EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000003476 (Gene tree)
Gene ID: 105029420
Gene Symbol: shq1
Alias: zgc:158255
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 42254 bases
Position: chrLG17:29373323-29415576
Accession: 105029420
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000027298	SHQ1	PF04925.15	2.3e-65	1	1
ENSELUP00000027301	SHQ1	PF04925.15	2.3e-65	1	1
ENSELUP00000027284	SHQ1	PF04925.15	7e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000016317	-	1362	-	ENSELUP00000027284	453 (aa)	-	-
ENSELUT00000016293	-	5100	XM_010902771	ENSELUP00000027301	589 (aa)	XP_010901073	UPI000661F564
ENSELUT00000016303	-	5615	XM_010902770	ENSELUP00000027298	589 (aa)	XP_010901072	UPI000661F564

Gene Model

Click here to download ENSELUG00000003476's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000003476's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000003476	shq1	93	51.531	ENSG00000144736	SHQ1	100	72.000	Homo_sapiens
ENSELUG00000003476	shq1	99	64.379	ENSAPOG00000000397	shq1	98	64.120	Acanthochromis_polyacanthus
ENSELUG00000003476	shq1	89	54.741	ENSAMEG00000015140	SHQ1	72	61.779	Ailuropoda_melanoleuca
ENSELUG00000003476	shq1	99	63.306	ENSACIG00000021249	shq1	98	61.139	Amphilophus_citrinellus
ENSELUG00000003476	shq1	99	64.123	ENSAOCG00000023311	shq1	98	64.013	Amphiprion_ocellaris
ENSELUG00000003476	shq1	99	64.321	ENSAPEG00000021686	shq1	98	64.214	Amphiprion_percula
ENSELUG00000003476	shq1	98	64.784	ENSATEG00000008475	shq1	97	63.926	Anabas_testudineus
ENSELUG00000003476	shq1	81	58.140	ENSAPLG00000013926	SHQ1	81	60.482	Anas_platyrhynchos
ENSELUG00000003476	shq1	98	50.242	ENSACAG00000014809	SHQ1	90	49.097	Anolis_carolinensis
ENSELUG00000003476	shq1	91	39.714	ENSANAG00000030500	-	68	44.615	Aotus_nancymaae
ENSELUG00000003476	shq1	90	53.345	ENSANAG00000029241	SHQ1	72	60.577	Aotus_nancymaae
ENSELUG00000003476	shq1	99	61.450	ENSACLG00000023077	shq1	98	58.333	Astatotilapia_calliptera
ENSELUG00000003476	shq1	79	69.459	ENSAMXG00000043822	shq1	65	69.459	Astyanax_mexicanus
ENSELUG00000003476	shq1	89	53.240	ENSBTAG00000005436	SHQ1	67	58.763	Bos_taurus
ENSELUG00000003476	shq1	82	30.769	WBGene00021655	Y48A5A.1	91	31.796	Caenorhabditis_elegans
ENSELUG00000003476	shq1	90	51.937	ENSCJAG00000015131	SHQ1	72	60.096	Callithrix_jacchus
ENSELUG00000003476	shq1	92	52.174	ENSCAFG00000006434	SHQ1	72	61.298	Canis_familiaris
ENSELUG00000003476	shq1	92	52.348	ENSCAFG00020016743	SHQ1	72	61.538	Canis_lupus_dingo
ENSELUG00000003476	shq1	89	52.857	ENSCHIG00000012271	SHQ1	61	58.505	Capra_hircus
