EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000003465 (Gene tree)
Gene ID: 105015818
Gene Symbol: syf2
Alias: -
Full Name: SYF2 pre-mRNA splicing factor
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 5883 bases
Position: chrLG15:20082589-20088471
Accession: 105015818
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000027290	SYF2	PF08231.12	1.5e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000016323	-	2199	-	ENSELUP00000027290	238 (aa)	-	C1BXQ3

Gene Model

Click here to download ENSELUG00000003465's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000003465's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000003465	syf2	100	80.252	ENSG00000117614	SYF2	96	80.252	Homo_sapiens
ENSELUG00000003465	syf2	93	90.991	ENSAPOG00000001174	syf2	100	87.395	Acanthochromis_polyacanthus
ENSELUG00000003465	syf2	82	85.641	ENSAMEG00000010134	-	100	85.641	Ailuropoda_melanoleuca
ENSELUG00000003465	syf2	92	84.862	ENSAMEG00000010115	-	90	84.862	Ailuropoda_melanoleuca
ENSELUG00000003465	syf2	97	84.914	ENSACIG00000023688	syf2	93	84.914	Amphilophus_citrinellus
ENSELUG00000003465	syf2	99	87.815	ENSAOCG00000022046	syf2	99	87.179	Amphiprion_ocellaris
ENSELUG00000003465	syf2	92	86.878	ENSAOCG00000010912	syf2	69	86.878	Amphiprion_ocellaris
ENSELUG00000003465	syf2	99	87.815	ENSAPEG00000018858	syf2	92	87.815	Amphiprion_percula
ENSELUG00000003465	syf2	91	90.783	ENSATEG00000007745	syf2	100	86.134	Anabas_testudineus
ENSELUG00000003465	syf2	84	85.000	ENSAPLG00000016435	SYF2	99	85.000	Anas_platyrhynchos
ENSELUG00000003465	syf2	70	71.856	ENSACAG00000026777	-	100	71.856	Anolis_carolinensis
ENSELUG00000003465	syf2	86	83.333	ENSACAG00000013653	-	100	83.333	Anolis_carolinensis
ENSELUG00000003465	syf2	99	78.776	ENSANAG00000032473	SYF2	96	81.092	Aotus_nancymaae
ENSELUG00000003465	syf2	93	86.937	ENSACLG00000019916	syf2	100	83.613	Astatotilapia_calliptera
ENSELUG00000003465	syf2	99	87.395	ENSAMXG00000004051	syf2	100	87.395	Astyanax_mexicanus
ENSELUG00000003465	syf2	93	85.520	ENSBTAG00000001651	SYF2	94	85.520	Bos_taurus
ENSELUG00000003465	syf2	87	52.133	WBGene00019402	syf-2	100	49.167	Caenorhabditis_elegans
ENSELUG00000003465	syf2	99	78.776	ENSCJAG00000046570	SYF2	100	79.835	Callithrix_jacchus
ENSELUG00000003465	syf2	92	78.995	ENSCAFG00000030331	-	93	78.995	Canis_familiaris
ENSELUG00000003465	syf2	91	85.185	ENSCAFG00000012895	-	89	84.862	Canis_familiaris
ENSELUG00000003465	syf2	91	85.185	ENSCAFG00020021091	-	89	84.862	Canis_lupus_dingo
ENSELUG00000003465	syf2	76	77.473	ENSCAFG00020021094	-	95	77.473	Canis_lupus_dingo
ENSELUG00000003465	syf2	100	79.012	ENSCHIG00000020874	SYF2	99	80.335	Capra_hircus
ENSELUG00000003465	syf2	99	79.012	ENSTSYG00000005114	SYF2	100	79.012	Carlito_syrichta
ENSELUG00000003465	syf2	83	85.859	ENSCAPG00000010006	SYF2	100	85.859	Cavia_aperea
ENSELUG00000003465	syf2	99	80.591	ENSCPOG00000005326	SYF2	95	80.591	Cavia_porcellus
