EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000003521 (Gene tree)
Gene ID: 105019790
Gene Symbol: pcbp3
Alias: -
Full Name: poly(rC)-binding protein 3
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 24302 bases
Position: chrLG22:13247211-13271512
Accession: 105019790
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000002150	KH_1	PF00013.29	1.8e-54	1	3
ENSELUP00000002150	KH_1	PF00013.29	1.8e-54	2	3
ENSELUP00000002150	KH_1	PF00013.29	1.8e-54	3	3
ENSELUP00000002162	KH_1	PF00013.29	1.8e-54	1	3
ENSELUP00000002162	KH_1	PF00013.29	1.8e-54	2	3
ENSELUP00000002162	KH_1	PF00013.29	1.8e-54	3	3
ENSELUP00000027323	KH_1	PF00013.29	1.8e-54	1	3
ENSELUP00000027323	KH_1	PF00013.29	1.8e-54	2	3
ENSELUP00000027323	KH_1	PF00013.29	1.8e-54	3	3
ENSELUP00000027315	KH_1	PF00013.29	1.9e-47	1	3
ENSELUP00000027315	KH_1	PF00013.29	1.9e-47	2	3
ENSELUP00000027315	KH_1	PF00013.29	1.9e-47	3	3
ENSELUP00000002150	KH_2	PF07650.17	7.5e-14	1	1
ENSELUP00000002162	KH_2	PF07650.17	7.5e-14	1	1
ENSELUP00000027323	KH_2	PF07650.17	7.5e-14	1	1
ENSELUP00000027315	KH_2	PF07650.17	9.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000016191	-	4489	XM_013139846	ENSELUP00000002162	353 (aa)	XP_012995300	UPI000661CFB6
ENSELUT00000016202	-	4399	XM_013139845	ENSELUP00000002150	353 (aa)	XP_012995299	UPI000661CFB6
ENSELUT00000016252	-	930	-	ENSELUP00000027315	309 (aa)	-	-
ENSELUT00000016228	-	4903	XM_013139847	ENSELUP00000027323	353 (aa)	XP_012995301	UPI000661CFB6

Gene Model

Click here to download ENSELUG00000003521's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000003521's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000003521	pcbp3	98	63.352	ENSELUG00000018204	pcbp4	91	63.352
ENSELUG00000003521	pcbp3	59	39.062	ENSELUG00000016310	khsrp	59	39.062
ENSELUG00000003521	pcbp3	69	38.462	ENSELUG00000008445	-	60	38.462
ENSELUG00000003521	pcbp3	59	37.879	ENSELUG00000007990	fubp1	53	35.616
ENSELUG00000003521	pcbp3	87	37.008	ENSELUG00000010676	igf2bp2a	60	41.818
ENSELUG00000003521	pcbp3	94	74.405	ENSELUG00000014427	pcbp2	96	74.405
ENSELUG00000003521	pcbp3	93	74.751	ENSELUG00000010754	PCBP2	96	73.156
ENSELUG00000003521	pcbp3	93	39.062	ENSELUG00000013808	fubp3	66	39.062
ENSELUG00000003521	pcbp3	100	90.935	ENSELUG00000001560	-	100	83.014
ENSELUG00000003521	pcbp3	70	52.727	ENSELUG00000002820	hnrnpk	55	53.968
ENSELUG00000003521	pcbp3	93	64.688	ENSELUG00000001870	-	71	64.688
ENSELUG00000003521	pcbp3	88	36.508	ENSELUG00000009949	-	63	36.508
ENSELUG00000003521	pcbp3	92	38.596	ENSELUG00000012346	-	53	39.706
ENSELUG00000003521	pcbp3	92	38.596	ENSELUG00000017375	nova1	85	30.189
ENSELUG00000003521	pcbp3	93	69.486	ENSELUG00000019784	zgc:110045	71	69.486
ENSELUG00000003521	pcbp3	95	31.884	ENSELUG00000005947	igf2bp3	63	31.884
ENSELUG00000003521	pcbp3	70	54.545	ENSELUG00000004017	hnrpkl	56	47.297

