EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000003526 (Gene tree)
Gene ID: 105016470
Gene Symbol: pop1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 10399 bases
Position: chrLG16:26726905-26737303
Accession: 105016470
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000027340	POP1	PF06978.11	2.6e-36	1	2
ENSELUP00000027340	POP1	PF06978.11	2.6e-36	2	2
ENSELUP00000027340	POPLD	PF08170.12	6.4e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000016181	-	4738	XM_020054741	ENSELUP00000027340	958 (aa)	XP_019910300	UPI0005775BB8

Gene Model

Click here to download ENSELUG00000003526's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03008	Ribosome biogenesis in eukaryotes	KEGG
els03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000003526's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000003526	pop1	100	47.104	ENSG00000104356	POP1	100	47.533	Homo_sapiens
ENSELUG00000003526	pop1	100	65.000	ENSAPOG00000008198	pop1	100	64.400	Acanthochromis_polyacanthus
ENSELUG00000003526	pop1	99	47.977	ENSAMEG00000000556	POP1	99	47.519	Ailuropoda_melanoleuca
ENSELUG00000003526	pop1	100	60.988	ENSACIG00000004169	POP1	100	60.383	Amphilophus_citrinellus
ENSELUG00000003526	pop1	100	64.100	ENSAOCG00000010991	pop1	100	64.000	Amphiprion_ocellaris
ENSELUG00000003526	pop1	100	59.623	ENSAPEG00000007607	pop1	100	59.425	Amphiprion_percula
ENSELUG00000003526	pop1	100	63.718	ENSATEG00000024814	POP1	100	63.121	Anabas_testudineus
ENSELUG00000003526	pop1	93	48.952	ENSAPLG00000014418	POP1	99	49.211	Anas_platyrhynchos
ENSELUG00000003526	pop1	99	47.661	ENSACAG00000016083	POP1	100	47.495	Anolis_carolinensis
ENSELUG00000003526	pop1	87	55.848	ENSANAG00000026360	POP1	99	55.848	Aotus_nancymaae
ENSELUG00000003526	pop1	100	63.417	ENSACLG00000010951	pop1	100	63.216	Astatotilapia_calliptera
ENSELUG00000003526	pop1	99	59.109	ENSAMXG00000014483	POP1	99	59.050	Astyanax_mexicanus
ENSELUG00000003526	pop1	100	49.038	ENSBTAG00000012596	POP1	100	48.230	Bos_taurus
ENSELUG00000003526	pop1	62	32.319	WBGene00015486	C05D11.9	67	31.939	Caenorhabditis_elegans
ENSELUG00000003526	pop1	100	47.939	ENSCJAG00000015567	POP1	100	47.889	Callithrix_jacchus
ENSELUG00000003526	pop1	100	49.107	ENSCAFG00000000469	POP1	100	48.710	Canis_familiaris
ENSELUG00000003526	pop1	100	48.066	ENSCAFG00020026765	POP1	100	47.776	Canis_lupus_dingo
ENSELUG00000003526	pop1	94	52.362	ENSCHIG00000017066	POP1	100	48.552	Capra_hircus
ENSELUG00000003526	pop1	100	47.009	ENSTSYG00000003097	POP1	100	46.654	Carlito_syrichta
ENSELUG00000003526	pop1	99	45.717	ENSCAPG00000007251	POP1	99	45.717	Cavia_aperea
