EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000003600 (Gene tree)
Gene ID: 105028608
Gene Symbol: rbmx
Alias: fc66e11|wu:fb37c07|wu:fc66e11
Full Name: RNA binding motif protein X-linked
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 5146 bases
Position: chrLG04:1912873-1918018
Accession: 105028608
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000002227	RBM1CTR	PF08081.11	2e-16	1	1
ENSELUP00000027387	RBM1CTR	PF08081.11	4.9e-16	1	1
ENSELUP00000002227	RRM_1	PF00076.22	1.2e-23	1	1
ENSELUP00000027387	RRM_1	PF00076.22	2.1e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000016078	-	2392	XM_010901466	ENSELUP00000027387	391 (aa)	XP_010899768	UPI0005775E93
ENSELUT00000016067	-	1420	-	ENSELUP00000002227	278 (aa)	-	-

Gene Model

Click here to download ENSELUG00000003600's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000003600's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000003600	rbmx	50	40.506	ENSELUG00000010286	dazap1	61	40.000
ENSELUG00000003600	rbmx	50	41.429	ENSELUG00000023280	-	58	41.429
ENSELUG00000003600	rbmx	50	42.254	ENSELUG00000011747	msi2a	64	42.254

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000003600	rbmx	100	85.279	ENSAPOG00000006496	rbmx	100	85.279	Acanthochromis_polyacanthus
ENSELUG00000003600	rbmx	100	83.571	ENSACIG00000011576	rbmx	100	82.697	Amphilophus_citrinellus
ENSELUG00000003600	rbmx	98	79.587	ENSACIG00000011598	rbmx	98	79.845	Amphilophus_citrinellus
ENSELUG00000003600	rbmx	100	86.041	ENSAOCG00000020930	rbmx	100	86.294	Amphiprion_ocellaris
ENSELUG00000003600	rbmx	100	85.279	ENSAPEG00000007316	rbmx	95	86.559	Amphiprion_percula
ENSELUG00000003600	rbmx	100	85.279	ENSATEG00000017363	rbmx	100	85.533	Anabas_testudineus
ENSELUG00000003600	rbmx	100	85.279	ENSACLG00000000098	rbmx	100	85.533	Astatotilapia_calliptera
ENSELUG00000003600	rbmx	100	87.589	ENSAMXG00000019990	rbmx	94	84.677	Astyanax_mexicanus
ENSELUG00000003600	rbmx	100	85.496	ENSCSEG00000005240	rbmx	100	85.751	Cynoglossus_semilaevis
ENSELUG00000003600	rbmx	100	79.167	ENSCVAG00000008876	rbmx	100	82.188	Cyprinodon_variegatus
ENSELUG00000003600	rbmx	100	81.851	ENSDARG00000014244	rbmx	100	88.136	Danio_rerio
ENSELUG00000003600	rbmx	100	58.214	ENSEBUG00000006778	rbmx	99	53.929	Eptatretus_burgeri
ENSELUG00000003600	rbmx	100	80.556	ENSFHEG00000016764	rbmx	100	82.697	Fundulus_heteroclitus
ENSELUG00000003600	rbmx	100	80.846	ENSGMOG00000004496	rbmx	100	80.846	Gadus_morhua
ENSELUG00000003600	rbmx	100	78.472	ENSGAFG00000019917	rbmx	100	82.188	Gambusia_affinis
ENSELUG00000003600	rbmx	100	81.203	ENSGACG00000017237	rbmx	100	81.750	Gasterosteus_aculeatus
ENSELUG00000003600	rbmx	100	85.533	ENSHBUG00000015283	rbmx	100	85.787	Haplochromis_burtoni
ENSELUG00000003600	rbmx	100	75.342	ENSHCOG00000001111	rbmx	100	75.768	Hippocampus_comes
ENSELUG00000003600	rbmx	100	84.043	ENSIPUG00000022212	rbmx	94	77.151	Ictalurus_punctatus
ENSELUG00000003600	rbmx	100	81.661	ENSKMAG00000001754	rbmx	100	84.264	Kryptolebias_marmoratus
ENSELUG00000003600	rbmx	100	83.986	ENSLBEG00000010000	rbmx	100	82.188	Labrus_bergylta
