EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSELUG00000003385 (Gene tree)
Gene ID
105015814
Gene Symbol
srrm1
Alias
wu:fb34f04|wu:fb38b06|zgc:63802
Full Name
serine and arginine repetitive matrix 1
Gene Type
protein_coding
Species
Esox_lucius
Status
putative
Strand
Minus strand
Length
9446 bases
Position
chrLG15:20295837-20305282
Accession
105015814
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSELUP00000002003PWIPF01480.179.7e-3111
ENSELUP00000001991PWIPF01480.173e-1311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSELUT00000016475-1428-ENSELUP0000000199179 (aa)--
ENSELUT00000016460-4262XM_010879233ENSELUP00000002003874 (aa)XP_010877535UPI0005767996
Gene Model
Click here to download ENSELUG00000003385's gene model file
Pathways
Pathway IDPathway NameSource
els03013RNA transportKEGG
els03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000003385's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSELUG00000003385srrm110097.468ENSAPOG00000001170srrm110097.468Acanthochromis_polyacanthus
ENSELUG00000003385srrm110098.734ENSDARG00000001244srrm110098.734Danio_rerio
ENSELUG00000003385srrm19997.436ENSGACG00000007266srrm16194.304Gasterosteus_aculeatus
ENSELUG00000003385srrm19997.436ENSOMEG00000014110srrm17497.436Oryzias_melastigma
ENSELUG00000003385srrm19998.718ENSPKIG00000008252srrm16071.579Paramormyrops_kingsleyae
ENSELUG00000003385srrm19997.436ENSPLAG00000002058srrm17797.436Poecilia_latipinna
ENSELUG00000003385srrm110097.468ENSPLAG00000006807srrm110097.468Poecilia_latipinna
ENSELUG00000003385srrm19997.436ENSPREG00000002652srrm18969.858Poecilia_reticulata
ENSELUG00000003385srrm19997.436ENSXCOG00000011828srrm17797.436Xiphophorus_couchianus
ENSELUG00000003385srrm19997.436ENSXMAG00000018863srrm18970.213Xiphophorus_maculatus

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