ENSELUG00000003526	pop1	99	46.957	ENSCPOG00000002901	POP1	99	46.860	Cavia_porcellus
ENSELUG00000003526	pop1	100	48.560	ENSCCAG00000018939	POP1	100	48.464	Cebus_capucinus
ENSELUG00000003526	pop1	100	47.198	ENSCATG00000040916	POP1	100	47.479	Cercocebus_atys
ENSELUG00000003526	pop1	100	46.794	ENSCLAG00000007208	POP1	97	46.699	Chinchilla_lanigera
ENSELUG00000003526	pop1	91	48.674	ENSCSAG00000012340	POP1	99	49.205	Chlorocebus_sabaeus
ENSELUG00000003526	pop1	96	46.334	ENSCHOG00000011432	POP1	98	46.279	Choloepus_hoffmanni
ENSELUG00000003526	pop1	100	49.121	ENSCPBG00000006373	POP1	100	49.020	Chrysemys_picta_bellii
ENSELUG00000003526	pop1	100	47.064	ENSCANG00000001647	POP1	100	47.343	Colobus_angolensis_palliatus
ENSELUG00000003526	pop1	100	47.328	ENSCGRG00001017308	Pop1	100	46.236	Cricetulus_griseus_chok1gshd
ENSELUG00000003526	pop1	100	45.139	ENSCGRG00000010824	Pop1	100	44.138	Cricetulus_griseus_crigri
ENSELUG00000003526	pop1	100	62.325	ENSCSEG00000008737	POP1	100	61.623	Cynoglossus_semilaevis
ENSELUG00000003526	pop1	100	60.971	ENSCVAG00000022248	pop1	100	60.768	Cyprinodon_variegatus
ENSELUG00000003526	pop1	54	55.253	ENSDARG00000102087	pop1	99	55.361	Danio_rerio
ENSELUG00000003526	pop1	100	45.472	ENSDNOG00000019974	POP1	100	44.944	Dasypus_novemcinctus
ENSELUG00000003526	pop1	100	41.834	ENSDORG00000015384	Pop1	100	40.625	Dipodomys_ordii
ENSELUG00000003526	pop1	91	31.917	FBgn0026702	l(1)G0045	97	31.699	Drosophila_melanogaster
ENSELUG00000003526	pop1	88	49.050	ENSETEG00000007839	POP1	88	48.359	Echinops_telfairi
ENSELUG00000003526	pop1	53	46.004	ENSEBUG00000009897	pop1	95	45.312	Eptatretus_burgeri
ENSELUG00000003526	pop1	100	47.939	ENSEASG00005003189	POP1	98	47.459	Equus_asinus_asinus
ENSELUG00000003526	pop1	100	47.592	ENSECAG00000024236	POP1	100	47.353	Equus_caballus
ENSELUG00000003526	pop1	50	75.325	ENSEEUG00000003050	-	53	78.788	Erinaceus_europaeus
ENSELUG00000003526	pop1	100	47.546	ENSFCAG00000002168	POP1	100	46.962	Felis_catus
ENSELUG00000003526	pop1	100	46.161	ENSFALG00000005711	POP1	100	46.079	Ficedula_albicollis
ENSELUG00000003526	pop1	100	47.323	ENSFDAG00000017068	POP1	100	47.031	Fukomys_damarensis
ENSELUG00000003526	pop1	100	62.083	ENSFHEG00000019518	pop1	100	61.982	Fundulus_heteroclitus
ENSELUG00000003526	pop1	99	57.758	ENSGMOG00000000659	POP1	100	57.746	Gadus_morhua
ENSELUG00000003526	pop1	100	60.508	ENSGAFG00000019770	POP1	100	59.695	Gambusia_affinis
ENSELUG00000003526	pop1	100	58.756	ENSGACG00000003499	pop1	100	58.565	Gasterosteus_aculeatus
ENSELUG00000003526	pop1	100	48.491	ENSGAGG00000011737	POP1	98	48.833	Gopherus_agassizii
ENSELUG00000003526	pop1	100	46.813	ENSGGOG00000003176	POP1	100	47.383	Gorilla_gorilla
