EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000003584 (Gene tree)
Gene ID: 105015250
Gene Symbol: ptcd2
Alias: zgc:112401
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 4766 bases
Position: chrLG14:22810928-22815693
Accession: 105015250
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000027393	MRP-S27	PF10037.9	3.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000016093	-	2830	XM_010878261	ENSELUP00000027393	383 (aa)	XP_010876563	UPI000577AC45

Gene Model

Click here to download ENSELUG00000003584's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000003584's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000003584	ptcd2	91	50.997	ENSG00000049883	PTCD2	100	47.549	Homo_sapiens
ENSELUG00000003584	ptcd2	100	60.881	ENSAPOG00000020682	ptcd2	100	60.881	Acanthochromis_polyacanthus
ENSELUG00000003584	ptcd2	92	49.153	ENSAMEG00000007194	PTCD2	91	49.153	Ailuropoda_melanoleuca
ENSELUG00000003584	ptcd2	90	57.307	ENSACIG00000002053	ptcd2	100	57.307	Amphilophus_citrinellus
ENSELUG00000003584	ptcd2	100	61.358	ENSAOCG00000006616	ptcd2	98	61.358	Amphiprion_ocellaris
ENSELUG00000003584	ptcd2	96	62.295	ENSAPEG00000022926	ptcd2	94	62.295	Amphiprion_percula
ENSELUG00000003584	ptcd2	93	50.838	ENSACAG00000009747	PTCD2	91	50.838	Anolis_carolinensis
ENSELUG00000003584	ptcd2	99	47.644	ENSANAG00000029353	PTCD2	98	47.644	Aotus_nancymaae
ENSELUG00000003584	ptcd2	100	61.619	ENSACLG00000027742	ptcd2	98	61.619	Astatotilapia_calliptera
ENSELUG00000003584	ptcd2	94	50.693	ENSAMXG00000029404	ptcd2	96	50.693	Astyanax_mexicanus
ENSELUG00000003584	ptcd2	97	48.930	ENSBTAG00000014675	PTCD2	95	48.930	Bos_taurus
ENSELUG00000003584	ptcd2	99	47.120	ENSCJAG00000016364	PTCD2	98	47.120	Callithrix_jacchus
ENSELUG00000003584	ptcd2	96	48.942	ENSCAFG00000007982	PTCD2	88	48.942	Canis_familiaris
ENSELUG00000003584	ptcd2	90	51.009	ENSCAFG00020019147	PTCD2	97	51.009	Canis_lupus_dingo
ENSELUG00000003584	ptcd2	93	50.000	ENSCHIG00000017118	PTCD2	92	50.000	Capra_hircus
ENSELUG00000003584	ptcd2	93	47.191	ENSCPOG00000040168	PTCD2	93	47.191	Cavia_porcellus
ENSELUG00000003584	ptcd2	99	48.168	ENSCCAG00000029389	-	98	48.168	Cebus_capucinus
ENSELUG00000003584	ptcd2	78	47.195	ENSCCAG00000021996	-	93	47.195	Cebus_capucinus
ENSELUG00000003584	ptcd2	91	51.282	ENSCATG00000019069	PTCD2	91	51.282	Cercocebus_atys
ENSELUG00000003584	ptcd2	91	49.138	ENSCLAG00000000072	PTCD2	91	49.138	Chinchilla_lanigera
ENSELUG00000003584	ptcd2	91	51.852	ENSCSAG00000015623	PTCD2	91	51.852	Chlorocebus_sabaeus
ENSELUG00000003584	ptcd2	70	53.529	ENSCHOG00000010634	PTCD2	77	53.529	Choloepus_hoffmanni
ENSELUG00000003584	ptcd2	100	46.753	ENSCPBG00000000216	PTCD2	98	46.753	Chrysemys_picta_bellii
ENSELUG00000003584	ptcd2	91	52.137	ENSCANG00000035636	PTCD2	90	52.137	Colobus_angolensis_palliatus