ENSELUG00000003465	syf2	99	78.776	ENSCCAG00000022459	SYF2	96	80.672	Cebus_capucinus
ENSELUG00000003465	syf2	100	79.412	ENSCATG00000026917	SYF2	96	79.412	Cercocebus_atys
ENSELUG00000003465	syf2	98	82.051	ENSCLAG00000008474	SYF2	94	82.051	Chinchilla_lanigera
ENSELUG00000003465	syf2	100	79.412	ENSCSAG00000000948	SYF2	96	79.412	Chlorocebus_sabaeus
ENSELUG00000003465	syf2	70	69.880	ENSCHOG00000005273	-	91	69.880	Choloepus_hoffmanni
ENSELUG00000003465	syf2	93	85.973	ENSCPBG00000025073	SYF2	94	82.203	Chrysemys_picta_bellii
ENSELUG00000003465	syf2	94	52.889	ENSCING00000003017	-	94	53.333	Ciona_intestinalis
ENSELUG00000003465	syf2	89	50.000	ENSCSAVG00000006627	-	98	50.000	Ciona_savignyi
ENSELUG00000003465	syf2	100	69.328	ENSCANG00000037322	SYF2	96	69.328	Colobus_angolensis_palliatus
ENSELUG00000003465	syf2	99	79.752	ENSCGRG00001020733	Syf2	100	79.752	Cricetulus_griseus_chok1gshd
ENSELUG00000003465	syf2	82	86.224	ENSCGRG00000005095	Syf2	96	85.930	Cricetulus_griseus_crigri
ENSELUG00000003465	syf2	92	85.321	ENSCSEG00000000117	syf2	100	79.079	Cynoglossus_semilaevis
ENSELUG00000003465	syf2	93	88.235	ENSCVAG00000019543	syf2	100	83.682	Cyprinodon_variegatus
ENSELUG00000003465	syf2	99	85.714	ENSDARG00000004706	syf2	100	85.714	Danio_rerio
ENSELUG00000003465	syf2	93	85.973	ENSDNOG00000047605	SYF2	90	85.973	Dasypus_novemcinctus
ENSELUG00000003465	syf2	93	85.135	ENSDORG00000001274	Syf2	91	85.135	Dipodomys_ordii
ENSELUG00000003465	syf2	92	55.000	FBgn0033556	CG12343	97	55.000	Drosophila_melanogaster
ENSELUG00000003465	syf2	94	66.368	ENSETEG00000015729	SYF2	96	66.368	Echinops_telfairi
ENSELUG00000003465	syf2	83	60.406	ENSEBUG00000015402	syf2	95	60.406	Eptatretus_burgeri
ENSELUG00000003465	syf2	92	86.239	ENSEASG00005004224	-	89	86.239	Equus_asinus_asinus
ENSELUG00000003465	syf2	100	71.901	ENSEASG00005004232	-	100	71.901	Equus_asinus_asinus
ENSELUG00000003465	syf2	94	84.375	ENSECAG00000010440	-	91	86.239	Equus_caballus
ENSELUG00000003465	syf2	93	85.520	ENSECAG00000012023	-	90	85.520	Equus_caballus
ENSELUG00000003465	syf2	67	74.375	ENSEEUG00000015084	SYF2	87	74.375	Erinaceus_europaeus
ENSELUG00000003465	syf2	92	85.321	ENSFCAG00000043095	-	89	85.321	Felis_catus
ENSELUG00000003465	syf2	100	78.862	ENSFCAG00000010324	-	85	78.862	Felis_catus
ENSELUG00000003465	syf2	86	82.843	ENSFALG00000000460	SYF2	89	81.818	Ficedula_albicollis
ENSELUG00000003465	syf2	99	79.508	ENSFDAG00000008310	SYF2	100	79.508	Fukomys_damarensis
ENSELUG00000003465	syf2	93	72.646	ENSFHEG00000007238	syf2	99	72.646	Fundulus_heteroclitus
ENSELUG00000003465	syf2	93	90.045	ENSGMOG00000019138	syf2	98	90.045	Gadus_morhua
ENSELUG00000003465	syf2	93	85.068	ENSGALG00000013639	SYF2	88	85.068	Gallus_gallus
ENSELUG00000003465	syf2	99	81.933	ENSGAFG00000019435	syf2	100	81.933	Gambusia_affinis
ENSELUG00000003465	syf2	94	88.789	ENSGACG00000007305	syf2	100	84.937	Gasterosteus_aculeatus