ENSELUG00000003476	shq1	90	50.000	ENSTSYG00000014439	SHQ1	72	57.664	Carlito_syrichta
ENSELUG00000003476	shq1	82	48.988	ENSCAPG00000009343	SHQ1	50	78.788	Cavia_aperea
ENSELUG00000003476	shq1	81	58.355	ENSCPOG00000011443	SHQ1	71	60.241	Cavia_porcellus
ENSELUG00000003476	shq1	81	48.964	ENSCCAG00000027080	SHQ1	69	50.481	Cebus_capucinus
ENSELUG00000003476	shq1	90	40.747	ENSCCAG00000036087	-	70	46.287	Cebus_capucinus
ENSELUG00000003476	shq1	89	53.214	ENSCATG00000041238	SHQ1	71	61.353	Cercocebus_atys
ENSELUG00000003476	shq1	92	52.604	ENSCLAG00000004206	SHQ1	72	61.111	Chinchilla_lanigera
ENSELUG00000003476	shq1	78	48.394	ENSCSAG00000011514	SHQ1	66	57.846	Chlorocebus_sabaeus
ENSELUG00000003476	shq1	70	46.726	ENSCHOG00000003273	-	99	50.000	Choloepus_hoffmanni
ENSELUG00000003476	shq1	98	51.057	ENSCPBG00000006441	SHQ1	99	49.670	Chrysemys_picta_bellii
ENSELUG00000003476	shq1	81	39.896	ENSCING00000008013	-	85	42.455	Ciona_intestinalis
ENSELUG00000003476	shq1	81	37.760	ENSCSAVG00000002332	-	88	40.360	Ciona_savignyi
ENSELUG00000003476	shq1	89	52.143	ENSCANG00000039295	SHQ1	72	60.628	Colobus_angolensis_palliatus
ENSELUG00000003476	shq1	81	57.545	ENSCGRG00001012583	Shq1	73	60.145	Cricetulus_griseus_chok1gshd
ENSELUG00000003476	shq1	81	57.545	ENSCGRG00000009849	Shq1	73	60.145	Cricetulus_griseus_crigri
ENSELUG00000003476	shq1	98	60.784	ENSCSEG00000007829	shq1	97	59.770	Cynoglossus_semilaevis
ENSELUG00000003476	shq1	99	60.302	ENSCVAG00000020049	shq1	98	59.191	Cyprinodon_variegatus
ENSELUG00000003476	shq1	98	58.491	ENSDARG00000058522	shq1	69	72.906	Danio_rerio
ENSELUG00000003476	shq1	90	54.433	ENSDNOG00000033937	SHQ1	72	62.019	Dasypus_novemcinctus
ENSELUG00000003476	shq1	81	53.351	ENSETEG00000005766	SHQ1	72	53.623	Echinops_telfairi
ENSELUG00000003476	shq1	63	47.467	ENSEBUG00000005445	shq1	72	49.062	Eptatretus_burgeri
ENSELUG00000003476	shq1	88	54.281	ENSEASG00005002237	SHQ1	95	52.641	Equus_asinus_asinus
ENSELUG00000003476	shq1	94	52.577	ENSECAG00000015673	SHQ1	70	61.298	Equus_caballus
ENSELUG00000003476	shq1	81	59.278	ENSEEUG00000010568	SHQ1	72	62.260	Erinaceus_europaeus
ENSELUG00000003476	shq1	89	53.571	ENSFCAG00000012781	SHQ1	73	61.298	Felis_catus
ENSELUG00000003476	shq1	98	52.512	ENSFALG00000013428	SHQ1	99	51.159	Ficedula_albicollis
ENSELUG00000003476	shq1	81	58.656	ENSFDAG00000005595	SHQ1	64	60.145	Fukomys_damarensis
ENSELUG00000003476	shq1	98	58.557	ENSFHEG00000017552	shq1	99	57.496	Fundulus_heteroclitus
ENSELUG00000003476	shq1	81	67.368	ENSGMOG00000007350	shq1	100	72.165	Gadus_morhua
ENSELUG00000003476	shq1	98	51.220	ENSGALG00000007798	SHQ1	99	50.000	Gallus_gallus