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000003521	pcbp3	97	91.857	ENSAPOG00000020003	pcbp3	87	91.857	Acanthochromis_polyacanthus
ENSELUG00000003521	pcbp3	100	90.935	ENSAPOG00000016582	-	100	90.935	Acanthochromis_polyacanthus
ENSELUG00000003521	pcbp3	93	87.834	ENSAMEG00000001697	-	95	87.834	Ailuropoda_melanoleuca
ENSELUG00000003521	pcbp3	98	87.578	ENSACIG00000002739	-	97	88.724	Amphilophus_citrinellus
ENSELUG00000003521	pcbp3	100	95.184	ENSACIG00000010933	pcbp3	100	95.184	Amphilophus_citrinellus
ENSELUG00000003521	pcbp3	91	86.275	ENSAOCG00000007806	-	98	87.500	Amphiprion_ocellaris
ENSELUG00000003521	pcbp3	97	89.524	ENSAOCG00000008592	-	98	91.071	Amphiprion_ocellaris
ENSELUG00000003521	pcbp3	98	89.241	ENSAPEG00000005209	-	98	89.241	Amphiprion_percula
ENSELUG00000003521	pcbp3	100	98.023	ENSAPEG00000008011	pcbp3	100	98.023	Amphiprion_percula
ENSELUG00000003521	pcbp3	95	95.536	ENSATEG00000015787	-	100	95.536	Anabas_testudineus
ENSELUG00000003521	pcbp3	98	90.415	ENSATEG00000009833	-	98	90.415	Anabas_testudineus
ENSELUG00000003521	pcbp3	97	78.474	ENSAPLG00000008951	-	82	78.474	Anas_platyrhynchos
ENSELUG00000003521	pcbp3	93	86.471	ENSAPLG00000002975	-	95	86.471	Anas_platyrhynchos
ENSELUG00000003521	pcbp3	93	87.462	ENSACAG00000009819	-	94	87.462	Anolis_carolinensis
ENSELUG00000003521	pcbp3	93	91.618	ENSACAG00000004607	-	96	91.618	Anolis_carolinensis
ENSELUG00000003521	pcbp3	91	87.823	ENSANAG00000030702	-	97	87.983	Aotus_nancymaae
ENSELUG00000003521	pcbp3	100	97.175	ENSACLG00000011835	pcbp3	100	97.175	Astatotilapia_calliptera
ENSELUG00000003521	pcbp3	100	90.368	ENSACLG00000003801	-	100	90.368	Astatotilapia_calliptera
ENSELUG00000003521	pcbp3	96	88.889	ENSAMXG00000013588	-	100	88.889	Astyanax_mexicanus
ENSELUG00000003521	pcbp3	100	96.884	ENSAMXG00000003440	pcbp3	100	96.884	Astyanax_mexicanus
ENSELUG00000003521	pcbp3	93	66.875	ENSAMXG00000001760	zgc:110045	71	66.875	Astyanax_mexicanus
ENSELUG00000003521	pcbp3	90	88.843	ENSCAFG00020019472	-	86	88.843	Canis_lupus_dingo
ENSELUG00000003521	pcbp3	93	89.602	ENSCSAG00000007440	-	86	89.602	Chlorocebus_sabaeus
ENSELUG00000003521	pcbp3	97	88.095	ENSCPBG00000000733	-	72	88.095	Chrysemys_picta_bellii
ENSELUG00000003521	pcbp3	96	87.500	ENSCPBG00000012151	-	95	86.297	Chrysemys_picta_bellii
ENSELUG00000003521	pcbp3	98	74.777	ENSCSEG00000016984	-	98	74.777	Cynoglossus_semilaevis
ENSELUG00000003521	pcbp3	97	90.228	ENSCSEG00000000822	pcbp3	99	90.228	Cynoglossus_semilaevis
ENSELUG00000003521	pcbp3	100	97.740	ENSCVAG00000014482	pcbp3	100	97.740	Cyprinodon_variegatus
ENSELUG00000003521	pcbp3	100	90.368	ENSCVAG00000005262	-	100	90.368	Cyprinodon_variegatus
ENSELUG00000003521	pcbp3	100	97.167	ENSDARG00000054378	pcbp3	100	97.167	Danio_rerio
ENSELUG00000003521	pcbp3	94	76.299	ENSETEG00000015988	-	96	76.299	Echinops_telfairi
ENSELUG00000003521	pcbp3	72	71.245	ENSEBUG00000005495	pcbp3	70	71.245	Eptatretus_burgeri
