EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSELUG00000002779 (Gene tree)
Gene ID
105015780
Gene Symbol
SCAF8
Alias
KIAA1116|RBM16
Full Name
SR-related CTD associated factor 8
Gene Type
protein_coding
Species
Esox_lucius
Status
putative
Strand
Plus strand
Length
28492 bases
Position
chrLG15:21115008-21143499
Accession
105015780
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSELUP00000026769RRM_1PF00076.221.4e-0811
ENSELUP00000026777RRM_1PF00076.224.6e-0811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSELUT00000017659SCAF8-2014686XM_010879185ENSELUP000000267771485 (aa)XP_010877487UPI000576EF13
ENSELUT00000017673SCAF8-2022088-ENSELUP00000026769695 (aa)--
Gene Model
Click here to download ENSELUG00000002779's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000002779's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSELUG00000002779SCAF86168.116ENSG00000156304SCAF45852.703Homo_sapiens
ENSELUG00000002779SCAF87564.988ENSG00000213079SCAF88865.000Homo_sapiens
ENSELUG00000002779SCAF810063.151ENSAPOG00000015527SCAF87571.813Acanthochromis_polyacanthus
ENSELUG00000002779SCAF87367.632ENSAMEG00000007583SCAF87968.222Ailuropoda_melanoleuca
ENSELUG00000002779SCAF87848.163ENSAOCG00000010433scaf4b6251.471Amphiprion_ocellaris
ENSELUG00000002779SCAF810062.943ENSAOCG00000002421SCAF87571.903Amphiprion_ocellaris
ENSELUG00000002779SCAF87848.163ENSAPEG00000010913scaf4b6251.471Amphiprion_percula
ENSELUG00000002779SCAF87569.211ENSATEG00000006959SCAF89369.452Anabas_testudineus
ENSELUG00000002779SCAF86975.072ENSAPLG00000005765SCAF88071.429Anas_platyrhynchos
ENSELUG00000002779SCAF86869.343ENSAPLG00000002509SCAF45052.117Anas_platyrhynchos
ENSELUG00000002779SCAF87564.754ENSANAG00000036184SCAF88864.767Aotus_nancymaae
ENSELUG00000002779SCAF86168.116ENSANAG00000037494SCAF45852.703Aotus_nancymaae
ENSELUG00000002779SCAF87552.101ENSAMXG00000008585scaf4a5052.282Astyanax_mexicanus
ENSELUG00000002779SCAF86168.841ENSBTAG00000018855SCAF45853.242Bos_taurus
ENSELUG00000002779SCAF87567.275ENSBTAG00000031917SCAF88667.966Bos_taurus
ENSELUG00000002779SCAF86168.116ENSCJAG00000008993SCAF46552.703Callithrix_jacchus
ENSELUG00000002779SCAF87564.754ENSCJAG00000012631SCAF88563.224Callithrix_jacchus
ENSELUG00000002779SCAF87565.812ENSCAFG00000000570SCAF88466.382Canis_familiaris
ENSELUG00000002779SCAF86768.841ENSCAFG00000008863SCAF45952.083Canis_familiaris
ENSELUG00000002779SCAF86668.841ENSCAFG00020026019SCAF46262.304Canis_lupus_dingo
ENSELUG00000002779SCAF87565.812ENSCAFG00020015048SCAF88366.382Canis_lupus_dingo
ENSELUG00000002779SCAF86168.841ENSCHIG00000008385SCAF45852.921Capra_hircus
ENSELUG00000002779SCAF87567.357ENSCHIG00000025041SCAF88668.088Capra_hircus
ENSELUG00000002779SCAF87565.745ENSTSYG00000010991SCAF88664.535Carlito_syrichta
