EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000003015 (Gene tree)
Gene ID: 105011770
Gene Symbol: gfi1ab
Alias: gfi1|gfi1.2|gfi1b
Full Name: zinc finger protein Gfi-1-like
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 5446 bases
Position: chrLG08:23789385-23794830
Accession: 105011770
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000001551	zf-C2H2	PF00096.26	2.4e-26	1	6
ENSELUP00000001551	zf-C2H2	PF00096.26	2.4e-26	2	6
ENSELUP00000001551	zf-C2H2	PF00096.26	2.4e-26	3	6
ENSELUP00000001551	zf-C2H2	PF00096.26	2.4e-26	4	6
ENSELUP00000001551	zf-C2H2	PF00096.26	2.4e-26	5	6
ENSELUP00000001551	zf-C2H2	PF00096.26	2.4e-26	6	6
ENSELUP00000001551	zf-met	PF12874.7	3.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000017199	-	2175	XM_010872085	ENSELUP00000001551	401 (aa)	XP_010870387	UPI000575E947

Gene Model

Click here to download ENSELUG00000003015's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000003015's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000003015	gfi1ab	99	64.428	ENSELUG00000019033	GFI1	100	64.677
ENSELUG00000003015	gfi1ab	54	41.176	ENSELUG00000017463	-	87	44.444
ENSELUG00000003015	gfi1ab	66	43.030	ENSELUG00000018970	-	81	43.030
ENSELUG00000003015	gfi1ab	52	39.759	ENSELUG00000022942	-	61	44.737
ENSELUG00000003015	gfi1ab	57	42.727	ENSELUG00000009575	-	99	42.963
ENSELUG00000003015	gfi1ab	55	43.151	ENSELUG00000018405	-	96	43.151
ENSELUG00000003015	gfi1ab	50	45.139	ENSELUG00000012597	-	98	45.139
ENSELUG00000003015	gfi1ab	57	46.914	ENSELUG00000004677	-	68	46.914
ENSELUG00000003015	gfi1ab	79	45.378	ENSELUG00000009654	-	78	45.390
ENSELUG00000003015	gfi1ab	57	38.922	ENSELUG00000020794	-	65	38.922
ENSELUG00000003015	gfi1ab	74	34.286	ENSELUG00000020479	znf384l	61	42.424
ENSELUG00000003015	gfi1ab	52	40.559	ENSELUG00000001909	-	76	40.741

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000003015	gfi1ab	99	63.109	ENSG00000162676	GFI1	100	63.341	Homo_sapiens
ENSELUG00000003015	gfi1ab	99	74.813	ENSAPOG00000015189	gfi1ab	100	74.813	Acanthochromis_polyacanthus
ENSELUG00000003015	gfi1ab	99	73.383	ENSACIG00000016354	gfi1ab	100	73.383	Amphilophus_citrinellus
ENSELUG00000003015	gfi1ab	99	66.000	ENSAOCG00000008339	gfi1ab	100	65.750	Amphiprion_ocellaris
ENSELUG00000003015	gfi1ab	99	75.062	ENSAPEG00000023870	gfi1ab	100	75.312	Amphiprion_percula
ENSELUG00000003015	gfi1ab	99	69.750	ENSATEG00000009167	gfi1ab	89	69.750	Anabas_testudineus
ENSELUG00000003015	gfi1ab	85	69.231	ENSAPLG00000015700	GFI1	99	69.231	Anas_platyrhynchos
ENSELUG00000003015	gfi1ab	99	66.344	ENSACAG00000004498	GFI1	100	66.828	Anolis_carolinensis
ENSELUG00000003015	gfi1ab	99	62.731	ENSANAG00000019656	GFI1	100	64.352	Aotus_nancymaae