ENSELUG00000003584	ptcd2	92	50.847	ENSCGRG00001015289	Ptcd2	77	50.847	Cricetulus_griseus_chok1gshd
ENSELUG00000003584	ptcd2	92	50.847	ENSCGRG00000006193	Ptcd2	77	50.847	Cricetulus_griseus_crigri
ENSELUG00000003584	ptcd2	96	62.568	ENSCVAG00000001285	ptcd2	94	62.568	Cyprinodon_variegatus
ENSELUG00000003584	ptcd2	100	53.003	ENSDARG00000035391	ptcd2	100	53.003	Danio_rerio
ENSELUG00000003584	ptcd2	92	50.000	ENSDNOG00000008719	PTCD2	92	50.000	Dasypus_novemcinctus
ENSELUG00000003584	ptcd2	92	50.708	ENSDORG00000004921	Ptcd2	91	50.708	Dipodomys_ordii
ENSELUG00000003584	ptcd2	91	45.170	ENSETEG00000016542	PTCD2	90	45.170	Echinops_telfairi
ENSELUG00000003584	ptcd2	96	49.077	ENSEASG00005018038	PTCD2	99	49.077	Equus_asinus_asinus
ENSELUG00000003584	ptcd2	92	51.130	ENSECAG00000007022	PTCD2	91	51.130	Equus_caballus
ENSELUG00000003584	ptcd2	91	49.425	ENSEEUG00000014031	PTCD2	90	49.425	Erinaceus_europaeus
ENSELUG00000003584	ptcd2	82	49.363	ENSFCAG00000045432	PTCD2	73	49.363	Felis_catus
ENSELUG00000003584	ptcd2	85	45.122	ENSFALG00000010299	PTCD2	99	45.122	Ficedula_albicollis
ENSELUG00000003584	ptcd2	92	47.740	ENSFDAG00000018461	PTCD2	92	47.740	Fukomys_damarensis
ENSELUG00000003584	ptcd2	99	60.260	ENSGMOG00000003637	ptcd2	99	60.260	Gadus_morhua
ENSELUG00000003584	ptcd2	92	44.350	ENSGALG00000038260	PTCD2	93	44.350	Gallus_gallus
ENSELUG00000003584	ptcd2	100	49.219	ENSGAGG00000021952	PTCD2	98	49.219	Gopherus_agassizii
ENSELUG00000003584	ptcd2	91	50.997	ENSGGOG00000010695	PTCD2	90	50.997	Gorilla_gorilla
ENSELUG00000003584	ptcd2	100	62.141	ENSHBUG00000009191	ptcd2	98	62.141	Haplochromis_burtoni
ENSELUG00000003584	ptcd2	93	48.876	ENSHGLG00000001234	PTCD2	93	48.876	Heterocephalus_glaber_female
ENSELUG00000003584	ptcd2	93	48.876	ENSHGLG00100015419	PTCD2	93	48.876	Heterocephalus_glaber_male
ENSELUG00000003584	ptcd2	93	62.465	ENSHCOG00000001703	ptcd2	92	62.465	Hippocampus_comes
ENSELUG00000003584	ptcd2	95	56.557	ENSIPUG00000006080	ptcd2	99	56.842	Ictalurus_punctatus
ENSELUG00000003584	ptcd2	93	48.739	ENSSTOG00000006596	PTCD2	93	48.739	Ictidomys_tridecemlineatus
ENSELUG00000003584	ptcd2	91	50.142	ENSJJAG00000024388	Ptcd2	92	50.142	Jaculus_jaculus
ENSELUG00000003584	ptcd2	93	53.090	ENSKMAG00000009329	ptcd2	93	53.090	Kryptolebias_marmoratus
ENSELUG00000003584	ptcd2	100	61.097	ENSLBEG00000024871	ptcd2	98	61.097	Labrus_bergylta
ENSELUG00000003584	ptcd2	100	56.883	ENSLOCG00000011122	ptcd2	100	56.883	Lepisosteus_oculatus
ENSELUG00000003584	ptcd2	72	53.650	ENSLAFG00000004115	PTCD2	90	53.214	Loxodonta_africana
ENSELUG00000003584	ptcd2	91	51.852	ENSMFAG00000031516	PTCD2	90	51.852	Macaca_fascicularis
ENSELUG00000003584	ptcd2	91	51.567	ENSMNEG00000007537	PTCD2	91	51.567	Macaca_nemestrina
ENSELUG00000003584	ptcd2	91	51.282	ENSMLEG00000031093	PTCD2	90	51.282	Mandrillus_leucophaeus
ENSELUG00000003584	ptcd2	100	60.574	ENSMAMG00000018529	ptcd2	100	60.574	Mastacembelus_armatus