ENSELUG00000003465	syf2	93	86.425	ENSGAGG00000010670	SYF2	94	83.051	Gopherus_agassizii
ENSELUG00000003465	syf2	100	80.252	ENSGGOG00000012796	SYF2	96	80.252	Gorilla_gorilla
ENSELUG00000003465	syf2	97	83.621	ENSHBUG00000020477	syf2	100	83.193	Haplochromis_burtoni
ENSELUG00000003465	syf2	97	71.861	ENSHGLG00000004304	-	95	72.414	Heterocephalus_glaber_female
ENSELUG00000003465	syf2	98	82.051	ENSHGLG00000014393	SYF2	94	82.051	Heterocephalus_glaber_female
ENSELUG00000003465	syf2	98	82.051	ENSHGLG00100014722	SYF2	94	82.051	Heterocephalus_glaber_male
ENSELUG00000003465	syf2	100	85.356	ENSHCOG00000012904	syf2	78	85.356	Hippocampus_comes
ENSELUG00000003465	syf2	99	85.477	ENSIPUG00000019859	syf2	100	85.477	Ictalurus_punctatus
ENSELUG00000003465	syf2	61	81.507	ENSSTOG00000023984	SYF2	100	81.507	Ictidomys_tridecemlineatus
ENSELUG00000003465	syf2	92	79.452	ENSJJAG00000013301	Syf2	94	86.432	Jaculus_jaculus
ENSELUG00000003465	syf2	99	83.544	ENSKMAG00000013856	syf2	100	83.544	Kryptolebias_marmoratus
ENSELUG00000003465	syf2	91	92.166	ENSLBEG00000014425	syf2	100	86.975	Labrus_bergylta
ENSELUG00000003465	syf2	93	83.784	ENSLACG00000012064	SYF2	93	83.784	Latimeria_chalumnae
ENSELUG00000003465	syf2	99	84.034	ENSLOCG00000002728	syf2	95	84.034	Lepisosteus_oculatus
ENSELUG00000003465	syf2	77	58.152	ENSLAFG00000030814	-	100	58.152	Loxodonta_africana
ENSELUG00000003465	syf2	93	86.425	ENSLAFG00000023150	-	90	86.425	Loxodonta_africana
ENSELUG00000003465	syf2	100	79.412	ENSMFAG00000041831	SYF2	96	79.412	Macaca_fascicularis
ENSELUG00000003465	syf2	91	85.185	ENSMMUG00000002968	SYF2	96	79.832	Macaca_mulatta
ENSELUG00000003465	syf2	100	79.412	ENSMNEG00000030180	SYF2	96	79.412	Macaca_nemestrina
ENSELUG00000003465	syf2	100	79.412	ENSMLEG00000030248	SYF2	96	79.412	Mandrillus_leucophaeus
ENSELUG00000003465	syf2	100	82.845	ENSMAMG00000010403	syf2	98	83.682	Mastacembelus_armatus
ENSELUG00000003465	syf2	99	84.034	ENSMZEG00005006429	syf2	100	84.034	Maylandia_zebra
ENSELUG00000003465	syf2	84	85.427	ENSMGAG00000002019	SYF2	100	85.427	Meleagris_gallopavo
ENSELUG00000003465	syf2	99	80.247	ENSMAUG00000018974	Syf2	100	80.247	Mesocricetus_auratus
ENSELUG00000003465	syf2	84	86.432	ENSMICG00000016191	SYF2	100	86.432	Microcebus_murinus
ENSELUG00000003465	syf2	99	80.165	ENSMOCG00000022938	Syf2	100	80.165	Microtus_ochrogaster
ENSELUG00000003465	syf2	93	87.387	ENSMMOG00000002396	syf2	93	87.387	Mola_mola
ENSELUG00000003465	syf2	93	81.166	ENSMODG00000013951	-	97	81.166	Monodelphis_domestica
ENSELUG00000003465	syf2	99	85.062	ENSMALG00000010706	syf2	100	85.477	Monopterus_albus
ENSELUG00000003465	syf2	99	81.070	MGP_CAROLIEiJ_G0026633	Syf2	100	81.070	Mus_caroli
ENSELUG00000003465	syf2	99	81.070	ENSMUSG00000028821	Syf2	100	81.070	Mus_musculus
ENSELUG00000003465	syf2	99	81.070	MGP_PahariEiJ_G0028966	Syf2	100	81.070	Mus_pahari
ENSELUG00000003465	syf2	99	81.070	MGP_SPRETEiJ_G0027613	Syf2	100	81.070	Mus_spretus
