG00000002529	stau1	78	71.316	ENSCAPG00000017041	STAU1	99	70.138	Cavia_aperea
ENSELUG00000002529	stau1	77	69.428	ENSCPOG00000005566	STAU1	99	69.428	Cavia_porcellus
ENSELUG00000002529	stau1	93	69.565	ENSCCAG00000034339	STAU1	95	71.780	Cebus_capucinus
ENSELUG00000002529	stau1	93	73.840	ENSCATG00000028474	STAU1	99	72.039	Cercocebus_atys
ENSELUG00000002529	stau1	77	72.441	ENSCLAG00000006516	-	99	72.441	Chinchilla_lanigera
ENSELUG00000002529	stau1	78	59.010	ENSCLAG00000002784	-	99	59.010	Chinchilla_lanigera
ENSELUG00000002529	stau1	78	73.084	ENSCSAG00000014986	STAU1	99	73.084	Chlorocebus_sabaeus
ENSELUG00000002529	stau1	93	70.932	ENSCHOG00000001511	STAU1	95	71.161	Choloepus_hoffmanni
ENSELUG00000002529	stau1	99	75.463	ENSCPBG00000026741	STAU1	100	72.462	Chrysemys_picta_bellii
ENSELUG00000002529	stau1	93	70.879	ENSCANG00000039220	STAU1	95	73.180	Colobus_angolensis_palliatus
ENSELUG00000002529	stau1	77	68.898	ENSCGRG00001013453	Stau1	99	68.898	Cricetulus_griseus_chok1gshd
ENSELUG00000002529	stau1	77	68.898	ENSCGRG00000007216	Stau1	99	68.898	Cricetulus_griseus_crigri
ENSELUG00000002529	stau1	99	72.657	ENSCSEG00000000792	stau1	99	72.639	Cynoglossus_semilaevis
ENSELUG00000002529	stau1	92	77.864	ENSCVAG00000005906	stau1	99	79.223	Cyprinodon_variegatus
ENSELUG00000002529	stau1	99	82.215	ENSDARG00000044182	stau1	100	80.710	Danio_rerio
ENSELUG00000002529	stau1	93	71.115	ENSDNOG00000014933	STAU1	93	71.348	Dasypus_novemcinctus
ENSELUG00000002529	stau1	77	71.116	ENSDORG00000030220	Stau1	99	71.116	Dipodomys_ordii
ENSELUG00000002529	stau1	73	74.837	ENSETEG00000018235	STAU1	78	74.837	Echinops_telfairi
ENSELUG00000002529	stau1	94	72.654	ENSEASG00005023343	STAU1	96	70.783	Equus_asinus_asinus
ENSELUG00000002529	stau1	94	73.214	ENSECAG00000012894	STAU1	98	70.798	Equus_caballus
ENSELUG00000002529	stau1	62	77.000	ENSEEUG00000014344	STAU1	68	77.000	Erinaceus_europaeus
ENSELUG00000002529	stau1	94	72.303	ENSFCAG00000001447	STAU1	95	71.910	Felis_catus
ENSELUG00000002529	stau1	99	74.611	ENSFALG00000012940	STAU1	100	71.669	Ficedula_albicollis
ENSELUG00000002529	stau1	78	56.693	ENSFDAG00000020837	-	99	56.496	Fukomys_damarensis
ENSELUG00000002529	stau1	77	72.047	ENSFDAG00000014119	-	99	72.047	Fukomys_damarensis
ENSELUG00000002529	stau1	99	81.931	ENSFHEG00000013517	stau1	99	80.878	Fundulus_heteroclitus
ENSELUG00000002529	stau1	99	71.516	ENSGMOG00000016850	stau1	99	70.417	Gadus_morhua
ENSELUG00000002529	stau1	99	76.012	ENSGALG00000004736	STAU1	100	72.651	Gallus_gallus
ENSELUG00000002529	stau1	99	82.426	ENSGAFG00000010437	stau1	99	81.020	Gambusia_affinis
ENSELUG00000002529	stau1	99	84.555	ENSGACG00000001352	stau1	99	82.411	Gasterosteus_aculeatus