ENSELUG00000003526	pop1	100	63.380	ENSHBUG00000021583	pop1	100	63.078	Haplochromis_burtoni
ENSELUG00000003526	pop1	100	46.648	ENSHGLG00000006029	POP1	100	46.080	Heterocephalus_glaber_female
ENSELUG00000003526	pop1	100	46.648	ENSHGLG00100016879	POP1	100	46.080	Heterocephalus_glaber_male
ENSELUG00000003526	pop1	100	57.696	ENSHCOG00000013888	pop1	100	57.100	Hippocampus_comes
ENSELUG00000003526	pop1	99	56.611	ENSIPUG00000018336	pop1	99	56.751	Ictalurus_punctatus
ENSELUG00000003526	pop1	100	47.363	ENSSTOG00000011455	POP1	97	46.827	Ictidomys_tridecemlineatus
ENSELUG00000003526	pop1	100	46.857	ENSJJAG00000013325	Pop1	100	46.237	Jaculus_jaculus
ENSELUG00000003526	pop1	100	62.641	ENSKMAG00000001346	POP1	100	61.914	Kryptolebias_marmoratus
ENSELUG00000003526	pop1	100	58.883	ENSLBEG00000024457	POP1	100	58.274	Labrus_bergylta
ENSELUG00000003526	pop1	95	49.949	ENSLACG00000012498	POP1	99	50.051	Latimeria_chalumnae
ENSELUG00000003526	pop1	100	56.513	ENSLOCG00000009817	POP1	100	56.219	Lepisosteus_oculatus
ENSELUG00000003526	pop1	100	48.711	ENSLAFG00000010770	POP1	100	48.713	Loxodonta_africana
ENSELUG00000003526	pop1	100	47.193	ENSMFAG00000000347	POP1	100	47.098	Macaca_fascicularis
ENSELUG00000003526	pop1	100	47.343	ENSMNEG00000036870	POP1	100	47.343	Macaca_nemestrina
ENSELUG00000003526	pop1	100	47.193	ENSMLEG00000034986	POP1	100	47.193	Mandrillus_leucophaeus
ENSELUG00000003526	pop1	100	63.463	ENSMAMG00000004040	pop1	100	62.863	Mastacembelus_armatus
ENSELUG00000003526	pop1	100	63.518	ENSMZEG00005025448	pop1	100	63.216	Maylandia_zebra
ENSELUG00000003526	pop1	100	45.943	ENSMGAG00000012167	POP1	100	45.817	Meleagris_gallopavo
ENSELUG00000003526	pop1	100	47.047	ENSMAUG00000017537	Pop1	100	46.050	Mesocricetus_auratus
ENSELUG00000003526	pop1	100	47.885	ENSMICG00000004361	POP1	100	48.023	Microcebus_murinus
ENSELUG00000003526	pop1	100	46.827	ENSMOCG00000006356	Pop1	100	46.183	Microtus_ochrogaster
ENSELUG00000003526	pop1	100	60.905	ENSMMOG00000018242	pop1	100	60.700	Mola_mola
ENSELUG00000003526	pop1	99	46.351	ENSMODG00000006561	POP1	99	46.724	Monodelphis_domestica
ENSELUG00000003526	pop1	100	62.828	ENSMALG00000012621	POP1	100	62.690	Monopterus_albus
ENSELUG00000003526	pop1	100	45.568	MGP_CAROLIEiJ_G0019726	Pop1	100	45.245	Mus_caroli
ENSELUG00000003526	pop1	100	46.050	ENSMUSG00000022325	Pop1	100	45.507	Mus_musculus
ENSELUG00000003526	pop1	100	45.998	MGP_PahariEiJ_G0019735	Pop1	100	45.829	Mus_pahari
ENSELUG00000003526	pop1	100	46.243	MGP_SPRETEiJ_G0020622	Pop1	100	45.962	Mus_spretus
ENSELUG00000003526	pop1	100	47.989	ENSMPUG00000015250	POP1	100	47.697	Mustela_putorius_furo