ENSELUG00000002779SCAF87073.239ENSCAPG00000003300SCAF87169.231Cavia_aperea
ENSELUG00000002779SCAF89361.876ENSCPOG00000030311-5454.420Cavia_porcellus
ENSELUG00000002779SCAF86168.841ENSCPOG00000012443SCAF45752.667Cavia_porcellus
ENSELUG00000002779SCAF87547.270ENSCPOG00000022216-8656.189Cavia_porcellus
ENSELUG00000002779SCAF87564.871ENSCCAG00000024952SCAF88864.884Cebus_capucinus
ENSELUG00000002779SCAF86168.116ENSCCAG00000033727SCAF45953.041Cebus_capucinus
ENSELUG00000002779SCAF87565.105ENSCATG00000035361SCAF88865.116Cercocebus_atys
ENSELUG00000002779SCAF86168.116ENSCATG00000030379SCAF45852.703Cercocebus_atys
ENSELUG00000002779SCAF85968.841ENSCLAG00000006298SCAF45751.930Chinchilla_lanigera
ENSELUG00000002779SCAF87368.305ENSCLAG00000004910SCAF88269.423Chinchilla_lanigera
ENSELUG00000002779SCAF86168.116ENSCSAG00000009438SCAF45852.365Chlorocebus_sabaeus
ENSELUG00000002779SCAF87563.543ENSCSAG00000013430SCAF88863.564Chlorocebus_sabaeus
ENSELUG00000002779SCAF87568.826ENSCPBG00000016330SCAF87968.911Chrysemys_picta_bellii
ENSELUG00000002779SCAF86168.116ENSCANG00000029847SCAF45852.703Colobus_angolensis_palliatus
ENSELUG00000002779SCAF87565.340ENSCANG00000039499SCAF88865.176Colobus_angolensis_palliatus
ENSELUG00000002779SCAF87370.116ENSCGRG00001020167Scaf88270.855Cricetulus_griseus_chok1gshd
ENSELUG00000002779SCAF85968.116ENSCGRG00001020821Scaf45451.971Cricetulus_griseus_chok1gshd
ENSELUG00000002779SCAF85968.116ENSCGRG00000014360Scaf45452.015Cricetulus_griseus_crigri
ENSELUG00000002779SCAF87269.856ENSCGRG00000004120Scaf88170.642Cricetulus_griseus_crigri
ENSELUG00000002779SCAF86558.667ENSCSEG00000012808-5160.309Cynoglossus_semilaevis
ENSELUG00000002779SCAF810061.980ENSCSEG00000000043-7671.454Cynoglossus_semilaevis
ENSELUG00000002779SCAF89857.411ENSCVAG00000000925SCAF87567.996Cyprinodon_variegatus
ENSELUG00000002779SCAF87258.958ENSDNOG00000025271SCAF88564.885Dasypus_novemcinctus
ENSELUG00000002779SCAF86168.841ENSDNOG00000019014SCAF45542.506Dasypus_novemcinctus
ENSELUG00000002779SCAF87565.389ENSDORG00000006391Scaf88765.749Dipodomys_ordii
ENSELUG00000002779SCAF85871.795ENSETEG00000000583SCAF46139.225Echinops_telfairi
ENSELUG00000002779SCAF87565.389ENSEASG00005018879SCAF88865.738Equus_asinus_asinus
ENSELUG00000002779SCAF86168.841ENSEASG00005007756SCAF45952.862Equus_asinus_asinus
ENSELUG00000002779SCAF86168.841ENSECAG00000014248SCAF45952.862Equus_caballus
ENSELUG00000002779SCAF87565.574ENSECAG00000005540SCAF88866.042Equus_caballus
ENSELUG00000002779SCAF86168.841ENSFCAG00000002228SCAF45952.862Felis_catus
ENSELUG00000002779SCAF87566.271ENSFCAG00000023424SCAF88766.825Felis_catus
ENSELUG00000002779SCAF86974.212ENSFALG00000012433SCAF88467.927Ficedula_albicollis