ENSELUG00000002529	stau1	99	76.324	ENSGAGG00000009825	STAU1	100	73.212	Gopherus_agassizii
ENSELUG00000002529	stau1	93	65.461	ENSGGOG00000025351	STAU1	99	75.946	Gorilla_gorilla
ENSELUG00000002529	stau1	99	84.448	ENSHBUG00000023668	stau1	99	82.910	Haplochromis_burtoni
ENSELUG00000002529	stau1	77	73.108	ENSHGLG00000008730	STAU1	99	73.108	Heterocephalus_glaber_female
ENSELUG00000002529	stau1	77	73.108	ENSHGLG00100000098	STAU1	99	73.108	Heterocephalus_glaber_male
ENSELUG00000002529	stau1	99	78.660	ENSHCOG00000018461	stau1	99	76.695	Hippocampus_comes
ENSELUG00000002529	stau1	99	78.527	ENSIPUG00000023725	stau1	99	77.098	Ictalurus_punctatus
ENSELUG00000002529	stau1	77	72.709	ENSSTOG00000003634	STAU1	99	72.709	Ictidomys_tridecemlineatus
ENSELUG00000002529	stau1	77	71.315	ENSJJAG00000020032	Stau1	99	71.514	Jaculus_jaculus
ENSELUG00000002529	stau1	99	80.967	ENSKMAG00000007135	stau1	99	79.972	Kryptolebias_marmoratus
ENSELUG00000002529	stau1	99	83.594	ENSLBEG00000020172	stau1	99	82.102	Labrus_bergylta
ENSELUG00000002529	stau1	97	75.430	ENSLACG00000016157	STAU1	93	74.156	Latimeria_chalumnae
ENSELUG00000002529	stau1	99	79.875	ENSLOCG00000003134	stau1	99	77.840	Lepisosteus_oculatus
ENSELUG00000002529	stau1	80	73.563	ENSLAFG00000003238	STAU1	99	73.563	Loxodonta_africana
ENSELUG00000002529	stau1	93	73.840	ENSMFAG00000040931	STAU1	99	75.547	Macaca_fascicularis
ENSELUG00000002529	stau1	93	65.580	ENSMMUG00000002302	STAU1	99	75.547	Macaca_mulatta
ENSELUG00000002529	stau1	93	72.917	ENSMNEG00000033821	STAU1	99	72.039	Macaca_nemestrina
ENSELUG00000002529	stau1	93	70.513	ENSMLEG00000031383	STAU1	95	72.797	Mandrillus_leucophaeus
ENSELUG00000002529	stau1	99	85.781	ENSMAMG00000017586	stau1	99	84.993	Mastacembelus_armatus
ENSELUG00000002529	stau1	99	84.424	ENSMZEG00005015605	stau1	99	82.885	Maylandia_zebra
ENSELUG00000002529	stau1	99	73.605	ENSMGAG00000004719	STAU1	99	70.572	Meleagris_gallopavo
ENSELUG00000002529	stau1	77	68.898	ENSMAUG00000013846	Stau1	99	68.898	Mesocricetus_auratus
ENSELUG00000002529	stau1	93	68.841	ENSMICG00000001995	STAU1	95	69.815	Microcebus_murinus
ENSELUG00000002529	stau1	77	69.685	ENSMOCG00000018743	Stau1	99	69.685	Microtus_ochrogaster
ENSELUG00000002529	stau1	99	81.406	ENSMMOG00000015455	stau1	99	79.972	Mola_mola
ENSELUG00000002529	stau1	94	75.162	ENSMODG00000016276	STAU1	99	71.283	Monodelphis_domestica
ENSELUG00000002529	stau1	99	85.312	ENSMALG00000000045	stau1	99	83.949	Monopterus_albus
ENSELUG00000002529	stau1	77	69.739	MGP_CAROLIEiJ_G0024699	Stau1	100	69.739	Mus_caroli
ENSELUG00000002529	stau1	77	70.341	ENSMUSG00000039536	Stau1	100	70.341	Mus_musculus
ENSELUG00000002529	stau1	77	69.522	MGP_PahariEiJ_G0026141	Stau1	99	69.522	Mus_pahari
ENSELUG00000002529	stau1	77	70.600	MGP_SPRETEiJ_G0025619	Stau1	100	70.600	Mus_spretus
