EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000003741 (Gene tree)
Gene ID: 105011374
Gene Symbol: rtca
Alias: cb158|rtcd1|sb:cb158|wu:fc62c03
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 6196 bases
Position: chrLG08:8168363-8174558
Accession: 105011374
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000002386	RTC	PF01137.21	4.6e-86	1	1
ENSELUP00000002386	RTC_insert	PF05189.13	4.8e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000015800	-	3059	XM_010871354	ENSELUP00000002386	363 (aa)	XP_010869656	UPI000577A5AB

Gene Model

Click here to download ENSELUG00000003741's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000003741's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000003741	rtca	99	71.745	ENSG00000137996	RTCA	99	71.745	Homo_sapiens
ENSELUG00000003741	rtca	99	77.624	ENSAPOG00000001345	rtca	99	77.624	Acanthochromis_polyacanthus
ENSELUG00000003741	rtca	74	72.119	ENSAMEG00000008855	RTCA	100	72.119	Ailuropoda_melanoleuca
ENSELUG00000003741	rtca	99	79.006	ENSACIG00000019643	rtca	99	79.006	Amphilophus_citrinellus
ENSELUG00000003741	rtca	99	77.624	ENSAOCG00000014979	rtca	99	77.624	Amphiprion_ocellaris
ENSELUG00000003741	rtca	99	77.624	ENSAPEG00000006945	rtca	99	77.624	Amphiprion_percula
ENSELUG00000003741	rtca	96	78.223	ENSATEG00000006315	rtca	96	78.223	Anabas_testudineus
ENSELUG00000003741	rtca	96	65.722	ENSAPLG00000015430	RTCA	100	65.722	Anas_platyrhynchos
ENSELUG00000003741	rtca	99	72.022	ENSANAG00000025446	RTCA	99	72.022	Aotus_nancymaae
ENSELUG00000003741	rtca	99	78.552	ENSACLG00000020770	rtca	98	78.552	Astatotilapia_calliptera
ENSELUG00000003741	rtca	100	81.868	ENSAMXG00000043271	rtca	100	81.868	Astyanax_mexicanus
ENSELUG00000003741	rtca	99	72.853	ENSBTAG00000006321	RTCA	99	72.853	Bos_taurus
ENSELUG00000003741	rtca	99	72.022	ENSCJAG00000003398	RTCA	99	72.022	Callithrix_jacchus
ENSELUG00000003741	rtca	99	71.468	ENSCAFG00000020010	RTCA	67	71.468	Canis_familiaris
ENSELUG00000003741	rtca	99	71.468	ENSCAFG00020011528	RTCA	56	71.468	Canis_lupus_dingo
ENSELUG00000003741	rtca	99	72.576	ENSCHIG00000018937	RTCA	99	72.576	Capra_hircus
ENSELUG00000003741	rtca	99	72.022	ENSTSYG00000011305	RTCA	99	72.022	Carlito_syrichta
ENSELUG00000003741	rtca	99	71.745	ENSCCAG00000021844	RTCA	99	71.745	Cebus_capucinus
ENSELUG00000003741	rtca	99	69.519	ENSCATG00000019364	RTCA	100	70.550	Cercocebus_atys
ENSELUG00000003741	rtca	87	71.835	ENSCLAG00000006125	RTCA	100	71.835	Chinchilla_lanigera
ENSELUG00000003741	rtca	99	72.299	ENSCSAG00000001509	RTCA	99	72.299	Chlorocebus_sabaeus