ENSELUG00000002779SCAF85968.841ENSFDAG00000017780SCAF45750.526Fukomys_damarensis
ENSELUG00000002779SCAF87368.435ENSFDAG00000010335SCAF88269.041Fukomys_damarensis
ENSELUG00000002779SCAF87569.902ENSFHEG00000008284SCAF87569.601Fundulus_heteroclitus
ENSELUG00000002779SCAF86656.376ENSGMOG00000015188scaf4a5848.800Gadus_morhua
ENSELUG00000002779SCAF85385.067ENSGMOG00000018812SCAF88372.925Gadus_morhua
ENSELUG00000002779SCAF87271.149ENSGALG00000013635SCAF87970.795Gallus_gallus
ENSELUG00000002779SCAF86951.859ENSGAFG00000018033SCAF87670.769Gambusia_affinis
ENSELUG00000002779SCAF86260.870ENSGACG00000020580scaf4a5950.345Gasterosteus_aculeatus
ENSELUG00000002779SCAF87568.166ENSGACG00000006909SCAF89868.118Gasterosteus_aculeatus
ENSELUG00000002779SCAF87564.988ENSGGOG00000008645SCAF88865.000Gorilla_gorilla
ENSELUG00000002779SCAF810060.700ENSHBUG00000019537SCAF87872.137Haplochromis_burtoni
ENSELUG00000002779SCAF87369.032ENSHGLG00000003619SCAF88269.638Heterocephalus_glaber_female
ENSELUG00000002779SCAF86168.841ENSHGLG00000010582SCAF45853.000Heterocephalus_glaber_female
ENSELUG00000002779SCAF87268.889ENSHGLG00100004708SCAF88269.503Heterocephalus_glaber_male
ENSELUG00000002779SCAF85968.841ENSHGLG00100009441SCAF45852.281Heterocephalus_glaber_male
ENSELUG00000002779SCAF85063.576ENSHCOG00000006849scaf4a5775.182Hippocampus_comes
ENSELUG00000002779SCAF87565.505ENSSTOG00000026043SCAF88765.059Ictidomys_tridecemlineatus
ENSELUG00000002779SCAF85970.290ENSJJAG00000019447Scaf45850.178Jaculus_jaculus
ENSELUG00000002779SCAF87466.913ENSJJAG00000020480Scaf88567.528Jaculus_jaculus
ENSELUG00000002779SCAF810062.096ENSKMAG00000012767SCAF87671.093Kryptolebias_marmoratus
ENSELUG00000002779SCAF88384.815ENSLBEG00000012484-6285.417Labrus_bergylta
ENSELUG00000002779SCAF87748.276ENSLACG00000013913SCAF46046.953Latimeria_chalumnae
ENSELUG00000002779SCAF87662.542ENSLOCG00000016856SCAF89162.424Lepisosteus_oculatus
ENSELUG00000002779SCAF86068.841ENSLAFG00000010710SCAF45851.930Loxodonta_africana
ENSELUG00000002779SCAF87370.481ENSLAFG00000000022SCAF87871.001Loxodonta_africana
ENSELUG00000002779SCAF86168.116ENSMFAG00000037668SCAF45852.703Macaca_fascicularis
ENSELUG00000002779SCAF87565.105ENSMFAG00000032738SCAF88865.116Macaca_fascicularis
ENSELUG00000002779SCAF87565.105ENSMMUG00000015163SCAF88865.116Macaca_mulatta
ENSELUG00000002779SCAF86168.116ENSMMUG00000001712SCAF45852.703Macaca_mulatta
ENSELUG00000002779SCAF87565.105ENSMNEG00000043466SCAF88865.116Macaca_nemestrina
ENSELUG00000002779SCAF86168.116ENSMNEG00000032966SCAF45852.703Macaca_nemestrina
ENSELUG00000002779SCAF87564.810ENSMLEG00000034845SCAF88864.824Mandrillus_leucophaeus
ENSELUG00000002779SCAF85968.116ENSMLEG00000039674SCAF45852.098Mandrillus_leucophaeus
ENSELUG00000002779SCAF89759.537ENSMAMG00000009457SCAF87470.311Mastacembelus_armatus