ENSELUG00000003476	shq1	81	70.000	ENSGACG00000011797	shq1	100	74.742	Gasterosteus_aculeatus
ENSELUG00000003476	shq1	93	52.203	ENSGGOG00000034818	SHQ1	71	60.628	Gorilla_gorilla
ENSELUG00000003476	shq1	99	60.720	ENSHBUG00000010857	shq1	98	61.111	Haplochromis_burtoni
ENSELUG00000003476	shq1	81	57.990	ENSHGLG00000003637	SHQ1	64	59.662	Heterocephalus_glaber_female
ENSELUG00000003476	shq1	81	57.990	ENSHGLG00100011957	SHQ1	64	59.662	Heterocephalus_glaber_male
ENSELUG00000003476	shq1	97	59.391	ENSHCOG00000010799	shq1	69	70.690	Hippocampus_comes
ENSELUG00000003476	shq1	81	66.754	ENSIPUG00000001247	shq1	70	69.853	Ictalurus_punctatus
ENSELUG00000003476	shq1	81	57.474	ENSSTOG00000010043	SHQ1	76	58.810	Ictidomys_tridecemlineatus
ENSELUG00000003476	shq1	81	58.824	ENSJJAG00000017611	Shq1	55	81.818	Jaculus_jaculus
ENSELUG00000003476	shq1	99	62.687	ENSKMAG00000004457	shq1	98	63.283	Kryptolebias_marmoratus
ENSELUG00000003476	shq1	81	62.532	ENSLACG00000014243	SHQ1	62	65.217	Latimeria_chalumnae
ENSELUG00000003476	shq1	99	57.457	ENSLOCG00000009970	shq1	99	60.522	Lepisosteus_oculatus
ENSELUG00000003476	shq1	89	53.214	ENSMFAG00000039148	SHQ1	71	61.353	Macaca_fascicularis
ENSELUG00000003476	shq1	93	38.095	ENSMFAG00000037396	-	69	40.786	Macaca_fascicularis
ENSELUG00000003476	shq1	81	51.556	ENSMMUG00000009571	SHQ1	66	59.836	Macaca_mulatta
ENSELUG00000003476	shq1	93	38.095	ENSMMUG00000021761	-	69	40.786	Macaca_mulatta
ENSELUG00000003476	shq1	89	53.214	ENSMNEG00000032667	SHQ1	71	61.353	Macaca_nemestrina
ENSELUG00000003476	shq1	92	51.473	ENSMLEG00000038493	SHQ1	71	60.870	Mandrillus_leucophaeus
ENSELUG00000003476	shq1	98	63.072	ENSMAMG00000023432	shq1	94	59.571	Mastacembelus_armatus
ENSELUG00000003476	shq1	99	61.349	ENSMZEG00005008649	shq1	98	61.279	Maylandia_zebra
ENSELUG00000003476	shq1	98	52.961	ENSMGAG00000009640	SHQ1	99	51.256	Meleagris_gallopavo
ENSELUG00000003476	shq1	81	58.056	ENSMAUG00000022030	Shq1	56	78.788	Mesocricetus_auratus
ENSELUG00000003476	shq1	89	52.120	ENSMICG00000009224	SHQ1	71	59.472	Microcebus_murinus
ENSELUG00000003476	shq1	81	59.079	ENSMOCG00000017836	Shq1	73	61.871	Microtus_ochrogaster
ENSELUG00000003476	shq1	98	59.204	ENSMMOG00000010569	shq1	99	61.269	Mola_mola
ENSELUG00000003476	shq1	88	51.381	ENSMODG00000003926	SHQ1	75	59.036	Monodelphis_domestica
ENSELUG00000003476	shq1	98	64.824	ENSMALG00000008870	shq1	98	64.298	Monopterus_albus
ENSELUG00000003476	shq1	81	58.247	MGP_CAROLIEiJ_G0028689	Shq1	73	60.870	Mus_caroli
ENSELUG00000003476	shq1	81	58.763	ENSMUSG00000035378	Shq1	55	81.818	Mus_musculus
ENSELUG00000003476	shq1	81	59.278	MGP_PahariEiJ_G0022440	Shq1	73	61.836	Mus_pahari
