EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000003242 (Gene tree)
Gene ID: 105022312
Gene Symbol: gtsf1
Alias: -
Full Name: gametocyte specific factor 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 10262 bases
Position: chrLG12:11223176-11233437
Accession: 105022312
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000001794	zf-U11-48K	PF05253.12	1.3e-18	1	2
ENSELUP00000001794	zf-U11-48K	PF05253.12	1.3e-18	2	2
ENSELUP00000027123	zf-U11-48K	PF05253.12	2.3e-18	1	2
ENSELUP00000027123	zf-U11-48K	PF05253.12	2.3e-18	2	2
ENSELUP00000001807	zf-U11-48K	PF05253.12	2.6e-17	1	2
ENSELUP00000001807	zf-U11-48K	PF05253.12	2.6e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000016769	-	1164	XM_010890578	ENSELUP00000027123	182 (aa)	XP_010888880	UPI000576992F
ENSELUT00000016775	-	799	-	ENSELUP00000001807	194 (aa)	-	-
ENSELUT00000016796	-	468	-	ENSELUP00000001794	155 (aa)	-	-

Gene Model

Click here to download ENSELUG00000003242's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000003242's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000003242	gtsf1	91	50.296	ENSAPOG00000000311	-	94	50.296	Acanthochromis_polyacanthus
ENSELUG00000003242	gtsf1	99	47.778	ENSAPOG00000021951	-	98	47.778	Acanthochromis_polyacanthus
ENSELUG00000003242	gtsf1	81	62.838	ENSACIG00000013400	zgc:56699	82	62.838	Amphilophus_citrinellus
ENSELUG00000003242	gtsf1	99	51.111	ENSAOCG00000013650	-	98	51.111	Amphiprion_ocellaris
ENSELUG00000003242	gtsf1	99	43.889	ENSAPEG00000006689	zgc:56699	97	43.889	Amphiprion_percula
ENSELUG00000003242	gtsf1	98	60.335	ENSATEG00000024058	zgc:56699	96	60.335	Anabas_testudineus
ENSELUG00000003242	gtsf1	96	51.412	ENSACLG00000023562	zgc:56699	87	51.412	Astatotilapia_calliptera
ENSELUG00000003242	gtsf1	99	64.835	ENSAMXG00000038346	zgc:56699	99	64.835	Astyanax_mexicanus
ENSELUG00000003242	gtsf1	85	59.873	ENSAMXG00000036095	-	65	62.420	Astyanax_mexicanus
ENSELUG00000003242	gtsf1	98	55.135	ENSCSEG00000021520	zgc:56699	82	55.135	Cynoglossus_semilaevis
ENSELUG00000003242	gtsf1	85	51.799	ENSCVAG00000009972	zgc:56699	75	51.799	Cyprinodon_variegatus
ENSELUG00000003242	gtsf1	82	58.553	ENSDARG00000099586	CR382383.2	84	58.553	Danio_rerio
ENSELUG00000003242	gtsf1	100	58.152	ENSDARG00000000887	zgc:56699	100	58.152	Danio_rerio
ENSELUG00000003242	gtsf1	65	38.614	ENSEBUG00000000411	-	60	38.614	Eptatretus_burgeri
ENSELUG00000003242	gtsf1	59	40.541	ENSEBUG00000005681	-	59	40.541	Eptatretus_burgeri
ENSELUG00000003242	gtsf1	62	45.690	ENSEBUG00000005577	-	60	45.690	Eptatretus_burgeri
ENSELUG00000003242	gtsf1	85	62.179	ENSFHEG00000006036	zgc:56699	81	56.934	Fundulus_heteroclitus
ENSELUG00000003242	gtsf1	86	52.632	ENSGMOG00000007295	zgc:56699	98	52.632	Gadus_morhua
ENSELUG00000003242	gtsf1	64	44.628	ENSGALG00000035365	-	69	44.628	Gallus_gallus
ENSELUG00000003242	gtsf1	99	58.242	ENSGAFG00000020743	zgc:56699	97	58.242	Gambusia_affinis
ENSELUG00000003242	gtsf1	96	50.847	ENSHBUG00000005327	zgc:56699	95	50.847	Haplochromis_burtoni
ENSELUG00000003242	gtsf1	99	46.703	ENSHCOG00000010296	-	100	46.703	Hippocampus_comes
ENSELUG00000003242	gtsf1	100	50.000	ENSIPUG00000011498	zgc:56699	96	50.000	Ictalurus_punctatus