ENSELUG00000003741	rtca	99	71.667	ENSCHOG00000005211	RTCA	98	71.667	Choloepus_hoffmanni
ENSELUG00000003741	rtca	98	67.787	ENSCPBG00000026658	RTCA	98	67.787	Chrysemys_picta_bellii
ENSELUG00000003741	rtca	99	53.719	ENSCING00000007875	-	99	53.719	Ciona_intestinalis
ENSELUG00000003741	rtca	99	54.270	ENSCSAVG00000007269	-	99	54.270	Ciona_savignyi
ENSELUG00000003741	rtca	99	72.022	ENSCANG00000040106	RTCA	99	72.022	Colobus_angolensis_palliatus
ENSELUG00000003741	rtca	74	72.119	ENSCGRG00001013163	Rtca	85	72.119	Cricetulus_griseus_chok1gshd
ENSELUG00000003741	rtca	99	73.757	ENSCSEG00000000530	rtca	97	73.757	Cynoglossus_semilaevis
ENSELUG00000003741	rtca	99	63.661	ENSCVAG00000021809	rtca	99	63.661	Cyprinodon_variegatus
ENSELUG00000003741	rtca	99	82.873	ENSDARG00000002215	rtca	99	82.873	Danio_rerio
ENSELUG00000003741	rtca	99	71.944	ENSDNOG00000000456	RTCA	98	71.944	Dasypus_novemcinctus
ENSELUG00000003741	rtca	99	72.299	ENSDORG00000005448	Rtca	99	72.299	Dipodomys_ordii
ENSELUG00000003741	rtca	98	39.496	FBgn0025630	Rtca	98	39.496	Drosophila_melanogaster
ENSELUG00000003741	rtca	95	52.601	ENSEBUG00000008556	rtca	95	52.601	Eptatretus_burgeri
ENSELUG00000003741	rtca	99	71.745	ENSEASG00005015926	RTCA	99	71.745	Equus_asinus_asinus
ENSELUG00000003741	rtca	99	71.745	ENSECAG00000019831	RTCA	99	71.745	Equus_caballus
ENSELUG00000003741	rtca	90	64.223	ENSEEUG00000001165	RTCA	99	64.223	Erinaceus_europaeus
ENSELUG00000003741	rtca	99	72.022	ENSFCAG00000024460	RTCA	99	72.022	Felis_catus
ENSELUG00000003741	rtca	90	68.902	ENSFALG00000002443	RTCA	88	68.902	Ficedula_albicollis
ENSELUG00000003741	rtca	99	71.745	ENSFDAG00000012070	-	99	71.745	Fukomys_damarensis
ENSELUG00000003741	rtca	98	57.618	ENSFDAG00000016084	-	99	57.618	Fukomys_damarensis
ENSELUG00000003741	rtca	56	79.208	ENSFHEG00000002868	rtca	93	75.229	Fundulus_heteroclitus
ENSELUG00000003741	rtca	99	77.901	ENSGMOG00000013264	rtca	99	77.901	Gadus_morhua
ENSELUG00000003741	rtca	99	66.667	ENSGALG00000005277	RTCA	99	66.667	Gallus_gallus
ENSELUG00000003741	rtca	99	76.519	ENSGAFG00000011853	rtca	99	76.519	Gambusia_affinis
ENSELUG00000003741	rtca	99	76.796	ENSGACG00000013497	rtca	99	76.796	Gasterosteus_aculeatus
ENSELUG00000003741	rtca	79	67.361	ENSGAGG00000023306	RTCA	98	67.361	Gopherus_agassizii
ENSELUG00000003741	rtca	99	71.191	ENSGGOG00000044018	-	99	71.191	Gorilla_gorilla
ENSELUG00000003741	rtca	99	71.745	ENSGGOG00000009546	-	99	71.745	Gorilla_gorilla
ENSELUG00000003741	rtca	99	78.273	ENSHBUG00000002114	rtca	98	78.273	Haplochromis_burtoni
ENSELUG00000003741	rtca	99	72.022	ENSHGLG00000002617	RTCA	99	72.022	Heterocephalus_glaber_female