ENSELUG00000003526	pop1	100	47.605	ENSMLUG00000010204	POP1	100	47.454	Myotis_lucifugus
ENSELUG00000003526	pop1	100	46.800	ENSNGAG00000001582	Pop1	100	46.330	Nannospalax_galili
ENSELUG00000003526	pop1	100	59.312	ENSNBRG00000002356	pop1	100	59.109	Neolamprologus_brichardi
ENSELUG00000003526	pop1	100	47.198	ENSNLEG00000002541	POP1	100	47.483	Nomascus_leucogenys
ENSELUG00000003526	pop1	78	56.105	ENSMEUG00000003118	POP1	90	56.105	Notamacropus_eugenii
ENSELUG00000003526	pop1	100	48.406	ENSOPRG00000007667	POP1	100	47.541	Ochotona_princeps
ENSELUG00000003526	pop1	100	45.489	ENSODEG00000003984	POP1	100	45.428	Octodon_degus
ENSELUG00000003526	pop1	100	63.280	ENSONIG00000016445	pop1	100	62.978	Oreochromis_niloticus
ENSELUG00000003526	pop1	61	45.455	ENSOANG00000001278	-	94	45.455	Ornithorhynchus_anatinus
ENSELUG00000003526	pop1	100	47.398	ENSOCUG00000017400	POP1	100	46.767	Oryctolagus_cuniculus
ENSELUG00000003526	pop1	100	61.139	ENSORLG00000002839	pop1	100	61.168	Oryzias_latipes
ENSELUG00000003526	pop1	100	56.436	ENSORLG00020022450	POP1	100	56.337	Oryzias_latipes_hni
ENSELUG00000003526	pop1	100	60.953	ENSORLG00015012746	POP1	100	60.976	Oryzias_latipes_hsok
ENSELUG00000003526	pop1	100	61.122	ENSOMEG00000006915	pop1	99	60.914	Oryzias_melastigma
ENSELUG00000003526	pop1	100	46.654	ENSOGAG00000001466	POP1	100	45.149	Otolemur_garnettii
ENSELUG00000003526	pop1	100	47.104	ENSPPAG00000018410	POP1	100	47.533	Pan_paniscus
ENSELUG00000003526	pop1	100	47.353	ENSPPRG00000005002	POP1	100	46.770	Panthera_pardus
ENSELUG00000003526	pop1	100	47.161	ENSPTIG00000016527	POP1	100	46.124	Panthera_tigris_altaica
ENSELUG00000003526	pop1	100	47.104	ENSPTRG00000020458	POP1	100	47.533	Pan_troglodytes
ENSELUG00000003526	pop1	100	47.288	ENSPANG00000009704	POP1	100	47.288	Papio_anubis
ENSELUG00000003526	pop1	99	61.842	ENSPKIG00000016325	POP1	100	62.121	Paramormyrops_kingsleyae
ENSELUG00000003526	pop1	100	47.002	ENSPSIG00000012343	POP1	100	47.435	Pelodiscus_sinensis
ENSELUG00000003526	pop1	100	55.984	ENSPMGG00000022253	POP1	100	55.490	Periophthalmus_magnuspinnatus
ENSELUG00000003526	pop1	99	46.736	ENSPEMG00000023633	Pop1	100	46.205	Peromyscus_maniculatus_bairdii
ENSELUG00000003526	pop1	91	41.754	ENSPMAG00000003209	POP1	100	41.441	Petromyzon_marinus
ENSELUG00000003526	pop1	99	46.711	ENSPCIG00000012216	POP1	99	46.168	Phascolarctos_cinereus
ENSELUG00000003526	pop1	100	61.585	ENSPFOG00000012490	POP1	100	61.179	Poecilia_formosa
ENSELUG00000003526	pop1	100	61.687	ENSPLAG00000004646	POP1	100	61.179	Poecilia_latipinna
ENSELUG00000003526	pop1	100	61.609	ENSPMEG00000019592	POP1	100	61.202	Poecilia_mexicana