ENSELUG00000002779SCAF810060.832ENSMZEG00005005698SCAF87872.317Maylandia_zebra
ENSELUG00000002779SCAF87370.581ENSMGAG00000012762SCAF88170.065Meleagris_gallopavo
ENSELUG00000002779SCAF87270.092ENSMAUG00000009513Scaf88270.883Mesocricetus_auratus
ENSELUG00000002779SCAF85968.116ENSMAUG00000013307Scaf45852.518Mesocricetus_auratus
ENSELUG00000002779SCAF87565.000ENSMICG00000028965SCAF88865.349Microcebus_murinus
ENSELUG00000002779SCAF86168.116ENSMICG00000005256SCAF45952.862Microcebus_murinus
ENSELUG00000002779SCAF86168.841ENSMOCG00000012087Scaf45553.633Microtus_ochrogaster
ENSELUG00000002779SCAF87370.116ENSMOCG00000014950Scaf88070.855Microtus_ochrogaster
ENSELUG00000002779SCAF87368.062ENSMMOG00000002216SCAF87568.715Mola_mola
ENSELUG00000002779SCAF87567.036ENSMODG00000008301SCAF88566.790Monodelphis_domestica
ENSELUG00000002779SCAF87568.018ENSMALG00000011584SCAF87773.129Monopterus_albus
ENSELUG00000002779SCAF87152.595ENSMALG00000013825scaf4a5453.287Monopterus_albus
ENSELUG00000002779SCAF86169.565MGP_CAROLIEiJ_G0020944Scaf45455.593Mus_caroli
ENSELUG00000002779SCAF89767.626MGP_CAROLIEiJ_G0021016Scaf88170.725Mus_caroli
ENSELUG00000002779SCAF89767.626ENSMUSG00000046201Scaf88170.855Mus_musculus
ENSELUG00000002779SCAF86169.565ENSMUSG00000022983Scaf45555.932Mus_musculus
ENSELUG00000002779SCAF87370.505MGP_PahariEiJ_G0023334Scaf88171.244Mus_pahari
ENSELUG00000002779SCAF86169.565MGP_PahariEiJ_G0016649Scaf45455.932Mus_pahari
ENSELUG00000002779SCAF86169.565MGP_SPRETEiJ_G0021850Scaf45555.932Mus_spretus
ENSELUG00000002779SCAF87563.963ENSMPUG00000001974SCAF88764.501Mustela_putorius_furo
ENSELUG00000002779SCAF86168.841ENSMPUG00000001078SCAF45852.218Mustela_putorius_furo
ENSELUG00000002779SCAF87565.595ENSMLUG00000029190SCAF88665.595Myotis_lucifugus
ENSELUG00000002779SCAF86163.380ENSMLUG00000011472SCAF45749.832Myotis_lucifugus
ENSELUG00000002779SCAF85169.571ENSNGAG00000012332Scaf86070.221Nannospalax_galili
ENSELUG00000002779SCAF85969.565ENSNGAG00000005214Scaf45061.809Nannospalax_galili
ENSELUG00000002779SCAF87764.885ENSNBRG00000009067SCAF89166.310Neolamprologus_brichardi
ENSELUG00000002779SCAF87563.477ENSNLEG00000015509SCAF88763.306Nomascus_leucogenys
ENSELUG00000002779SCAF86168.116ENSNLEG00000003569SCAF45852.703Nomascus_leucogenys
ENSELUG00000002779SCAF85975.258ENSOPRG00000018413-6875.258Ochotona_princeps
ENSELUG00000002779SCAF87565.217ENSODEG00000007296SCAF88665.700Octodon_degus
ENSELUG00000002779SCAF86068.841ENSODEG00000002718SCAF45650.347Octodon_degus
ENSELUG00000002779SCAF86463.871ENSONIG00000005610scaf4b5565.468Oreochromis_niloticus
ENSELUG00000002779SCAF87370.413ENSONIG00000008119SCAF89169.191Oreochromis_niloticus
ENSELUG00000002779SCAF86266.176ENSONIG00000004687scaf4a5353.398Oreochromis_niloticus