ENSELUG00000003242	gtsf1	86	63.694	ENSLBEG00000015981	zgc:56699	87	53.503	Labrus_bergylta
ENSELUG00000003242	gtsf1	81	53.378	ENSLOCG00000004469	zgc:56699	99	54.054	Lepisosteus_oculatus
ENSELUG00000003242	gtsf1	99	56.354	ENSMAMG00000001846	zgc:56699	97	56.354	Mastacembelus_armatus
ENSELUG00000003242	gtsf1	96	51.412	ENSMZEG00005026479	zgc:56699	87	51.412	Maylandia_zebra
ENSELUG00000003242	gtsf1	98	48.649	ENSMMOG00000017331	zgc:56699	96	48.649	Mola_mola
ENSELUG00000003242	gtsf1	96	50.847	ENSNBRG00000006336	zgc:56699	95	50.847	Neolamprologus_brichardi
ENSELUG00000003242	gtsf1	98	51.934	ENSONIG00000016720	zgc:56699	89	51.934	Oreochromis_niloticus
ENSELUG00000003242	gtsf1	70	36.364	ENSOANG00000030381	-	79	36.364	Ornithorhynchus_anatinus
ENSELUG00000003242	gtsf1	67	58.197	ENSORLG00000025877	-	74	58.197	Oryzias_latipes
ENSELUG00000003242	gtsf1	97	48.315	ENSORLG00000015258	-	95	48.315	Oryzias_latipes
ENSELUG00000003242	gtsf1	67	58.197	ENSORLG00020011013	-	74	58.197	Oryzias_latipes_hni
ENSELUG00000003242	gtsf1	97	47.514	ENSORLG00020010990	-	95	47.514	Oryzias_latipes_hni
ENSELUG00000003242	gtsf1	97	47.486	ENSORLG00015004961	zgc:56699	95	47.486	Oryzias_latipes_hsok
ENSELUG00000003242	gtsf1	64	55.556	ENSOMEG00000013200	-	76	55.556	Oryzias_melastigma
ENSELUG00000003242	gtsf1	94	49.123	ENSOMEG00000021773	-	90	49.123	Oryzias_melastigma
ENSELUG00000003242	gtsf1	83	53.642	ENSOMEG00000021739	-	84	53.642	Oryzias_melastigma
ENSELUG00000003242	gtsf1	100	55.080	ENSPKIG00000017039	zgc:56699	100	55.080	Paramormyrops_kingsleyae
ENSELUG00000003242	gtsf1	99	48.663	ENSPMGG00000023241	zgc:56699	96	48.663	Periophthalmus_magnuspinnatus
ENSELUG00000003242	gtsf1	62	40.800	ENSPMAG00000009653	-	93	40.800	Petromyzon_marinus
ENSELUG00000003242	gtsf1	99	57.143	ENSPFOG00000009204	zgc:56699	97	57.143	Poecilia_formosa
ENSELUG00000003242	gtsf1	99	51.111	ENSPLAG00000009088	zgc:56699	97	51.111	Poecilia_latipinna
ENSELUG00000003242	gtsf1	99	57.143	ENSPMEG00000001443	zgc:56699	97	57.143	Poecilia_mexicana
ENSELUG00000003242	gtsf1	99	58.242	ENSPREG00000000745	zgc:56699	97	58.242	Poecilia_reticulata
ENSELUG00000003242	gtsf1	96	51.412	ENSPNYG00000002811	zgc:56699	95	51.412	Pundamilia_nyererei
ENSELUG00000003242	gtsf1	100	65.385	ENSPNAG00000005165	zgc:56699	100	65.385	Pygocentrus_nattereri
ENSELUG00000003242	gtsf1	81	64.189	ENSSFOG00015021600	zgc:56699	81	64.189	Scleropages_formosus
ENSELUG00000003242	gtsf1	98	55.307	ENSSMAG00000020886	zgc:56699	96	55.307	Scophthalmus_maximus
ENSELUG00000003242	gtsf1	98	57.542	ENSSDUG00000002033	zgc:56699	96	57.542	Seriola_dumerili
ENSELUG00000003242	gtsf1	98	56.983	ENSSLDG00000014113	zgc:56699	96	56.983	Seriola_lalandi_dorsalis
ENSELUG00000003242	gtsf1	84	51.948	ENSSPAG00000010005	-	97	51.948	Stegastes_partitus
ENSELUG00000003242	gtsf1	79	63.889	ENSSPAG00000019854	-	98	55.556	Stegastes_partitus
ENSELUG00000003242	gtsf1	84	52.941	ENSTRUG00000015537	zgc:56699	84	52.941	Takifugu_rubripes
ENSELUG00000003242	gtsf1	66	59.350	ENSTNIG00000012515	zgc:56699	89	52.174	Tetraodon_nigroviridis
ENSELUG00000003242	gtsf1	99	52.222	ENSXCOG00000014400	zgc:56699	86	52.222	Xiphophorus_couchianus
ENSELUG00000003242	gtsf1	99	58.242	ENSXMAG00000011692	zgc:56699	97	58.242	Xiphophorus_maculatus