ENSELUG00000003015	gfi1ab	99	74.938	ENSACLG00000026458	gfi1ab	93	74.938	Astatotilapia_calliptera
ENSELUG00000003015	gfi1ab	64	49.042	ENSAMXG00000015228	-	82	49.042	Astyanax_mexicanus
ENSELUG00000003015	gfi1ab	99	69.630	ENSAMXG00000039600	gfi1ab	100	69.630	Astyanax_mexicanus
ENSELUG00000003015	gfi1ab	99	54.020	ENSAMXG00000006669	GFI1	100	54.020	Astyanax_mexicanus
ENSELUG00000003015	gfi1ab	99	63.109	ENSBTAG00000016723	GFI1	100	63.341	Bos_taurus
ENSELUG00000003015	gfi1ab	99	62.181	ENSCJAG00000017609	GFI1	100	63.805	Callithrix_jacchus
ENSELUG00000003015	gfi1ab	99	63.573	ENSCAFG00000020155	GFI1	100	63.805	Canis_familiaris
ENSELUG00000003015	gfi1ab	99	63.573	ENSCAFG00020013371	GFI1	88	63.805	Canis_lupus_dingo
ENSELUG00000003015	gfi1ab	99	63.048	ENSCHIG00000016135	GFI1	100	63.510	Capra_hircus
ENSELUG00000003015	gfi1ab	99	64.037	ENSCPOG00000011727	GFI1	100	63.889	Cavia_porcellus
ENSELUG00000003015	gfi1ab	99	62.731	ENSCCAG00000036072	GFI1	100	64.120	Cebus_capucinus
ENSELUG00000003015	gfi1ab	99	63.109	ENSCATG00000037873	GFI1	100	63.341	Cercocebus_atys
ENSELUG00000003015	gfi1ab	95	85.185	ENSCLAG00000005915	GFI1	100	62.217	Chinchilla_lanigera
ENSELUG00000003015	gfi1ab	98	57.909	ENSCSAG00000001469	GFI1	100	58.177	Chlorocebus_sabaeus
ENSELUG00000003015	gfi1ab	99	63.109	ENSCANG00000034077	GFI1	100	63.341	Colobus_angolensis_palliatus
ENSELUG00000003015	gfi1ab	99	62.181	ENSCGRG00001015432	Gfi1	100	63.805	Cricetulus_griseus_chok1gshd
ENSELUG00000003015	gfi1ab	99	63.882	ENSCSEG00000017729	GFI1	100	64.128	Cynoglossus_semilaevis
ENSELUG00000003015	gfi1ab	99	61.220	ENSCVAG00000004930	GFI1	100	61.743	Cyprinodon_variegatus
ENSELUG00000003015	gfi1ab	99	71.287	ENSCVAG00000011828	gfi1ab	100	71.287	Cyprinodon_variegatus
ENSELUG00000003015	gfi1ab	99	74.938	ENSDARG00000044457	gfi1ab	100	75.186	Danio_rerio
ENSELUG00000003015	gfi1ab	99	63.972	ENSDNOG00000000782	GFI1	97	64.203	Dasypus_novemcinctus
ENSELUG00000003015	gfi1ab	51	72.115	ENSEBUG00000008075	gfi1ab	70	72.115	Eptatretus_burgeri
ENSELUG00000003015	gfi1ab	99	64.403	ENSEASG00005015509	GFI1	86	64.637	Equus_asinus_asinus
ENSELUG00000003015	gfi1ab	91	56.345	ENSECAG00000006647	GFI1	92	56.853	Equus_caballus
ENSELUG00000003015	gfi1ab	99	63.146	ENSEEUG00000000198	GFI1	100	63.615	Erinaceus_europaeus
ENSELUG00000003015	gfi1ab	99	63.805	ENSFCAG00000005914	GFI1	100	64.037	Felis_catus
ENSELUG00000003015	gfi1ab	99	71.642	ENSFHEG00000010997	gfi1ab	100	71.642	Fundulus_heteroclitus
ENSELUG00000003015	gfi1ab	99	59.518	ENSFHEG00000000341	GFI1	100	62.899	Fundulus_heteroclitus
ENSELUG00000003015	gfi1ab	99	72.319	ENSGMOG00000007737	gfi1ab	100	72.319	Gadus_morhua
ENSELUG00000003015	gfi1ab	99	67.961	ENSGALG00000043650	GFI1	100	68.204	Gallus_gallus