ENSELUG00000003476	shq1	81	58.763	MGP_SPRETEiJ_G0029717	Shq1	55	81.818	Mus_spretus
ENSELUG00000003476	shq1	89	54.464	ENSMPUG00000017006	SHQ1	70	61.538	Mustela_putorius_furo
ENSELUG00000003476	shq1	82	51.277	ENSMLUG00000013539	SHQ1	70	59.350	Myotis_lucifugus
ENSELUG00000003476	shq1	81	52.770	ENSNGAG00000023317	Shq1	72	55.012	Nannospalax_galili
ENSELUG00000003476	shq1	84	58.221	ENSNBRG00000024004	shq1	97	57.594	Neolamprologus_brichardi
ENSELUG00000003476	shq1	93	50.512	ENSNLEG00000002731	SHQ1	71	60.386	Nomascus_leucogenys
ENSELUG00000003476	shq1	72	58.333	ENSMEUG00000009350	-	67	58.333	Notamacropus_eugenii
ENSELUG00000003476	shq1	57	62.745	ENSOPRG00000013963	-	73	63.793	Ochotona_princeps
ENSELUG00000003476	shq1	81	57.881	ENSODEG00000009192	SHQ1	59	78.788	Octodon_degus
ENSELUG00000003476	shq1	99	60.920	ENSONIG00000020264	shq1	98	61.616	Oreochromis_niloticus
ENSELUG00000003476	shq1	93	50.514	ENSOCUG00000016695	SHQ1	71	60.000	Oryctolagus_cuniculus
ENSELUG00000003476	shq1	81	68.158	ENSORLG00000023538	shq1	74	71.990	Oryzias_latipes
ENSELUG00000003476	shq1	81	68.684	ENSORLG00020003697	shq1	74	72.236	Oryzias_latipes_hni
ENSELUG00000003476	shq1	81	68.421	ENSORLG00015021040	shq1	74	71.499	Oryzias_latipes_hsok
ENSELUG00000003476	shq1	81	68.421	ENSOMEG00000001225	shq1	74	71.253	Oryzias_melastigma
ENSELUG00000003476	shq1	90	51.045	ENSOGAG00000003898	SHQ1	73	58.993	Otolemur_garnettii
ENSELUG00000003476	shq1	89	53.086	ENSOARG00000009547	SHQ1	67	57.506	Ovis_aries
ENSELUG00000003476	shq1	93	51.877	ENSPPAG00000027714	SHQ1	71	60.628	Pan_paniscus
ENSELUG00000003476	shq1	93	39.410	ENSPPAG00000043263	-	69	42.336	Pan_paniscus
ENSELUG00000003476	shq1	89	53.251	ENSPPRG00000004769	SHQ1	72	61.298	Panthera_pardus
ENSELUG00000003476	shq1	89	51.356	ENSPTIG00000011478	SHQ1	71	58.191	Panthera_tigris_altaica
ENSELUG00000003476	shq1	93	38.957	ENSPTRG00000048303	-	68	41.707	Pan_troglodytes
ENSELUG00000003476	shq1	93	52.041	ENSPTRG00000015106	SHQ1	71	60.628	Pan_troglodytes
ENSELUG00000003476	shq1	92	51.910	ENSPANG00000002881	SHQ1	71	61.594	Papio_anubis
ENSELUG00000003476	shq1	98	60.720	ENSPKIG00000021517	shq1	97	60.243	Paramormyrops_kingsleyae
ENSELUG00000003476	shq1	98	48.889	ENSPSIG00000005536	SHQ1	68	62.169	Pelodiscus_sinensis
ENSELUG00000003476	shq1	99	56.931	ENSPMGG00000008838	shq1	98	56.155	Periophthalmus_magnuspinnatus
ENSELUG00000003476	shq1	92	52.595	ENSPEMG00000000251	Shq1	80	56.769	Peromyscus_maniculatus_bairdii
ENSELUG00000003476	shq1	81	56.122	ENSPMAG00000005372	shq1	93	57.895	Petromyzon_marinus