ENSELUG00000003521	pcbp3	94	75.000	ENSEBUG00000007485	-	92	78.539	Eptatretus_burgeri
ENSELUG00000003521	pcbp3	91	68.942	ENSEBUG00000016192	pcbp3	99	69.343	Eptatretus_burgeri
ENSELUG00000003521	pcbp3	93	89.297	ENSFALG00000003949	-	95	89.297	Ficedula_albicollis
ENSELUG00000003521	pcbp3	97	78.474	ENSFALG00000004411	-	77	78.474	Ficedula_albicollis
ENSELUG00000003521	pcbp3	98	89.241	ENSFHEG00000006539	-	98	89.241	Fundulus_heteroclitus
ENSELUG00000003521	pcbp3	100	88.959	ENSFHEG00000016615	pcbp3	98	88.959	Fundulus_heteroclitus
ENSELUG00000003521	pcbp3	99	75.072	ENSGMOG00000011992	pcbp3	99	75.072	Gadus_morhua
ENSELUG00000003521	pcbp3	95	66.479	ENSGMOG00000008611	-	100	66.479	Gadus_morhua
ENSELUG00000003521	pcbp3	94	86.145	ENSGALG00000013155	-	97	84.923	Gallus_gallus
ENSELUG00000003521	pcbp3	93	88.728	ENSGALG00000004394	-	98	89.674	Gallus_gallus
ENSELUG00000003521	pcbp3	95	93.750	ENSGAFG00000011430	pcbp3	96	93.750	Gambusia_affinis
ENSELUG00000003521	pcbp3	100	90.368	ENSGAFG00000010274	-	100	90.368	Gambusia_affinis
ENSELUG00000003521	pcbp3	97	84.036	ENSGACG00000002266	-	97	84.270	Gasterosteus_aculeatus
ENSELUG00000003521	pcbp3	95	82.254	ENSGACG00000014955	-	97	82.254	Gasterosteus_aculeatus
ENSELUG00000003521	pcbp3	75	88.208	ENSGAGG00000006956	-	85	88.208	Gopherus_agassizii
ENSELUG00000003521	pcbp3	94	81.298	ENSGAGG00000000271	-	100	84.015	Gopherus_agassizii
ENSELUG00000003521	pcbp3	100	90.368	ENSHBUG00000021782	-	100	90.368	Haplochromis_burtoni
ENSELUG00000003521	pcbp3	100	97.175	ENSHBUG00000010697	pcbp3	100	97.175	Haplochromis_burtoni
ENSELUG00000003521	pcbp3	100	98.017	ENSHCOG00000017868	pcbp3	100	98.017	Hippocampus_comes
ENSELUG00000003521	pcbp3	98	83.648	ENSHCOG00000006067	-	97	85.460	Hippocampus_comes
ENSELUG00000003521	pcbp3	95	95.846	ENSIPUG00000006238	pcbp3	97	95.846	Ictalurus_punctatus
ENSELUG00000003521	pcbp3	100	98.023	ENSKMAG00000003046	pcbp3	100	98.023	Kryptolebias_marmoratus
ENSELUG00000003521	pcbp3	100	89.518	ENSKMAG00000018530	-	100	89.518	Kryptolebias_marmoratus
ENSELUG00000003521	pcbp3	98	89.172	ENSLBEG00000006201	pcbp3	97	89.172	Labrus_bergylta
ENSELUG00000003521	pcbp3	100	77.337	ENSLBEG00000006542	-	100	79.603	Labrus_bergylta
ENSELUG00000003521	pcbp3	97	78.571	ENSLACG00000010804	zgc:110045	76	78.571	Latimeria_chalumnae
ENSELUG00000003521	pcbp3	96	86.501	ENSLACG00000010386	pcbp3	76	86.501	Latimeria_chalumnae
ENSELUG00000003521	pcbp3	93	86.544	ENSLOCG00000005058	zgc:110045	79	86.544	Lepisosteus_oculatus
ENSELUG00000003521	pcbp3	93	96.636	ENSLOCG00000009369	pcbp3	95	96.636	Lepisosteus_oculatus
ENSELUG00000003521	pcbp3	97	91.262	ENSMAMG00000022336	pcbp3	94	91.262	Mastacembelus_armatus
ENSELUG00000003521	pcbp3	98	89.137	ENSMAMG00000011620	-	98	89.137	Mastacembelus_armatus
ENSELUG00000003521	pcbp3	100	86.969	ENSMZEG00005014882	-	100	87.079	Maylandia_zebra
ENSELUG00000003521	pcbp3	100	94.901	ENSMZEG00005008993	pcbp3	100	94.901	Maylandia_zebra