ENSELUG00000003465	syf2	91	85.185	ENSMPUG00000015802	-	89	84.862	Mustela_putorius_furo
ENSELUG00000003465	syf2	100	78.226	ENSMPUG00000015801	-	100	78.226	Mustela_putorius_furo
ENSELUG00000003465	syf2	100	79.412	ENSMLUG00000001885	SYF2	97	79.412	Myotis_lucifugus
ENSELUG00000003465	syf2	99	80.932	ENSNGAG00000007912	Syf2	96	80.932	Nannospalax_galili
ENSELUG00000003465	syf2	100	76.132	ENSNBRG00000010720	syf2	100	76.132	Neolamprologus_brichardi
ENSELUG00000003465	syf2	100	80.252	ENSNLEG00000035185	SYF2	96	80.252	Nomascus_leucogenys
ENSELUG00000003465	syf2	99	80.426	ENSOPRG00000012870	SYF2	95	80.426	Ochotona_princeps
ENSELUG00000003465	syf2	95	82.456	ENSODEG00000017664	-	96	82.456	Octodon_degus
ENSELUG00000003465	syf2	98	72.650	ENSODEG00000014338	-	96	72.650	Octodon_degus
ENSELUG00000003465	syf2	93	86.937	ENSONIG00000008213	syf2	100	83.613	Oreochromis_niloticus
ENSELUG00000003465	syf2	85	85.644	ENSOANG00000009552	SYF2	100	85.644	Ornithorhynchus_anatinus
ENSELUG00000003465	syf2	91	86.574	ENSOCUG00000013050	SYF2	95	81.702	Oryctolagus_cuniculus
ENSELUG00000003465	syf2	94	86.547	ENSORLG00000028820	syf2	96	86.547	Oryzias_latipes
ENSELUG00000003465	syf2	100	82.353	ENSORLG00020018333	syf2	100	82.700	Oryzias_latipes_hni
ENSELUG00000003465	syf2	100	81.933	ENSORLG00015014665	syf2	100	81.933	Oryzias_latipes_hsok
ENSELUG00000003465	syf2	100	83.613	ENSOMEG00000013911	syf2	100	83.613	Oryzias_melastigma
ENSELUG00000003465	syf2	99	80.498	ENSOGAG00000009962	SYF2	99	80.498	Otolemur_garnettii
ENSELUG00000003465	syf2	93	84.305	ENSOARG00000006348	-	90	84.305	Ovis_aries
ENSELUG00000003465	syf2	82	58.462	ENSOARG00000006269	-	100	58.462	Ovis_aries
ENSELUG00000003465	syf2	100	80.252	ENSPPAG00000036579	SYF2	96	80.252	Pan_paniscus
ENSELUG00000003465	syf2	92	86.239	ENSPPRG00000001638	-	89	86.239	Panthera_pardus
ENSELUG00000003465	syf2	92	85.321	ENSPPRG00000001651	-	89	85.321	Panthera_pardus
ENSELUG00000003465	syf2	92	85.321	ENSPTIG00000007036	-	89	85.321	Panthera_tigris_altaica
ENSELUG00000003465	syf2	91	86.574	ENSPTIG00000005711	-	80	85.455	Panthera_tigris_altaica
ENSELUG00000003465	syf2	100	80.252	ENSPTRG00000000352	SYF2	96	80.252	Pan_troglodytes
ENSELUG00000003465	syf2	100	79.412	ENSPANG00000008139	SYF2	96	79.412	Papio_anubis
ENSELUG00000003465	syf2	99	86.920	ENSPKIG00000008130	syf2	100	86.920	Paramormyrops_kingsleyae
ENSELUG00000003465	syf2	99	80.932	ENSPSIG00000011816	SYF2	91	80.932	Pelodiscus_sinensis
ENSELUG00000003465	syf2	99	85.232	ENSPMGG00000008755	syf2	91	85.232	Periophthalmus_magnuspinnatus
ENSELUG00000003465	syf2	99	80.247	ENSPEMG00000008283	Syf2	100	80.247	Peromyscus_maniculatus_bairdii
ENSELUG00000003465	syf2	93	85.068	ENSPCIG00000014235	SYF2	88	85.068	Phascolarctos_cinereus
ENSELUG00000003465	syf2	93	86.486	ENSPFOG00000004116	syf2	92	86.486	Poecilia_formosa
ENSELUG00000003465	syf2	93	86.425	ENSPLAG00000006691	syf2	95	86.036	Poecilia_latipinna
