EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000003802 (Gene tree)
Gene ID: 105017430
Gene Symbol: trnt1
Alias: zgc:86645
Full Name: tRNA nucleotidyl transferase 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 9364 bases
Position: chrLG17:28815198-28824561
Accession: 105017430
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000002463	PolyA_pol	PF01743.20	2.1e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000015683	-	1705	XM_010882054	ENSELUP00000002463	430 (aa)	XP_010880356	UPI0005773A7D

Gene Model

Click here to download ENSELUG00000003802's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000003802's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000003802	trnt1	97	68.558	ENSG00000072756	TRNT1	97	68.558	Homo_sapiens
ENSELUG00000003802	trnt1	99	78.037	ENSAPOG00000013687	trnt1	99	78.037	Acanthochromis_polyacanthus
ENSELUG00000003802	trnt1	99	67.051	ENSAMEG00000014520	TRNT1	99	67.051	Ailuropoda_melanoleuca
ENSELUG00000003802	trnt1	99	80.094	ENSACIG00000021706	trnt1	99	80.094	Amphilophus_citrinellus
ENSELUG00000003802	trnt1	99	81.030	ENSAOCG00000024612	trnt1	99	81.030	Amphiprion_ocellaris
ENSELUG00000003802	trnt1	96	74.092	ENSAPEG00000022627	trnt1	95	74.092	Amphiprion_percula
ENSELUG00000003802	trnt1	93	83.085	ENSATEG00000008928	trnt1	99	83.085	Anabas_testudineus
ENSELUG00000003802	trnt1	89	68.750	ENSAPLG00000004258	TRNT1	95	68.750	Anas_platyrhynchos
ENSELUG00000003802	trnt1	98	65.952	ENSACAG00000005657	TRNT1	95	65.952	Anolis_carolinensis
ENSELUG00000003802	trnt1	95	69.853	ENSANAG00000024802	TRNT1	94	69.853	Aotus_nancymaae
ENSELUG00000003802	trnt1	99	78.689	ENSACLG00000022227	trnt1	99	78.689	Astatotilapia_calliptera
ENSELUG00000003802	trnt1	100	78.886	ENSAMXG00000003960	trnt1	100	78.886	Astyanax_mexicanus
ENSELUG00000003802	trnt1	99	67.133	ENSBTAG00000019534	TRNT1	98	67.133	Bos_taurus
ENSELUG00000003802	trnt1	94	42.926	WBGene00010089	hpo-31	94	42.926	Caenorhabditis_elegans
ENSELUG00000003802	trnt1	95	70.098	ENSCJAG00000015466	TRNT1	94	70.098	Callithrix_jacchus
ENSELUG00000003802	trnt1	99	67.824	ENSCAFG00000005985	TRNT1	99	67.824	Canis_familiaris
ENSELUG00000003802	trnt1	99	67.824	ENSCAFG00020014746	TRNT1	99	67.824	Canis_lupus_dingo
ENSELUG00000003802	trnt1	99	67.133	ENSCHIG00000007030	TRNT1	98	67.133	Capra_hircus
ENSELUG00000003802	trnt1	99	67.593	ENSTSYG00000013390	TRNT1	99	67.593	Carlito_syrichta
ENSELUG00000003802	trnt1	78	60.119	ENSCAPG00000006891	TRNT1	93	60.119	Cavia_aperea
ENSELUG00000003802	trnt1	99	66.355	ENSCPOG00000007849	TRNT1	98	66.355	Cavia_porcellus
ENSELUG00000003802	trnt1	92	70.101	ENSCCAG00000002919	TRNT1	97	71.059	Cebus_capucinus