ENSELUG00000003015	gfi1ab	99	72.525	ENSGAFG00000016637	gfi1ab	100	72.525	Gambusia_affinis
ENSELUG00000003015	gfi1ab	99	63.480	ENSGAFG00000018063	GFI1	100	63.725	Gambusia_affinis
ENSELUG00000003015	gfi1ab	99	73.067	ENSGACG00000004257	gfi1ab	97	73.317	Gasterosteus_aculeatus
ENSELUG00000003015	gfi1ab	99	63.109	ENSGGOG00000005320	GFI1	100	63.341	Gorilla_gorilla
ENSELUG00000003015	gfi1ab	99	74.938	ENSHBUG00000011969	gfi1ab	100	74.938	Haplochromis_burtoni
ENSELUG00000003015	gfi1ab	99	64.055	ENSHGLG00000008020	GFI1	100	64.286	Heterocephalus_glaber_female
ENSELUG00000003015	gfi1ab	99	64.055	ENSHGLG00100000610	GFI1	100	64.286	Heterocephalus_glaber_male
ENSELUG00000003015	gfi1ab	99	57.277	ENSHCOG00000008590	gfi1ab	100	57.277	Hippocampus_comes
ENSELUG00000003015	gfi1ab	99	60.837	ENSHCOG00000019555	GFI1	100	75.676	Hippocampus_comes
ENSELUG00000003015	gfi1ab	99	68.672	ENSIPUG00000010071	gfi1ab	87	68.922	Ictalurus_punctatus
ENSELUG00000003015	gfi1ab	99	63.210	ENSIPUG00000013414	GFI1	100	63.210	Ictalurus_punctatus
ENSELUG00000003015	gfi1ab	99	62.877	ENSSTOG00000014583	GFI1	100	63.109	Ictidomys_tridecemlineatus
ENSELUG00000003015	gfi1ab	99	70.000	ENSKMAG00000003810	gfi1ab	100	70.000	Kryptolebias_marmoratus
ENSELUG00000003015	gfi1ab	99	73.815	ENSLBEG00000027776	gfi1ab	100	74.065	Labrus_bergylta
ENSELUG00000003015	gfi1ab	98	72.081	ENSLACG00000017590	-	99	45.363	Latimeria_chalumnae
ENSELUG00000003015	gfi1ab	99	70.833	ENSLACG00000013362	GFI1	98	71.078	Latimeria_chalumnae
ENSELUG00000003015	gfi1ab	99	75.186	ENSLOCG00000004711	gfi1ab	100	75.434	Lepisosteus_oculatus
ENSELUG00000003015	gfi1ab	99	63.033	ENSLAFG00000018346	GFI1	100	63.679	Loxodonta_africana
ENSELUG00000003015	gfi1ab	99	63.109	ENSMFAG00000045801	GFI1	100	63.341	Macaca_fascicularis
ENSELUG00000003015	gfi1ab	99	63.109	ENSMNEG00000036338	GFI1	100	63.341	Macaca_nemestrina
ENSELUG00000003015	gfi1ab	99	63.109	ENSMLEG00000036181	GFI1	100	63.341	Mandrillus_leucophaeus
ENSELUG00000003015	gfi1ab	99	74.500	ENSMAMG00000008125	gfi1ab	100	74.500	Mastacembelus_armatus
ENSELUG00000003015	gfi1ab	99	74.690	ENSMZEG00005009895	gfi1ab	100	74.690	Maylandia_zebra
ENSELUG00000003015	gfi1ab	86	70.170	ENSMGAG00000008187	GFI1	99	70.455	Meleagris_gallopavo
ENSELUG00000003015	gfi1ab	99	63.426	ENSMICG00000047208	GFI1	100	63.426	Microcebus_murinus
ENSELUG00000003015	gfi1ab	99	67.246	ENSMMOG00000005556	gfi1ab	100	67.246	Mola_mola
ENSELUG00000003015	gfi1ab	99	63.532	ENSMODG00000011802	GFI1	100	63.991	Monodelphis_domestica
ENSELUG00000003015	gfi1ab	99	71.571	ENSMALG00000014672	gfi1ab	100	71.571	Monopterus_albus
ENSELUG00000003015	gfi1ab	99	62.645	MGP_CAROLIEiJ_G0027508	Gfi1	100	99.259	Mus_caroli