ENSELUG00000003600	rbmx	100	72.603	ENSLACG00000015261	rbmx	94	70.185	Latimeria_chalumnae
ENSELUG00000003600	rbmx	100	80.743	ENSLOCG00000015142	rbmx	94	82.540	Lepisosteus_oculatus
ENSELUG00000003600	rbmx	100	85.533	ENSMAMG00000020591	rbmx	100	85.787	Mastacembelus_armatus
ENSELUG00000003600	rbmx	100	83.391	ENSMZEG00005006432	rbmx	87	85.955	Maylandia_zebra
ENSELUG00000003600	rbmx	100	81.661	ENSMMOG00000001043	rbmx	100	83.249	Mola_mola
ENSELUG00000003600	rbmx	100	79.389	ENSMALG00000009777	rbmx	100	79.644	Monopterus_albus
ENSELUG00000003600	rbmx	100	85.533	ENSNBRG00000022154	rbmx	100	85.787	Neolamprologus_brichardi
ENSELUG00000003600	rbmx	100	84.810	ENSONIG00000002700	rbmx	100	84.772	Oreochromis_niloticus
ENSELUG00000003600	rbmx	100	84.010	ENSORLG00000001692	rbmx	100	81.218	Oryzias_latipes
ENSELUG00000003600	rbmx	100	84.264	ENSORLG00020021132	rbmx	100	81.472	Oryzias_latipes_hni
ENSELUG00000003600	rbmx	100	83.503	ENSORLG00015000330	rbmx	100	80.711	Oryzias_latipes_hsok
ENSELUG00000003600	rbmx	100	84.518	ENSOMEG00000016787	rbmx	100	81.726	Oryzias_melastigma
ENSELUG00000003600	rbmx	100	82.562	ENSPKIG00000024910	-	94	80.593	Paramormyrops_kingsleyae
ENSELUG00000003600	rbmx	100	70.357	ENSPKIG00000017611	rbmx	94	70.081	Paramormyrops_kingsleyae
ENSELUG00000003600	rbmx	100	76.157	ENSPMGG00000017906	rbmx	96	78.226	Periophthalmus_magnuspinnatus
ENSELUG00000003600	rbmx	100	78.472	ENSPFOG00000013193	rbmx	94	81.892	Poecilia_formosa
ENSELUG00000003600	rbmx	100	78.125	ENSPLAG00000010472	rbmx	94	81.622	Poecilia_latipinna
ENSELUG00000003600	rbmx	100	78.472	ENSPMEG00000007579	rbmx	94	81.892	Poecilia_mexicana
ENSELUG00000003600	rbmx	100	78.125	ENSPREG00000010279	rbmx	94	81.622	Poecilia_reticulata
ENSELUG00000003600	rbmx	100	85.533	ENSPNYG00000012536	rbmx	100	85.787	Pundamilia_nyererei
ENSELUG00000003600	rbmx	100	87.589	ENSPNAG00000019648	rbmx	94	84.677	Pygocentrus_nattereri
ENSELUG00000003600	rbmx	100	80.000	ENSSFOG00015011749	-	94	79.301	Scleropages_formosus
ENSELUG00000003600	rbmx	100	81.429	ENSSFOG00015008229	rbmx	94	82.480	Scleropages_formosus
ENSELUG00000003600	rbmx	100	81.472	ENSSMAG00000014636	rbmx	100	83.503	Scophthalmus_maximus
ENSELUG00000003600	rbmx	100	85.787	ENSSDUG00000000242	rbmx	100	86.041	Seriola_dumerili
ENSELUG00000003600	rbmx	100	85.787	ENSSLDG00000021381	rbmx	100	86.041	Seriola_lalandi_dorsalis
ENSELUG00000003600	rbmx	100	86.041	ENSSPAG00000008582	rbmx	100	86.294	Stegastes_partitus
ENSELUG00000003600	rbmx	100	80.903	ENSTRUG00000006031	rbmx	94	82.527	Takifugu_rubripes
ENSELUG00000003600	rbmx	100	78.648	ENSTNIG00000016844	rbmx	94	82.038	Tetraodon_nigroviridis
ENSELUG00000003600	rbmx	64	61.240	ENSUAMG00000011752	-	87	61.017	Ursus_americanus
ENSELUG00000003600	rbmx	64	60.853	ENSUMAG00000019276	-	87	60.593	Ursus_maritimus
ENSELUG00000003600	rbmx	100	48.288	ENSXETG00000003481	rbmx	94	51.444	Xenopus_tropicalis
ENSELUG00000003600	rbmx	97	72.694	ENSXCOG00000016084	rbmx	99	76.562	Xiphophorus_couchianus
ENSELUG00000003600	rbmx	100	78.125	ENSXMAG00000013407	rbmx	100	81.934	Xiphophorus_maculatus