ENSELUG00000002529	stau1	94	72.876	ENSMPUG00000017581	STAU1	95	71.125	Mustela_putorius_furo
ENSELUG00000002529	stau1	93	70.599	ENSMLUG00000008407	STAU1	93	70.599	Myotis_lucifugus
ENSELUG00000002529	stau1	77	70.866	ENSNGAG00000007108	Stau1	99	70.866	Nannospalax_galili
ENSELUG00000002529	stau1	99	84.292	ENSNBRG00000017596	stau1	99	82.768	Neolamprologus_brichardi
ENSELUG00000002529	stau1	93	70.330	ENSNLEG00000006955	STAU1	99	71.845	Nomascus_leucogenys
ENSELUG00000002529	stau1	72	77.021	ENSMEUG00000003263	STAU1	80	77.021	Notamacropus_eugenii
ENSELUG00000002529	stau1	80	71.209	ENSOPRG00000014569	STAU1	89	71.209	Ochotona_princeps
ENSELUG00000002529	stau1	78	72.495	ENSODEG00000006523	STAU1	99	71.513	Octodon_degus
ENSELUG00000002529	stau1	99	81.997	ENSONIG00000004152	stau1	98	80.716	Oreochromis_niloticus
ENSELUG00000002529	stau1	99	72.685	ENSOANG00000006394	STAU1	99	69.382	Ornithorhynchus_anatinus
ENSELUG00000002529	stau1	93	69.470	ENSOCUG00000006214	STAU1	95	70.599	Oryctolagus_cuniculus
ENSELUG00000002529	stau1	99	81.034	ENSOMEG00000002388	stau1	99	79.772	Oryzias_melastigma
ENSELUG00000002529	stau1	93	70.686	ENSOGAG00000002127	STAU1	93	70.974	Otolemur_garnettii
ENSELUG00000002529	stau1	78	50.296	ENSOGAG00000028222	-	99	50.000	Otolemur_garnettii
ENSELUG00000002529	stau1	94	72.358	ENSOARG00000012204	STAU1	96	70.393	Ovis_aries
ENSELUG00000002529	stau1	93	65.461	ENSPPAG00000032023	STAU1	99	75.946	Pan_paniscus
ENSELUG00000002529	stau1	93	71.910	ENSPPRG00000003436	STAU1	99	73.084	Panthera_pardus
ENSELUG00000002529	stau1	93	71.910	ENSPTIG00000011768	STAU1	99	72.374	Panthera_tigris_altaica
ENSELUG00000002529	stau1	93	65.461	ENSPTRG00000023130	STAU1	99	75.946	Pan_troglodytes
ENSELUG00000002529	stau1	93	73.840	ENSPANG00000020560	STAU1	95	73.840	Papio_anubis
ENSELUG00000002529	stau1	99	81.988	ENSPKIG00000024588	stau1	97	82.344	Paramormyrops_kingsleyae
ENSELUG00000002529	stau1	99	76.168	ENSPSIG00000010731	STAU1	99	72.931	Pelodiscus_sinensis
ENSELUG00000002529	stau1	99	78.571	ENSPMGG00000018553	stau1	100	78.261	Periophthalmus_magnuspinnatus
ENSELUG00000002529	stau1	77	69.882	ENSPEMG00000022045	Stau1	99	69.882	Peromyscus_maniculatus_bairdii
ENSELUG00000002529	stau1	94	75.530	ENSPCIG00000023269	STAU1	99	72.206	Phascolarctos_cinereus
ENSELUG00000002529	stau1	99	81.832	ENSPFOG00000017253	stau1	99	80.622	Poecilia_formosa
ENSELUG00000002529	stau1	66	76.168	ENSPLAG00000014829	stau1	96	76.531	Poecilia_latipinna
ENSELUG00000002529	stau1	99	77.950	ENSPMEG00000007495	stau1	99	77.086	Poecilia_mexicana
ENSELUG00000002529	stau1	99	81.677	ENSPREG00000003477	stau1	99	80.481	Poecilia_reticulata
ENSELUG00000002529	stau1	93	70.255	ENSPPYG00000011111	STAU1	95	72.519	Pongo_abelii