ENSELUG00000003015	gfi1ab	99	62.877	ENSMUSG00000029275	Gfi1	100	64.037	Mus_musculus
ENSELUG00000003015	gfi1ab	99	62.877	MGP_PahariEiJ_G0017280	Gfi1	100	99.259	Mus_pahari
ENSELUG00000003015	gfi1ab	99	64.269	MGP_SPRETEiJ_G0028507	Gfi1	100	64.269	Mus_spretus
ENSELUG00000003015	gfi1ab	99	65.594	ENSMPUG00000004178	GFI1	97	66.089	Mustela_putorius_furo
ENSELUG00000003015	gfi1ab	99	62.850	ENSMLUG00000015191	GFI1	97	63.084	Myotis_lucifugus
ENSELUG00000003015	gfi1ab	99	73.956	ENSNBRG00000015774	gfi1ab	100	73.956	Neolamprologus_brichardi
ENSELUG00000003015	gfi1ab	85	64.706	ENSNLEG00000010470	GFI1	91	64.973	Nomascus_leucogenys
ENSELUG00000003015	gfi1ab	99	62.963	ENSOPRG00000001473	GFI1	100	62.963	Ochotona_princeps
ENSELUG00000003015	gfi1ab	99	74.690	ENSONIG00000019246	gfi1ab	100	74.690	Oreochromis_niloticus
ENSELUG00000003015	gfi1ab	98	56.649	ENSOCUG00000023553	GFI1	93	56.915	Oryctolagus_cuniculus
ENSELUG00000003015	gfi1ab	99	68.844	ENSORLG00000013806	gfi1ab	100	68.844	Oryzias_latipes
ENSELUG00000003015	gfi1ab	99	60.945	ENSORLG00000005060	GFI1	100	61.194	Oryzias_latipes
ENSELUG00000003015	gfi1ab	99	56.250	ENSORLG00020002817	GFI1	100	56.250	Oryzias_latipes_hni
ENSELUG00000003015	gfi1ab	99	68.750	ENSORLG00020001602	gfi1ab	100	68.750	Oryzias_latipes_hni
ENSELUG00000003015	gfi1ab	99	59.453	ENSORLG00015006070	GFI1	100	59.950	Oryzias_latipes_hsok
ENSELUG00000003015	gfi1ab	99	60.194	ENSOMEG00000016722	GFI1	100	61.235	Oryzias_melastigma
ENSELUG00000003015	gfi1ab	99	64.090	ENSOGAG00000027913	GFI1	100	64.339	Otolemur_garnettii
ENSELUG00000003015	gfi1ab	97	95.238	ENSOARG00000016329	GFI1	94	47.965	Ovis_aries
ENSELUG00000003015	gfi1ab	99	65.000	ENSPPAG00000042186	GFI1	100	65.250	Pan_paniscus
ENSELUG00000003015	gfi1ab	99	63.805	ENSPPRG00000007521	GFI1	100	64.037	Panthera_pardus
ENSELUG00000003015	gfi1ab	99	62.877	ENSPTRG00000043053	GFI1	100	63.109	Pan_troglodytes
ENSELUG00000003015	gfi1ab	99	63.109	ENSPANG00000016433	GFI1	100	63.341	Papio_anubis
ENSELUG00000003015	gfi1ab	99	76.601	ENSPKIG00000004263	GFI1	100	76.601	Paramormyrops_kingsleyae
ENSELUG00000003015	gfi1ab	86	69.602	ENSPSIG00000008734	GFI1	97	69.886	Pelodiscus_sinensis
ENSELUG00000003015	gfi1ab	99	69.825	ENSPMGG00000012546	gfi1ab	100	70.075	Periophthalmus_magnuspinnatus
ENSELUG00000003015	gfi1ab	58	82.653	ENSPMGG00000011041	GFI1	73	82.653	Periophthalmus_magnuspinnatus
ENSELUG00000003015	gfi1ab	99	65.421	ENSPCIG00000013728	GFI1	100	66.355	Phascolarctos_cinereus
ENSELUG00000003015	gfi1ab	99	73.020	ENSPFOG00000023214	gfi1ab	100	73.020	Poecilia_formosa
ENSELUG00000003015	gfi1ab	99	64.548	ENSPLAG00000005376	GFI1	91	64.792	Poecilia_latipinna
ENSELUG00000003015	gfi1ab	99	73.020	ENSPLAG00000010879	gfi1ab	100	73.020	Poecilia_latipinna