ENSELUG00000003476	shq1	89	62.782	ENSPFOG00000003118	shq1	97	64.151	Poecilia_formosa
ENSELUG00000003476	shq1	74	59.594	ENSPMEG00000011076	shq1	97	61.048	Poecilia_mexicana
ENSELUG00000003476	shq1	81	61.123	ENSPREG00000000591	shq1	92	61.331	Poecilia_reticulata
ENSELUG00000003476	shq1	93	51.365	ENSPPYG00000013717	SHQ1	71	60.628	Pongo_abelii
ENSELUG00000003476	shq1	81	58.505	ENSPCAG00000009035	SHQ1	73	61.538	Procavia_capensis
ENSELUG00000003476	shq1	81	57.801	ENSPCOG00000008415	SHQ1	71	60.192	Propithecus_coquereli
ENSELUG00000003476	shq1	90	54.064	ENSPVAG00000017392	SHQ1	72	61.058	Pteropus_vampyrus
ENSELUG00000003476	shq1	99	61.779	ENSPNYG00000003878	shq1	98	61.513	Pundamilia_nyererei
ENSELUG00000003476	shq1	97	61.345	ENSPNAG00000026840	shq1	97	61.953	Pygocentrus_nattereri
ENSELUG00000003476	shq1	81	58.824	ENSRNOG00000005433	Shq1	69	61.391	Rattus_norvegicus
ENSELUG00000003476	shq1	81	59.626	ENSRBIG00000026280	SHQ1	71	59.113	Rhinopithecus_bieti
ENSELUG00000003476	shq1	89	52.847	ENSRROG00000034126	SHQ1	72	61.353	Rhinopithecus_roxellana
ENSELUG00000003476	shq1	81	52.591	ENSSBOG00000021038	SHQ1	69	53.846	Saimiri_boliviensis_boliviensis
ENSELUG00000003476	shq1	88	51.381	ENSSHAG00000015077	SHQ1	74	59.277	Sarcophilus_harrisii
ENSELUG00000003476	shq1	98	61.395	ENSSFOG00015016241	shq1	74	75.062	Scleropages_formosus
ENSELUG00000003476	shq1	98	64.745	ENSSMAG00000016151	shq1	98	64.725	Scophthalmus_maximus
ENSELUG00000003476	shq1	98	63.115	ENSSDUG00000011986	shq1	98	64.333	Seriola_dumerili
ENSELUG00000003476	shq1	98	63.516	ENSSLDG00000013908	shq1	98	64.034	Seriola_lalandi_dorsalis
ENSELUG00000003476	shq1	89	46.266	ENSSARG00000007119	SHQ1	60	58.529	Sorex_araneus
ENSELUG00000003476	shq1	82	46.845	ENSSPUG00000011526	-	61	58.104	Sphenodon_punctatus
ENSELUG00000003476	shq1	90	52.473	ENSSSCG00000011518	SHQ1	72	60.432	Sus_scrofa
ENSELUG00000003476	shq1	92	52.931	ENSTGUG00000009933	SHQ1	72	61.814	Taeniopygia_guttata
ENSELUG00000003476	shq1	99	59.068	ENSTRUG00000009446	shq1	98	60.702	Takifugu_rubripes
ENSELUG00000003476	shq1	81	63.542	ENSTNIG00000007354	shq1	90	68.293	Tetraodon_nigroviridis
ENSELUG00000003476	shq1	74	74.468	ENSTBEG00000011295	SHQ1	52	74.468	Tupaia_belangeri
ENSELUG00000003476	shq1	90	52.028	ENSTTRG00000005320	SHQ1	71	60.437	Tursiops_truncatus
ENSELUG00000003476	shq1	89	55.009	ENSUMAG00000024031	SHQ1	71	62.222	Ursus_maritimus
ENSELUG00000003476	shq1	83	45.161	ENSVPAG00000004880	SHQ1	69	51.771	Vicugna_pacos
ENSELUG00000003476	shq1	89	53.476	ENSVVUG00000013906	SHQ1	72	61.538	Vulpes_vulpes
ENSELUG00000003476	shq1	81	58.684	ENSXETG00000032215	shq1	67	60.732	Xenopus_tropicalis