ENSELUG00000002779SCAF87069.565ENSOCUG00000008336SCAF45753.584Oryctolagus_cuniculus
ENSELUG00000002779SCAF87567.244ENSOCUG00000026063SCAF88567.946Oryctolagus_cuniculus
ENSELUG00000002779SCAF810060.091ENSORLG00000017358SCAF87670.117Oryzias_latipes
ENSELUG00000002779SCAF810060.026ENSORLG00020002214SCAF87670.297Oryzias_latipes_hni
ENSELUG00000002779SCAF89461.711ENSORLG00015015779SCAF87670.297Oryzias_latipes_hsok
ENSELUG00000002779SCAF810060.815ENSOMEG00000015471SCAF87670.387Oryzias_melastigma
ENSELUG00000002779SCAF87563.039ENSOGAG00000034223SCAF88563.492Otolemur_garnettii
ENSELUG00000002779SCAF85968.116ENSOGAG00000014653SCAF45445.238Otolemur_garnettii
ENSELUG00000002779SCAF85968.841ENSOARG00000013894SCAF45751.930Ovis_aries
ENSELUG00000002779SCAF87567.036ENSOARG00000004159SCAF88567.734Ovis_aries
ENSELUG00000002779SCAF86168.116ENSPPAG00000028535SCAF45852.703Pan_paniscus
ENSELUG00000002779SCAF87564.988ENSPPAG00000039826SCAF88865.000Pan_paniscus
ENSELUG00000002779SCAF85968.841ENSPPRG00000000635SCAF45852.265Panthera_pardus
ENSELUG00000002779SCAF87566.390ENSPPRG00000023175SCAF88766.944Panthera_pardus
ENSELUG00000002779SCAF87566.226ENSPTIG00000014836SCAF88666.787Panthera_tigris_altaica
ENSELUG00000002779SCAF87565.105ENSPTRG00000018727SCAF88865.116Pan_troglodytes
ENSELUG00000002779SCAF86168.116ENSPTRG00000013848SCAF45852.703Pan_troglodytes
ENSELUG00000002779SCAF87565.105ENSPANG00000017489SCAF88862.791Papio_anubis
ENSELUG00000002779SCAF86168.116ENSPANG00000017332SCAF45852.703Papio_anubis
ENSELUG00000002779SCAF88682.667ENSPKIG00000021212SCAF88870.241Paramormyrops_kingsleyae
ENSELUG00000002779SCAF88152.893ENSPKIG00000022408scaf4a7155.254Paramormyrops_kingsleyae
ENSELUG00000002779SCAF86664.837ENSPSIG00000008614SCAF86964.837Pelodiscus_sinensis
ENSELUG00000002779SCAF87269.594ENSPEMG00000010531Scaf87770.341Peromyscus_maniculatus_bairdii
ENSELUG00000002779SCAF87567.315ENSPCIG00000001141SCAF88567.193Phascolarctos_cinereus
ENSELUG00000002779SCAF810062.191ENSPFOG00000004176SCAF88477.792Poecilia_formosa
ENSELUG00000002779SCAF810062.057ENSPLAG00000021432SCAF87671.416Poecilia_latipinna
ENSELUG00000002779SCAF810062.057ENSPMEG00000007591SCAF88269.897Poecilia_mexicana
ENSELUG00000002779SCAF810061.857ENSPREG00000000652SCAF87671.053Poecilia_reticulata
ENSELUG00000002779SCAF87564.019ENSPPYG00000017121SCAF88863.573Pongo_abelii
ENSELUG00000002779SCAF86168.116ENSPPYG00000011355SCAF45852.703Pongo_abelii
ENSELUG00000002779SCAF86277.612ENSPCAG00000013044SCAF86977.944Procavia_capensis
ENSELUG00000002779SCAF86168.841ENSPCAG00000009998SCAF45950.993Procavia_capensis
ENSELUG00000002779SCAF86168.116ENSPCOG00000018710SCAF45852.862Propithecus_coquereli
ENSELUG00000002779SCAF87564.884ENSPCOG00000002067SCAF88765.059Propithecus_coquereli