ENSELUG00000003741	rtca	99	72.022	ENSHGLG00100006056	RTCA	99	72.022	Heterocephalus_glaber_male
ENSELUG00000003741	rtca	99	71.866	ENSHCOG00000020628	rtca	88	71.866	Hippocampus_comes
ENSELUG00000003741	rtca	100	81.044	ENSIPUG00000024803	rtca	100	81.044	Ictalurus_punctatus
ENSELUG00000003741	rtca	99	63.712	ENSSTOG00000033099	-	99	63.712	Ictidomys_tridecemlineatus
ENSELUG00000003741	rtca	99	66.205	ENSSTOG00000013528	-	93	72.327	Ictidomys_tridecemlineatus
ENSELUG00000003741	rtca	99	53.333	ENSJJAG00000016178	Rtca	98	53.333	Jaculus_jaculus
ENSELUG00000003741	rtca	99	77.624	ENSKMAG00000006651	rtca	99	77.624	Kryptolebias_marmoratus
ENSELUG00000003741	rtca	88	80.564	ENSLBEG00000002448	-	99	80.564	Labrus_bergylta
ENSELUG00000003741	rtca	100	79.890	ENSLBEG00000028971	rtca	100	79.890	Labrus_bergylta
ENSELUG00000003741	rtca	99	69.359	ENSLACG00000013666	RTCA	98	69.359	Latimeria_chalumnae
ENSELUG00000003741	rtca	99	79.614	ENSLOCG00000000093	rtca	99	79.614	Lepisosteus_oculatus
ENSELUG00000003741	rtca	99	71.191	ENSLAFG00000001473	RTCA	99	71.191	Loxodonta_africana
ENSELUG00000003741	rtca	99	72.299	ENSMFAG00000034132	RTCA	99	72.299	Macaca_fascicularis
ENSELUG00000003741	rtca	99	72.299	ENSMMUG00000019105	RTCA	99	72.299	Macaca_mulatta
ENSELUG00000003741	rtca	85	70.874	ENSMNEG00000037163	RTCA	100	70.874	Macaca_nemestrina
ENSELUG00000003741	rtca	99	59.280	ENSMLEG00000042151	RTCA	98	59.280	Mandrillus_leucophaeus
ENSELUG00000003741	rtca	99	78.729	ENSMAMG00000016536	rtca	99	78.729	Mastacembelus_armatus
ENSELUG00000003741	rtca	99	78.552	ENSMZEG00005017945	rtca	98	78.552	Maylandia_zebra
ENSELUG00000003741	rtca	87	67.296	ENSMGAG00000006892	RTCA	99	67.296	Meleagris_gallopavo
ENSELUG00000003741	rtca	99	72.299	ENSMAUG00000008488	Rtca	99	72.299	Mesocricetus_auratus
ENSELUG00000003741	rtca	85	71.521	ENSMICG00000008643	RTCA	100	71.521	Microcebus_murinus
ENSELUG00000003741	rtca	99	72.022	ENSMOCG00000016660	Rtca	99	72.022	Microtus_ochrogaster
ENSELUG00000003741	rtca	84	78.033	ENSMMOG00000007750	rtca	99	78.033	Mola_mola
ENSELUG00000003741	rtca	99	72.022	ENSMODG00000003557	RTCA	99	72.022	Monodelphis_domestica
ENSELUG00000003741	rtca	99	78.453	ENSMALG00000020844	rtca	99	78.453	Monopterus_albus
ENSELUG00000003741	rtca	99	70.914	MGP_CAROLIEiJ_G0025565	Rtca	99	70.914	Mus_caroli
ENSELUG00000003741	rtca	99	70.360	ENSMUSG00000000339	Rtca	99	70.360	Mus_musculus
ENSELUG00000003741	rtca	99	70.914	MGP_PahariEiJ_G0027011	Rtca	99	70.914	Mus_pahari
ENSELUG00000003741	rtca	99	70.637	MGP_SPRETEiJ_G0026515	Rtca	99	70.637	Mus_spretus