ENSELUG00000003521	pcbp3	93	80.980	ENSMGAG00000001883	-	96	80.980	Meleagris_gallopavo
ENSELUG00000003521	pcbp3	99	77.540	ENSMGAG00000006794	-	78	77.540	Meleagris_gallopavo
ENSELUG00000003521	pcbp3	97	87.066	ENSMMOG00000000730	pcbp3	88	87.574	Mola_mola
ENSELUG00000003521	pcbp3	98	90.645	ENSMMOG00000005216	-	98	90.645	Mola_mola
ENSELUG00000003521	pcbp3	71	86.916	ENSMODG00000027884	-	93	86.916	Monodelphis_domestica
ENSELUG00000003521	pcbp3	100	95.751	ENSMALG00000000691	pcbp3	100	95.751	Monopterus_albus
ENSELUG00000003521	pcbp3	94	80.122	ENSMPUG00000001779	-	88	80.122	Mustela_putorius_furo
ENSELUG00000003521	pcbp3	100	94.901	ENSNBRG00000016409	-	100	94.901	Neolamprologus_brichardi
ENSELUG00000003521	pcbp3	100	89.415	ENSNBRG00000016714	-	100	89.415	Neolamprologus_brichardi
ENSELUG00000003521	pcbp3	92	88.372	ENSOPRG00000003431	-	98	88.372	Ochotona_princeps
ENSELUG00000003521	pcbp3	95	92.394	ENSONIG00000012122	-	98	92.394	Oreochromis_niloticus
ENSELUG00000003521	pcbp3	98	88.365	ENSONIG00000004611	-	97	89.614	Oreochromis_niloticus
ENSELUG00000003521	pcbp3	93	88.991	ENSOCUG00000002696	-	86	88.991	Oryctolagus_cuniculus
ENSELUG00000003521	pcbp3	95	91.071	ENSORLG00000000059	pcbp3	100	91.071	Oryzias_latipes
ENSELUG00000003521	pcbp3	99	89.773	ENSORLG00000022739	-	99	89.773	Oryzias_latipes
ENSELUG00000003521	pcbp3	99	89.489	ENSORLG00020006124	-	99	89.489	Oryzias_latipes_hni
ENSELUG00000003521	pcbp3	95	91.071	ENSORLG00020012671	pcbp3	97	91.071	Oryzias_latipes_hni
ENSELUG00000003521	pcbp3	99	89.773	ENSORLG00015008051	-	99	89.773	Oryzias_latipes_hsok
ENSELUG00000003521	pcbp3	95	91.071	ENSORLG00015000429	pcbp3	97	91.071	Oryzias_latipes_hsok
ENSELUG00000003521	pcbp3	98	90.323	ENSOMEG00000020162	-	98	90.323	Oryzias_melastigma
ENSELUG00000003521	pcbp3	90	90.164	ENSOMEG00000020811	pcbp3	96	92.143	Oryzias_melastigma
ENSELUG00000003521	pcbp3	93	83.003	ENSOGAG00000008044	-	96	83.003	Otolemur_garnettii
ENSELUG00000003521	pcbp3	75	80.000	ENSPKIG00000020913	-	91	80.000	Paramormyrops_kingsleyae
ENSELUG00000003521	pcbp3	100	89.802	ENSPKIG00000019329	pcbp3	100	89.802	Paramormyrops_kingsleyae
ENSELUG00000003521	pcbp3	94	81.298	ENSPSIG00000008350	-	72	81.298	Pelodiscus_sinensis
ENSELUG00000003521	pcbp3	93	77.551	ENSPSIG00000014970	-	95	78.134	Pelodiscus_sinensis
ENSELUG00000003521	pcbp3	100	97.167	ENSPMGG00000022383	pcbp3	100	97.167	Periophthalmus_magnuspinnatus
ENSELUG00000003521	pcbp3	94	69.903	ENSPMAG00000004551	pcbp3	89	69.552	Petromyzon_marinus
ENSELUG00000003521	pcbp3	90	86.096	ENSPMAG00000004637	-	97	90.374	Petromyzon_marinus
ENSELUG00000003521	pcbp3	93	96.330	ENSPCIG00000028092	-	95	96.330	Phascolarctos_cinereus
ENSELUG00000003521	pcbp3	100	82.587	ENSPLAG00000011449	pcbp3	100	82.587	Poecilia_latipinna
ENSELUG00000003521	pcbp3	94	88.424	ENSPLAG00000004074	-	89	88.424	Poecilia_latipinna
ENSELUG00000003521	pcbp3	100	97.191	ENSPMEG00000021239	pcbp3	100	97.191	Poecilia_mexicana