ENSELUG00000002779SCAF87564.789ENSPVAG00000005582SCAF88965.574Pteropus_vampyrus
ENSELUG00000002779SCAF86969.565ENSPVAG00000005220SCAF46051.466Pteropus_vampyrus
ENSELUG00000002779SCAF88066.860ENSPNAG00000024740SCAF88070.394Pygocentrus_nattereri
ENSELUG00000002779SCAF87370.390ENSRNOG00000016919Scaf88270.725Rattus_norvegicus
ENSELUG00000002779SCAF87565.340ENSRBIG00000035769SCAF88865.349Rhinopithecus_bieti
ENSELUG00000002779SCAF86968.116ENSRROG00000029488SCAF45952.703Rhinopithecus_roxellana
ENSELUG00000002779SCAF87565.340ENSRROG00000013580SCAF88865.349Rhinopithecus_roxellana
ENSELUG00000002779SCAF87565.439ENSSBOG00000027023SCAF88865.000Saimiri_boliviensis_boliviensis
ENSELUG00000002779SCAF87566.667ENSSHAG00000009915SCAF88467.072Sarcophilus_harrisii
ENSELUG00000002779SCAF89774.564ENSSFOG00015009481SCAF88477.273Scleropages_formosus
ENSELUG00000002779SCAF89843.314ENSSMAG00000003738scaf4b5362.564Scophthalmus_maximus
ENSELUG00000002779SCAF87372.083ENSSMAG00000008275SCAF87572.237Scophthalmus_maximus
ENSELUG00000002779SCAF87949.378ENSSDUG00000012380scaf4b5161.735Seriola_dumerili
ENSELUG00000002779SCAF87949.378ENSSLDG00000023152-5161.735Seriola_lalandi_dorsalis
ENSELUG00000002779SCAF86167.391ENSSARG00000009994SCAF45951.485Sorex_araneus
ENSELUG00000002779SCAF87369.430ENSSPUG00000015219SCAF87870.000Sphenodon_punctatus
ENSELUG00000002779SCAF86168.841ENSSSCG00000021023SCAF45752.862Sus_scrofa
ENSELUG00000002779SCAF87564.855ENSSSCG00000004070SCAF88865.581Sus_scrofa
ENSELUG00000002779SCAF87568.030ENSTGUG00000011151SCAF88468.278Taeniopygia_guttata
ENSELUG00000002779SCAF810060.540ENSTRUG00000009243SCAF87671.107Takifugu_rubripes
ENSELUG00000002779SCAF86457.346ENSTRUG00000009536-6658.247Takifugu_rubripes
ENSELUG00000002779SCAF88547.440ENSTNIG00000009945scaf4a6153.448Tetraodon_nigroviridis
ENSELUG00000002779SCAF87567.042ENSTNIG00000016885SCAF89767.260Tetraodon_nigroviridis
ENSELUG00000002779SCAF87564.810ENSTTRG00000014538SCAF88864.824Tursiops_truncatus
ENSELUG00000002779SCAF86768.841ENSTTRG00000010963SCAF45852.778Tursiops_truncatus
ENSELUG00000002779SCAF87565.983ENSUAMG00000024736SCAF88666.382Ursus_americanus
ENSELUG00000002779SCAF86168.841ENSUAMG00000008860SCAF45852.862Ursus_americanus
ENSELUG00000002779SCAF87465.299ENSUMAG00000013404SCAF88665.881Ursus_maritimus
ENSELUG00000002779SCAF87972.821ENSVPAG00000012465SCAF88883.333Vicugna_pacos
ENSELUG00000002779SCAF86668.841ENSVVUG00000002953SCAF45852.128Vulpes_vulpes
ENSELUG00000002779SCAF87565.815ENSVVUG00000007532SCAF88565.881Vulpes_vulpes
ENSELUG00000002779SCAF89666.040ENSXETG00000013132scaf85865.909Xenopus_tropicalis
ENSELUG00000002779SCAF810061.340ENSXMAG00000019192SCAF87671.053Xiphophorus_maculatus

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