ENSELUG00000002529	stau1	79	64.591	ENSPCAG00000002459	STAU1	90	65.538	Procavia_capensis
ENSELUG00000002529	stau1	93	69.597	ENSPCOG00000027746	STAU1	99	71.068	Propithecus_coquereli
ENSELUG00000002529	stau1	72	76.471	ENSPVAG00000015019	STAU1	77	76.471	Pteropus_vampyrus
ENSELUG00000002529	stau1	99	84.448	ENSPNYG00000014436	stau1	99	82.910	Pundamilia_nyererei
ENSELUG00000002529	stau1	99	81.279	ENSPNAG00000011323	stau1	99	79.858	Pygocentrus_nattereri
ENSELUG00000002529	stau1	77	69.094	ENSRNOG00000007781	Stau1	99	69.094	Rattus_norvegicus
ENSELUG00000002529	stau1	78	72.353	ENSRBIG00000037345	STAU1	99	72.039	Rhinopithecus_bieti
ENSELUG00000002529	stau1	93	72.917	ENSRROG00000039008	STAU1	99	70.898	Rhinopithecus_roxellana
ENSELUG00000002529	stau1	93	69.565	ENSSBOG00000034448	STAU1	99	70.392	Saimiri_boliviensis_boliviensis
ENSELUG00000002529	stau1	94	75.325	ENSSHAG00000009492	STAU1	97	74.904	Sarcophilus_harrisii
ENSELUG00000002529	stau1	99	83.489	ENSSFOG00015021497	stau1	99	82.178	Scleropages_formosus
ENSELUG00000002529	stau1	99	84.219	ENSSMAG00000017410	stau1	99	82.955	Scophthalmus_maximus
ENSELUG00000002529	stau1	99	85.938	ENSSDUG00000019439	stau1	99	84.517	Seriola_dumerili
ENSELUG00000002529	stau1	99	86.094	ENSSLDG00000025040	stau1	99	84.659	Seriola_lalandi_dorsalis
ENSELUG00000002529	stau1	50	74.031	ENSSARG00000010389	-	51	74.031	Sorex_araneus
ENSELUG00000002529	stau1	99	75.617	ENSSPUG00000017983	STAU1	99	73.071	Sphenodon_punctatus
ENSELUG00000002529	stau1	99	85.781	ENSSPAG00000019275	stau1	99	84.233	Stegastes_partitus
ENSELUG00000002529	stau1	94	73.127	ENSSSCG00000027444	STAU1	99	73.127	Sus_scrofa
ENSELUG00000002529	stau1	99	72.222	ENSTGUG00000008784	STAU1	100	69.335	Taeniopygia_guttata
ENSELUG00000002529	stau1	99	80.871	ENSTRUG00000005837	stau1	99	79.944	Takifugu_rubripes
ENSELUG00000002529	stau1	99	79.439	ENSTNIG00000014732	stau1	99	78.603	Tetraodon_nigroviridis
ENSELUG00000002529	stau1	96	59.450	ENSTBEG00000009404	STAU1	99	60.413	Tupaia_belangeri
ENSELUG00000002529	stau1	72	72.340	ENSTTRG00000004285	STAU1	80	72.340	Tursiops_truncatus
ENSELUG00000002529	stau1	78	72.287	ENSUAMG00000025449	STAU1	99	72.287	Ursus_americanus
ENSELUG00000002529	stau1	59	69.054	ENSUMAG00000024475	STAU1	89	69.054	Ursus_maritimus
ENSELUG00000002529	stau1	93	70.696	ENSVPAG00000001313	STAU1	95	72.989	Vicugna_pacos
ENSELUG00000002529	stau1	94	72.071	ENSVVUG00000022325	STAU1	96	70.315	Vulpes_vulpes
ENSELUG00000002529	stau1	99	71.295	ENSXETG00000001783	stau1	95	70.692	Xenopus_tropicalis
ENSELUG00000002529	stau1	58	78.249	ENSXCOG00000008804	stau1	94	78.249	Xiphophorus_couchianus
ENSELUG00000002529	stau1	99	81.931	ENSXMAG00000016175	stau1	99	80.453	Xiphophorus_maculatus