ENSELUG00000003802	trnt1	95	71.253	ENSCATG00000031985	TRNT1	93	71.253	Cercocebus_atys
ENSELUG00000003802	trnt1	99	67.523	ENSCLAG00000005186	TRNT1	98	67.523	Chinchilla_lanigera
ENSELUG00000003802	trnt1	95	70.833	ENSCSAG00000011052	TRNT1	94	70.833	Chlorocebus_sabaeus
ENSELUG00000003802	trnt1	84	73.096	ENSCHOG00000005712	TRNT1	83	73.096	Choloepus_hoffmanni
ENSELUG00000003802	trnt1	95	69.512	ENSCPBG00000017636	TRNT1	94	69.512	Chrysemys_picta_bellii
ENSELUG00000003802	trnt1	93	41.895	ENSCING00000007069	-	99	41.895	Ciona_intestinalis
ENSELUG00000003802	trnt1	93	42.500	ENSCSAVG00000007494	-	94	42.500	Ciona_savignyi
ENSELUG00000003802	trnt1	95	70.588	ENSCANG00000039030	TRNT1	94	70.588	Colobus_angolensis_palliatus
ENSELUG00000003802	trnt1	99	67.133	ENSCGRG00001009998	Trnt1	98	67.133	Cricetulus_griseus_chok1gshd
ENSELUG00000003802	trnt1	99	67.133	ENSCGRG00000013410	Trnt1	94	72.139	Cricetulus_griseus_crigri
ENSELUG00000003802	trnt1	99	77.752	ENSCSEG00000008157	trnt1	99	77.752	Cynoglossus_semilaevis
ENSELUG00000003802	trnt1	99	79.391	ENSCVAG00000019770	trnt1	99	79.391	Cyprinodon_variegatus
ENSELUG00000003802	trnt1	100	79.118	ENSDARG00000075297	trnt1	100	79.118	Danio_rerio
ENSELUG00000003802	trnt1	99	69.231	ENSDNOG00000008837	TRNT1	98	69.231	Dasypus_novemcinctus
ENSELUG00000003802	trnt1	99	67.593	ENSDORG00000014035	Trnt1	99	67.593	Dipodomys_ordii
ENSELUG00000003802	trnt1	93	47.880	FBgn0037369	CG2100	83	47.880	Drosophila_melanogaster
ENSELUG00000003802	trnt1	58	70.683	ENSETEG00000018177	TRNT1	100	70.683	Echinops_telfairi
ENSELUG00000003802	trnt1	94	62.469	ENSEBUG00000012779	-	95	62.469	Eptatretus_burgeri
ENSELUG00000003802	trnt1	99	68.287	ENSEASG00005003577	TRNT1	99	68.287	Equus_asinus_asinus
ENSELUG00000003802	trnt1	99	68.519	ENSECAG00000014420	TRNT1	99	68.519	Equus_caballus
ENSELUG00000003802	trnt1	95	70.588	ENSEEUG00000009567	TRNT1	94	70.588	Erinaceus_europaeus
ENSELUG00000003802	trnt1	99	68.065	ENSFCAG00000026805	TRNT1	98	68.065	Felis_catus
ENSELUG00000003802	trnt1	89	69.271	ENSFALG00000013539	TRNT1	99	69.271	Ficedula_albicollis
ENSELUG00000003802	trnt1	99	68.213	ENSFDAG00000018412	TRNT1	99	68.213	Fukomys_damarensis
ENSELUG00000003802	trnt1	99	79.391	ENSFHEG00000019294	trnt1	99	79.391	Fundulus_heteroclitus
ENSELUG00000003802	trnt1	99	78.454	ENSGMOG00000007460	trnt1	100	78.454	Gadus_morhua
ENSELUG00000003802	trnt1	95	66.259	ENSGALG00000017368	TRNT1	95	66.259	Gallus_gallus
ENSELUG00000003802	trnt1	99	79.391	ENSGAFG00000008647	trnt1	99	79.391	Gambusia_affinis
ENSELUG00000003802	trnt1	99	78.923	ENSGACG00000011903	trnt1	99	78.923	Gasterosteus_aculeatus
ENSELUG00000003802	trnt1	99	69.340	ENSGAGG00000020942	TRNT1	96	69.340	Gopherus_agassizii