ENSELUG00000003521	pcbp3	100	88.102	ENSPMEG00000006653	-	100	88.102	Poecilia_mexicana
ENSELUG00000003521	pcbp3	98	90.645	ENSPREG00000020585	-	98	90.645	Poecilia_reticulata
ENSELUG00000003521	pcbp3	97	89.644	ENSPREG00000015736	pcbp3	99	89.644	Poecilia_reticulata
ENSELUG00000003521	pcbp3	98	90.645	ENSPNYG00000013205	-	98	90.645	Pundamilia_nyererei
ENSELUG00000003521	pcbp3	97	89.206	ENSPNYG00000012326	pcbp3	96	89.206	Pundamilia_nyererei
ENSELUG00000003521	pcbp3	98	88.994	ENSPNAG00000015104	pcbp3	97	90.208	Pygocentrus_nattereri
ENSELUG00000003521	pcbp3	100	94.068	ENSPNAG00000008541	-	100	94.068	Pygocentrus_nattereri
ENSELUG00000003521	pcbp3	93	89.602	ENSRNOG00000001245	Pcbp3	95	89.602	Rattus_norvegicus
ENSELUG00000003521	pcbp3	93	80.168	ENSRBIG00000028177	-	96	80.168	Rhinopithecus_bieti
ENSELUG00000003521	pcbp3	95	84.123	ENSSHAG00000007890	-	96	84.401	Sarcophilus_harrisii
ENSELUG00000003521	pcbp3	94	81.908	ENSSFOG00015007118	-	93	81.908	Scleropages_formosus
ENSELUG00000003521	pcbp3	100	94.618	ENSSFOG00015014706	pcbp3	100	94.618	Scleropages_formosus
ENSELUG00000003521	pcbp3	100	90.368	ENSSFOG00015010205	pcbp3	100	94.345	Scleropages_formosus
ENSELUG00000003521	pcbp3	97	91.857	ENSSMAG00000011929	pcbp3	98	91.857	Scophthalmus_maximus
ENSELUG00000003521	pcbp3	100	90.085	ENSSMAG00000003135	-	100	90.085	Scophthalmus_maximus
ENSELUG00000003521	pcbp3	95	95.252	ENSSDUG00000011608	pcbp3	99	95.252	Seriola_dumerili
ENSELUG00000003521	pcbp3	100	89.235	ENSSDUG00000008502	-	100	89.235	Seriola_dumerili
ENSELUG00000003521	pcbp3	95	95.252	ENSSLDG00000008518	pcbp3	99	95.252	Seriola_lalandi_dorsalis
ENSELUG00000003521	pcbp3	100	90.935	ENSSLDG00000020161	-	100	90.935	Seriola_lalandi_dorsalis
ENSELUG00000003521	pcbp3	90	85.517	ENSSPUG00000013214	-	91	85.517	Sphenodon_punctatus
ENSELUG00000003521	pcbp3	91	86.275	ENSSPAG00000004190	-	98	87.500	Stegastes_partitus
ENSELUG00000003521	pcbp3	100	84.986	ENSSPAG00000023341	-	100	84.986	Stegastes_partitus
ENSELUG00000003521	pcbp3	94	80.793	ENSTGUG00000003316	-	96	80.793	Taeniopygia_guttata
ENSELUG00000003521	pcbp3	94	82.792	ENSTGUG00000008158	-	96	82.792	Taeniopygia_guttata
ENSELUG00000003521	pcbp3	91	90.066	ENSTRUG00000006280	-	89	91.519	Takifugu_rubripes
ENSELUG00000003521	pcbp3	100	91.501	ENSTRUG00000013604	pcbp3	100	91.501	Takifugu_rubripes
ENSELUG00000003521	pcbp3	93	89.017	ENSTTRG00000015075	-	96	89.017	Tursiops_truncatus
ENSELUG00000003521	pcbp3	95	77.337	ENSXETG00000010491	pcbp2	77	77.337	Xenopus_tropicalis
ENSELUG00000003521	pcbp3	93	83.815	ENSXETG00000011483	pcbp1	95	83.815	Xenopus_tropicalis
ENSELUG00000003521	pcbp3	100	97.191	ENSXCOG00000020481	pcbp3	100	97.191	Xiphophorus_couchianus
ENSELUG00000003521	pcbp3	100	98.023	ENSXMAG00000008175	pcbp3	100	98.023	Xiphophorus_maculatus
ENSELUG00000003521	pcbp3	100	90.652	ENSXMAG00000028711	-	100	90.652	Xiphophorus_maculatus