ENSELUG00000003741	rtca	99	71.703	ENSMPUG00000012119	RTCA	99	71.703	Mustela_putorius_furo
ENSELUG00000003741	rtca	99	68.232	ENSMLUG00000009922	RTCA	99	68.232	Myotis_lucifugus
ENSELUG00000003741	rtca	99	71.468	ENSNGAG00000011540	Rtca	98	71.468	Nannospalax_galili
ENSELUG00000003741	rtca	99	78.552	ENSNBRG00000003062	rtca	98	78.552	Neolamprologus_brichardi
ENSELUG00000003741	rtca	99	71.745	ENSNLEG00000031426	RTCA	99	71.745	Nomascus_leucogenys
ENSELUG00000003741	rtca	74	67.658	ENSOPRG00000012092	RTCA	71	67.658	Ochotona_princeps
ENSELUG00000003741	rtca	95	71.264	ENSODEG00000006990	RTCA	96	71.510	Octodon_degus
ENSELUG00000003741	rtca	99	77.994	ENSONIG00000007753	rtca	98	77.994	Oreochromis_niloticus
ENSELUG00000003741	rtca	87	71.293	ENSOANG00000012055	RTCA	98	71.293	Ornithorhynchus_anatinus
ENSELUG00000003741	rtca	99	72.853	ENSOCUG00000014247	RTCA	99	72.853	Oryctolagus_cuniculus
ENSELUG00000003741	rtca	99	77.624	ENSORLG00000013605	rtca	99	77.624	Oryzias_latipes
ENSELUG00000003741	rtca	99	77.901	ENSORLG00020001904	rtca	99	77.901	Oryzias_latipes_hni
ENSELUG00000003741	rtca	99	77.901	ENSORLG00015021064	rtca	99	77.901	Oryzias_latipes_hsok
ENSELUG00000003741	rtca	99	77.901	ENSOMEG00000000756	rtca	99	77.901	Oryzias_melastigma
ENSELUG00000003741	rtca	99	65.928	ENSOGAG00000005627	RTCA	99	65.928	Otolemur_garnettii
ENSELUG00000003741	rtca	87	72.013	ENSOARG00000018122	RTCA	100	72.013	Ovis_aries
ENSELUG00000003741	rtca	99	69.251	ENSPPAG00000035119	RTCA	100	70.227	Pan_paniscus
ENSELUG00000003741	rtca	99	72.299	ENSPPRG00000000350	RTCA	99	72.299	Panthera_pardus
ENSELUG00000003741	rtca	99	71.745	ENSPTIG00000012816	RTCA	99	71.745	Panthera_tigris_altaica
ENSELUG00000003741	rtca	99	69.251	ENSPTRG00000001004	RTCA	100	70.227	Pan_troglodytes
ENSELUG00000003741	rtca	99	72.576	ENSPANG00000000346	RTCA	99	72.576	Papio_anubis
ENSELUG00000003741	rtca	99	82.320	ENSPKIG00000001653	rtca	99	82.320	Paramormyrops_kingsleyae
ENSELUG00000003741	rtca	99	66.944	ENSPSIG00000011408	RTCA	99	66.944	Pelodiscus_sinensis
ENSELUG00000003741	rtca	99	71.745	ENSPEMG00000018582	Rtca	99	71.745	Peromyscus_maniculatus_bairdii
ENSELUG00000003741	rtca	99	55.679	ENSPMAG00000009110	rtca	98	55.679	Petromyzon_marinus
ENSELUG00000003741	rtca	99	71.191	ENSPCIG00000007684	RTCA	99	71.191	Phascolarctos_cinereus
ENSELUG00000003741	rtca	99	77.135	ENSPFOG00000004824	rtca	99	77.135	Poecilia_formosa
ENSELUG00000003741	rtca	99	77.624	ENSPLAG00000011753	rtca	99	77.624	Poecilia_latipinna
ENSELUG00000003741	rtca	99	77.624	ENSPMEG00000020469	rtca	99	77.624	Poecilia_mexicana
ENSELUG00000003741	rtca	99	76.796	ENSPREG00000001365	rtca	99	76.796	Poecilia_reticulata