ENSELUG00000003465	syf2	99	79.412	ENSPMEG00000011684	syf2	100	79.412	Poecilia_mexicana
ENSELUG00000003465	syf2	91	87.500	ENSPREG00000003009	syf2	100	82.353	Poecilia_reticulata
ENSELUG00000003465	syf2	100	80.672	ENSPPYG00000001713	SYF2	96	80.672	Pongo_abelii
ENSELUG00000003465	syf2	99	55.967	ENSPCOG00000027011	SYF2	100	55.967	Propithecus_coquereli
ENSELUG00000003465	syf2	93	74.661	ENSPVAG00000005841	SYF2	90	74.661	Pteropus_vampyrus
ENSELUG00000003465	syf2	93	86.937	ENSPNYG00000004979	syf2	100	83.613	Pundamilia_nyererei
ENSELUG00000003465	syf2	99	88.235	ENSPNAG00000015570	syf2	100	88.235	Pygocentrus_nattereri
ENSELUG00000003465	syf2	99	81.070	ENSRNOG00000060597	Syf2	100	81.070	Rattus_norvegicus
ENSELUG00000003465	syf2	100	77.311	ENSRBIG00000042970	SYF2	96	77.311	Rhinopithecus_bieti
ENSELUG00000003465	syf2	100	79.412	ENSRROG00000001347	SYF2	96	79.412	Rhinopithecus_roxellana
ENSELUG00000003465	syf2	100	80.672	ENSSBOG00000020184	SYF2	96	80.672	Saimiri_boliviensis_boliviensis
ENSELUG00000003465	syf2	93	84.163	ENSSHAG00000015630	-	89	84.163	Sarcophilus_harrisii
ENSELUG00000003465	syf2	86	84.951	ENSSHAG00000007152	-	100	84.951	Sarcophilus_harrisii
ENSELUG00000003465	syf2	99	86.920	ENSSFOG00015023647	syf2	100	86.920	Scleropages_formosus
ENSELUG00000003465	syf2	99	82.353	ENSSMAG00000009867	syf2	100	82.353	Scophthalmus_maximus
ENSELUG00000003465	syf2	99	86.134	ENSSDUG00000013072	syf2	100	86.134	Seriola_dumerili
ENSELUG00000003465	syf2	99	86.134	ENSSLDG00000012677	syf2	100	86.134	Seriola_lalandi_dorsalis
ENSELUG00000003465	syf2	93	66.516	ENSSARG00000012889	SYF2	91	66.516	Sorex_araneus
ENSELUG00000003465	syf2	93	85.068	ENSSPUG00000005251	SYF2	87	85.068	Sphenodon_punctatus
ENSELUG00000003465	syf2	100	83.613	ENSSPAG00000009626	syf2	100	83.613	Stegastes_partitus
ENSELUG00000003465	syf2	93	85.068	ENSSSCG00000037481	SYF2	90	85.068	Sus_scrofa
ENSELUG00000003465	syf2	63	56.954	ENSTGUG00000001126	SYF2	84	57.310	Taeniopygia_guttata
ENSELUG00000003465	syf2	99	82.500	ENSTRUG00000001499	syf2	95	81.435	Takifugu_rubripes
ENSELUG00000003465	syf2	93	85.135	ENSTNIG00000016912	syf2	99	85.135	Tetraodon_nigroviridis
ENSELUG00000003465	syf2	99	59.836	ENSTBEG00000017370	SYF2	99	59.836	Tupaia_belangeri
ENSELUG00000003465	syf2	99	78.776	ENSTTRG00000003550	SYF2	100	78.776	Tursiops_truncatus
ENSELUG00000003465	syf2	92	85.321	ENSUAMG00000002897	SYF2	89	85.321	Ursus_americanus
ENSELUG00000003465	syf2	91	85.185	ENSUMAG00000013108	SYF2	89	84.862	Ursus_maritimus
ENSELUG00000003465	syf2	99	78.776	ENSVPAG00000005705	SYF2	100	78.776	Vicugna_pacos
ENSELUG00000003465	syf2	91	85.185	ENSVVUG00000027175	-	89	84.862	Vulpes_vulpes
ENSELUG00000003465	syf2	100	77.016	ENSVVUG00000027181	-	100	77.016	Vulpes_vulpes
ENSELUG00000003465	syf2	94	80.804	ENSXETG00000022797	syf2	90	80.804	Xenopus_tropicalis
ENSELUG00000003465	syf2	99	81.513	ENSXMAG00000022698	syf2	100	82.353	Xiphophorus_maculatus