ENSELUG00000003584	ptcd2	100	61.619	ENSMZEG00005003625	ptcd2	98	61.619	Maylandia_zebra
ENSELUG00000003584	ptcd2	91	44.828	ENSMGAG00000005033	PTCD2	99	44.828	Meleagris_gallopavo
ENSELUG00000003584	ptcd2	92	38.701	ENSMAUG00000020253	Ptcd2	91	38.701	Mesocricetus_auratus
ENSELUG00000003584	ptcd2	94	47.778	ENSMICG00000004535	PTCD2	93	47.778	Microcebus_murinus
ENSELUG00000003584	ptcd2	92	49.153	ENSMOCG00000019985	Ptcd2	93	49.153	Microtus_ochrogaster
ENSELUG00000003584	ptcd2	92	47.042	ENSMODG00000001695	PTCD2	92	47.042	Monodelphis_domestica
ENSELUG00000003584	ptcd2	98	64.211	ENSMALG00000022372	ptcd2	99	64.211	Monopterus_albus
ENSELUG00000003584	ptcd2	92	49.153	MGP_CAROLIEiJ_G0018829	Ptcd2	93	49.153	Mus_caroli
ENSELUG00000003584	ptcd2	92	48.305	ENSMUSG00000021650	Ptcd2	93	48.305	Mus_musculus
ENSELUG00000003584	ptcd2	92	49.153	MGP_PahariEiJ_G0015904	Ptcd2	93	49.153	Mus_pahari
ENSELUG00000003584	ptcd2	92	48.588	MGP_SPRETEiJ_G0019711	Ptcd2	93	48.588	Mus_spretus
ENSELUG00000003584	ptcd2	93	48.876	ENSMPUG00000014401	PTCD2	93	48.876	Mustela_putorius_furo
ENSELUG00000003584	ptcd2	91	49.573	ENSMLUG00000007374	PTCD2	90	49.573	Myotis_lucifugus
ENSELUG00000003584	ptcd2	91	49.138	ENSNGAG00000005027	Ptcd2	91	49.138	Nannospalax_galili
ENSELUG00000003584	ptcd2	86	60.303	ENSNBRG00000000092	-	100	60.303	Neolamprologus_brichardi
ENSELUG00000003584	ptcd2	100	60.836	ENSNBRG00000008174	ptcd2	100	60.836	Neolamprologus_brichardi
ENSELUG00000003584	ptcd2	91	50.427	ENSNLEG00000004516	PTCD2	90	50.427	Nomascus_leucogenys
ENSELUG00000003584	ptcd2	92	50.000	ENSOPRG00000007290	PTCD2	91	50.000	Ochotona_princeps
ENSELUG00000003584	ptcd2	92	50.565	ENSODEG00000016417	PTCD2	92	50.565	Octodon_degus
ENSELUG00000003584	ptcd2	86	62.500	ENSONIG00000011269	ptcd2	96	62.500	Oreochromis_niloticus
ENSELUG00000003584	ptcd2	92	50.000	ENSOCUG00000007970	PTCD2	92	50.000	Oryctolagus_cuniculus
ENSELUG00000003584	ptcd2	100	59.896	ENSORLG00000003851	ptcd2	98	59.896	Oryzias_latipes
ENSELUG00000003584	ptcd2	100	59.375	ENSORLG00020009823	ptcd2	100	59.375	Oryzias_latipes_hni
ENSELUG00000003584	ptcd2	91	61.714	ENSORLG00015016777	ptcd2	99	61.714	Oryzias_latipes_hsok
ENSELUG00000003584	ptcd2	97	60.541	ENSOMEG00000012396	ptcd2	90	60.541	Oryzias_melastigma
ENSELUG00000003584	ptcd2	94	48.056	ENSOGAG00000008390	PTCD2	93	48.056	Otolemur_garnettii
ENSELUG00000003584	ptcd2	94	50.000	ENSOARG00000005087	PTCD2	92	50.000	Ovis_aries
ENSELUG00000003584	ptcd2	91	50.997	ENSPPAG00000028480	PTCD2	90	50.997	Pan_paniscus
ENSELUG00000003584	ptcd2	91	50.712	ENSPTRG00000016968	PTCD2	90	50.712	Pan_troglodytes
ENSELUG00000003584	ptcd2	90	51.445	ENSPANG00000006611	PTCD2	89	51.445	Papio_anubis
ENSELUG00000003584	ptcd2	100	56.218	ENSPKIG00000019896	ptcd2	100	56.218	Paramormyrops_kingsleyae
ENSELUG00000003584	ptcd2	80	51.780	ENSPSIG00000014559	PTCD2	96	51.780	Pelodiscus_sinensis