ENSELUG00000003741	rtca	99	72.299	ENSPPYG00000001115	RTCA	99	72.299	Pongo_abelii
ENSELUG00000003741	rtca	99	70.083	ENSPCAG00000005076	RTCA	99	70.083	Procavia_capensis
ENSELUG00000003741	rtca	99	72.576	ENSPCOG00000005603	RTCA	99	72.576	Propithecus_coquereli
ENSELUG00000003741	rtca	99	68.984	ENSPVAG00000009478	RTCA	99	68.984	Pteropus_vampyrus
ENSELUG00000003741	rtca	99	78.552	ENSPNYG00000004722	rtca	98	78.552	Pundamilia_nyererei
ENSELUG00000003741	rtca	99	80.939	ENSPNAG00000022270	rtca	99	80.939	Pygocentrus_nattereri
ENSELUG00000003741	rtca	99	70.637	ENSRNOG00000014575	Rtca	99	70.637	Rattus_norvegicus
ENSELUG00000003741	rtca	99	69.251	ENSRBIG00000041180	RTCA	100	70.227	Rhinopithecus_bieti
ENSELUG00000003741	rtca	99	71.745	ENSRROG00000024929	RTCA	99	71.745	Rhinopithecus_roxellana
ENSELUG00000003741	rtca	99	71.191	ENSSBOG00000028626	RTCA	99	71.191	Saimiri_boliviensis_boliviensis
ENSELUG00000003741	rtca	99	71.468	ENSSHAG00000001758	RTCA	99	71.468	Sarcophilus_harrisii
ENSELUG00000003741	rtca	99	77.374	ENSSMAG00000014680	rtca	97	77.374	Scophthalmus_maximus
ENSELUG00000003741	rtca	98	78.592	ENSSDUG00000015585	rtca	97	78.056	Seriola_dumerili
ENSELUG00000003741	rtca	99	77.222	ENSSLDG00000018985	rtca	97	77.222	Seriola_lalandi_dorsalis
ENSELUG00000003741	rtca	87	67.823	ENSSARG00000013993	RTCA	100	67.823	Sorex_araneus
ENSELUG00000003741	rtca	99	78.177	ENSSPAG00000011938	rtca	99	78.177	Stegastes_partitus
ENSELUG00000003741	rtca	99	72.022	ENSSSCG00000006865	RTCA	99	72.022	Sus_scrofa
ENSELUG00000003741	rtca	99	68.611	ENSTGUG00000005154	RTCA	99	68.611	Taeniopygia_guttata
ENSELUG00000003741	rtca	99	78.177	ENSTRUG00000008799	rtca	99	78.177	Takifugu_rubripes
ENSELUG00000003741	rtca	99	78.729	ENSTNIG00000004725	rtca	99	78.729	Tetraodon_nigroviridis
ENSELUG00000003741	rtca	58	60.000	ENSTBEG00000000943	RTCA	59	60.000	Tupaia_belangeri
ENSELUG00000003741	rtca	99	69.786	ENSTTRG00000015327	RTCA	99	69.786	Tursiops_truncatus
ENSELUG00000003741	rtca	93	71.006	ENSUAMG00000017265	RTCA	95	71.006	Ursus_americanus
ENSELUG00000003741	rtca	99	71.468	ENSUMAG00000007881	RTCA	99	71.468	Ursus_maritimus
ENSELUG00000003741	rtca	87	63.091	ENSVPAG00000001039	RTCA	84	63.091	Vicugna_pacos
ENSELUG00000003741	rtca	99	71.468	ENSVVUG00000022041	RTCA	67	71.468	Vulpes_vulpes
ENSELUG00000003741	rtca	98	59.116	ENSXETG00000031661	RTCA	98	59.116	Xenopus_tropicalis
ENSELUG00000003741	rtca	99	65.193	ENSXCOG00000008002	rtca	99	65.193	Xiphophorus_couchianus
ENSELUG00000003741	rtca	99	76.519	ENSXMAG00000005482	rtca	99	76.519	Xiphophorus_maculatus