ENSELUG00000003015	gfi1ab	99	73.020	ENSPMEG00000013694	gfi1ab	100	73.020	Poecilia_mexicana
ENSELUG00000003015	gfi1ab	99	64.691	ENSPMEG00000019299	GFI1	100	65.185	Poecilia_mexicana
ENSELUG00000003015	gfi1ab	99	71.891	ENSPREG00000014097	gfi1ab	100	71.891	Poecilia_reticulata
ENSELUG00000003015	gfi1ab	99	56.429	ENSPREG00000007997	GFI1	100	56.667	Poecilia_reticulata
ENSELUG00000003015	gfi1ab	99	52.535	ENSPCAG00000011020	GFI1	100	52.535	Procavia_capensis
ENSELUG00000003015	gfi1ab	99	63.341	ENSPCOG00000020540	GFI1	100	63.341	Propithecus_coquereli
ENSELUG00000003015	gfi1ab	99	63.615	ENSPVAG00000006928	GFI1	100	64.085	Pteropus_vampyrus
ENSELUG00000003015	gfi1ab	99	74.938	ENSPNYG00000021183	gfi1ab	100	74.938	Pundamilia_nyererei
ENSELUG00000003015	gfi1ab	69	47.368	ENSPNAG00000014299	-	92	47.368	Pygocentrus_nattereri
ENSELUG00000003015	gfi1ab	99	69.231	ENSPNAG00000027258	gfi1ab	100	69.231	Pygocentrus_nattereri
ENSELUG00000003015	gfi1ab	99	59.801	ENSPNAG00000028014	GFI1	100	59.801	Pygocentrus_nattereri
ENSELUG00000003015	gfi1ab	99	61.949	ENSRNOG00000002042	Gfi1	100	63.341	Rattus_norvegicus
ENSELUG00000003015	gfi1ab	99	61.949	ENSRBIG00000036467	GFI1	100	63.341	Rhinopithecus_bieti
ENSELUG00000003015	gfi1ab	99	61.949	ENSRROG00000031687	GFI1	100	63.341	Rhinopithecus_roxellana
ENSELUG00000003015	gfi1ab	99	62.500	ENSSBOG00000031300	GFI1	100	64.120	Saimiri_boliviensis_boliviensis
ENSELUG00000003015	gfi1ab	99	76.368	ENSSFOG00015020295	gfi1	100	76.368	Scleropages_formosus
ENSELUG00000003015	gfi1ab	99	70.370	ENSSMAG00000002782	gfi1ab	100	70.123	Scophthalmus_maximus
ENSELUG00000003015	gfi1ab	99	70.968	ENSSDUG00000022410	gfi1ab	100	70.823	Seriola_dumerili
ENSELUG00000003015	gfi1ab	99	70.968	ENSSLDG00000020163	gfi1ab	100	70.823	Seriola_lalandi_dorsalis
ENSELUG00000003015	gfi1ab	79	87.879	ENSSPAG00000009140	gfi1ab	100	90.625	Stegastes_partitus
ENSELUG00000003015	gfi1ab	99	63.232	ENSSSCG00000006902	GFI1	100	63.934	Sus_scrofa
ENSELUG00000003015	gfi1ab	86	69.516	ENSTGUG00000006060	GFI1	99	69.801	Taeniopygia_guttata
ENSELUG00000003015	gfi1ab	99	68.828	ENSTRUG00000000415	gfi1ab	100	68.828	Takifugu_rubripes
ENSELUG00000003015	gfi1ab	99	67.332	ENSTNIG00000000651	gfi1ab	97	67.742	Tetraodon_nigroviridis
ENSELUG00000003015	gfi1ab	99	63.805	ENSTTRG00000000082	GFI1	100	64.037	Tursiops_truncatus
ENSELUG00000003015	gfi1ab	99	65.789	ENSUAMG00000021124	GFI1	91	66.268	Ursus_americanus
ENSELUG00000003015	gfi1ab	99	66.422	ENSXETG00000023006	gfi1	98	66.667	Xenopus_tropicalis
ENSELUG00000003015	gfi1ab	99	72.772	ENSXMAG00000010523	gfi1ab	100	72.772	Xiphophorus_maculatus
ENSELUG00000003015	gfi1ab	99	48.372	ENSXMAG00000009274	GFI1	70	57.910	Xiphophorus_maculatus