ENSELUG00000003526	pop1	100	62.132	ENSPREG00000020951	POP1	100	61.726	Poecilia_reticulata
ENSELUG00000003526	pop1	100	47.493	ENSPPYG00000018777	POP1	100	47.773	Pongo_abelii
ENSELUG00000003526	pop1	100	46.169	ENSPCAG00000016662	POP1	100	45.949	Procavia_capensis
ENSELUG00000003526	pop1	100	47.843	ENSPCOG00000019420	POP1	100	48.077	Propithecus_coquereli
ENSELUG00000003526	pop1	100	47.053	ENSPVAG00000014468	POP1	100	46.884	Pteropus_vampyrus
ENSELUG00000003526	pop1	100	60.834	ENSPNYG00000004476	pop1	100	60.631	Pundamilia_nyererei
ENSELUG00000003526	pop1	99	57.424	ENSPNAG00000000265	pop1	99	57.129	Pygocentrus_nattereri
ENSELUG00000003526	pop1	100	46.206	ENSRNOG00000005243	Pop1	100	45.115	Rattus_norvegicus
ENSELUG00000003526	pop1	100	47.660	ENSRBIG00000007996	POP1	100	47.660	Rhinopithecus_bieti
ENSELUG00000003526	pop1	100	47.660	ENSRROG00000012334	POP1	100	47.660	Rhinopithecus_roxellana
ENSELUG00000003526	pop1	99	47.206	ENSSBOG00000020830	POP1	100	47.059	Saimiri_boliviensis_boliviensis
ENSELUG00000003526	pop1	99	46.863	ENSSHAG00000000296	POP1	99	46.863	Sarcophilus_harrisii
ENSELUG00000003526	pop1	100	61.484	ENSSFOG00015007429	pop1	99	61.484	Scleropages_formosus
ENSELUG00000003526	pop1	100	62.743	ENSSMAG00000010467	POP1	100	62.717	Scophthalmus_maximus
ENSELUG00000003526	pop1	100	63.463	ENSSDUG00000007817	POP1	100	63.764	Seriola_dumerili
ENSELUG00000003526	pop1	100	63.636	ENSSLDG00000012565	POP1	100	64.036	Seriola_lalandi_dorsalis
ENSELUG00000003526	pop1	100	46.363	ENSSPUG00000003550	-	100	46.169	Sphenodon_punctatus
ENSELUG00000003526	pop1	100	60.843	ENSSPAG00000014955	pop1	100	60.040	Stegastes_partitus
ENSELUG00000003526	pop1	100	48.450	ENSSSCG00000006078	POP1	100	48.199	Sus_scrofa
ENSELUG00000003526	pop1	93	43.156	ENSTGUG00000012011	-	84	60.902	Taeniopygia_guttata
ENSELUG00000003526	pop1	100	60.609	ENSTRUG00000010856	pop1	100	60.081	Takifugu_rubripes
ENSELUG00000003526	pop1	93	62.947	ENSTNIG00000013297	pop1	98	62.526	Tetraodon_nigroviridis
ENSELUG00000003526	pop1	97	45.436	ENSTBEG00000014214	POP1	91	49.128	Tupaia_belangeri
ENSELUG00000003526	pop1	100	47.297	ENSTTRG00000016071	POP1	100	46.757	Tursiops_truncatus
ENSELUG00000003526	pop1	99	48.310	ENSUAMG00000017309	POP1	99	47.535	Ursus_americanus
ENSELUG00000003526	pop1	99	47.076	ENSUMAG00000016952	POP1	99	53.383	Ursus_maritimus
ENSELUG00000003526	pop1	86	54.965	ENSVPAG00000008278	POP1	82	54.839	Vicugna_pacos
ENSELUG00000003526	pop1	100	47.776	ENSVVUG00000010994	POP1	100	47.485	Vulpes_vulpes
ENSELUG00000003526	pop1	100	54.271	ENSXCOG00000017043	POP1	100	53.467	Xiphophorus_couchianus
ENSELUG00000003526	pop1	100	60.751	ENSXMAG00000002472	POP1	100	60.548	Xiphophorus_maculatus