ENSELUG00000003584	ptcd2	92	50.704	ENSPEMG00000000884	Ptcd2	93	50.704	Peromyscus_maniculatus_bairdii
ENSELUG00000003584	ptcd2	91	48.442	ENSPCIG00000029047	PTCD2	92	48.442	Phascolarctos_cinereus
ENSELUG00000003584	ptcd2	89	59.412	ENSPLAG00000010456	ptcd2	95	58.856	Poecilia_latipinna
ENSELUG00000003584	ptcd2	96	59.290	ENSPREG00000021797	ptcd2	93	59.290	Poecilia_reticulata
ENSELUG00000003584	ptcd2	91	45.299	ENSPPYG00000015543	PTCD2	89	45.299	Pongo_abelii
ENSELUG00000003584	ptcd2	73	45.907	ENSPCAG00000006806	PTCD2	89	45.907	Procavia_capensis
ENSELUG00000003584	ptcd2	91	48.725	ENSPVAG00000010935	PTCD2	91	48.725	Pteropus_vampyrus
ENSELUG00000003584	ptcd2	100	61.358	ENSPNYG00000003122	ptcd2	98	61.358	Pundamilia_nyererei
ENSELUG00000003584	ptcd2	100	62.953	ENSPNAG00000021490	ptcd2	100	62.953	Pygocentrus_nattereri
ENSELUG00000003584	ptcd2	92	48.588	ENSRNOG00000028403	Ptcd2	93	48.588	Rattus_norvegicus
ENSELUG00000003584	ptcd2	91	47.293	ENSRBIG00000032929	PTCD2	90	47.293	Rhinopithecus_bieti
ENSELUG00000003584	ptcd2	91	51.567	ENSRROG00000000080	PTCD2	91	51.567	Rhinopithecus_roxellana
ENSELUG00000003584	ptcd2	99	47.120	ENSSBOG00000018911	PTCD2	99	47.120	Saimiri_boliviensis_boliviensis
ENSELUG00000003584	ptcd2	95	45.055	ENSSHAG00000003833	PTCD2	94	45.055	Sarcophilus_harrisii
ENSELUG00000003584	ptcd2	100	55.065	ENSSFOG00015015415	ptcd2	100	55.065	Scleropages_formosus
ENSELUG00000003584	ptcd2	91	59.366	ENSSMAG00000010350	ptcd2	90	59.366	Scophthalmus_maximus
ENSELUG00000003584	ptcd2	100	63.446	ENSSDUG00000008142	ptcd2	95	63.446	Seriola_dumerili
ENSELUG00000003584	ptcd2	100	62.924	ENSSLDG00000015284	ptcd2	100	62.924	Seriola_lalandi_dorsalis
ENSELUG00000003584	ptcd2	73	41.577	ENSSARG00000004983	PTCD2	89	41.577	Sorex_araneus
ENSELUG00000003584	ptcd2	92	44.225	ENSSPUG00000000176	PTCD2	89	44.225	Sphenodon_punctatus
ENSELUG00000003584	ptcd2	95	58.127	ENSSPAG00000008591	ptcd2	92	58.127	Stegastes_partitus
ENSELUG00000003584	ptcd2	97	48.257	ENSSSCG00000016975	PTCD2	87	48.257	Sus_scrofa
ENSELUG00000003584	ptcd2	90	45.376	ENSTGUG00000005705	PTCD2	99	45.376	Taeniopygia_guttata
ENSELUG00000003584	ptcd2	94	48.056	ENSTBEG00000016559	PTCD2	93	48.056	Tupaia_belangeri
ENSELUG00000003584	ptcd2	94	50.556	ENSTTRG00000011851	PTCD2	92	50.556	Tursiops_truncatus
ENSELUG00000003584	ptcd2	92	48.870	ENSUAMG00000007583	PTCD2	83	48.870	Ursus_americanus
ENSELUG00000003584	ptcd2	92	48.870	ENSUMAG00000007666	PTCD2	92	48.870	Ursus_maritimus
ENSELUG00000003584	ptcd2	92	48.023	ENSVPAG00000009597	PTCD2	91	48.023	Vicugna_pacos
ENSELUG00000003584	ptcd2	91	50.712	ENSVVUG00000007299	-	91	50.712	Vulpes_vulpes
ENSELUG00000003584	ptcd2	95	44.932	ENSXETG00000031652	PTCD2	95	44.932	Xenopus_tropicalis
ENSELUG00000003584	ptcd2	89	59.706	ENSXMAG00000005940	ptcd2	87	59.128	Xiphophorus_maculatus