ENSELUG00000003802	trnt1	97	68.794	ENSGGOG00000015286	TRNT1	97	68.794	Gorilla_gorilla
ENSELUG00000003802	trnt1	99	78.923	ENSHBUG00000002797	trnt1	99	78.923	Haplochromis_burtoni
ENSELUG00000003802	trnt1	99	68.065	ENSHGLG00000003649	TRNT1	98	68.065	Heterocephalus_glaber_female
ENSELUG00000003802	trnt1	93	65.174	ENSHGLG00000000221	-	93	65.174	Heterocephalus_glaber_female
ENSELUG00000003802	trnt1	99	66.900	ENSHGLG00100016421	TRNT1	98	66.900	Heterocephalus_glaber_male
ENSELUG00000003802	trnt1	99	74.533	ENSHCOG00000010618	trnt1	99	74.533	Hippocampus_comes
ENSELUG00000003802	trnt1	100	77.494	ENSIPUG00000000971	trnt1	100	77.494	Ictalurus_punctatus
ENSELUG00000003802	trnt1	98	68.009	ENSSTOG00000000150	TRNT1	92	74.346	Ictidomys_tridecemlineatus
ENSELUG00000003802	trnt1	100	67.285	ENSJJAG00000018561	Trnt1	98	67.285	Jaculus_jaculus
ENSELUG00000003802	trnt1	99	77.986	ENSKMAG00000011307	trnt1	99	77.986	Kryptolebias_marmoratus
ENSELUG00000003802	trnt1	96	74.818	ENSLBEG00000019457	trnt1	97	74.818	Labrus_bergylta
ENSELUG00000003802	trnt1	98	70.000	ENSLACG00000013227	TRNT1	97	70.000	Latimeria_chalumnae
ENSELUG00000003802	trnt1	99	74.651	ENSLOCG00000011105	trnt1	98	74.651	Lepisosteus_oculatus
ENSELUG00000003802	trnt1	99	67.824	ENSLAFG00000023191	TRNT1	99	67.824	Loxodonta_africana
ENSELUG00000003802	trnt1	95	71.253	ENSMFAG00000045113	TRNT1	93	71.253	Macaca_fascicularis
ENSELUG00000003802	trnt1	95	71.253	ENSMMUG00000017983	TRNT1	93	71.253	Macaca_mulatta
ENSELUG00000003802	trnt1	95	71.253	ENSMNEG00000037805	TRNT1	93	71.253	Macaca_nemestrina
ENSELUG00000003802	trnt1	89	72.178	ENSMLEG00000033671	TRNT1	99	72.178	Mandrillus_leucophaeus
ENSELUG00000003802	trnt1	99	80.796	ENSMAMG00000023401	trnt1	99	80.796	Mastacembelus_armatus
ENSELUG00000003802	trnt1	99	78.689	ENSMZEG00005009141	trnt1	99	78.689	Maylandia_zebra
ENSELUG00000003802	trnt1	74	66.562	ENSMGAG00000009971	TRNT1	99	66.562	Meleagris_gallopavo
ENSELUG00000003802	trnt1	99	66.898	ENSMAUG00000020707	Trnt1	99	66.898	Mesocricetus_auratus
ENSELUG00000003802	trnt1	98	69.048	ENSMICG00000016615	TRNT1	97	69.048	Microcebus_murinus
ENSELUG00000003802	trnt1	99	67.757	ENSMOCG00000004539	Trnt1	98	67.757	Microtus_ochrogaster
ENSELUG00000003802	trnt1	99	77.986	ENSMMOG00000010742	trnt1	99	77.986	Mola_mola
ENSELUG00000003802	trnt1	98	68.009	ENSMODG00000004368	TRNT1	97	68.009	Monodelphis_domestica
ENSELUG00000003802	trnt1	99	77.518	ENSMALG00000008376	trnt1	99	77.518	Monopterus_albus
ENSELUG00000003802	trnt1	99	67.749	MGP_CAROLIEiJ_G0028698	Trnt1	97	70.566	Mus_caroli
ENSELUG00000003802	trnt1	99	67.517	ENSMUSG00000013736	Trnt1	99	67.517	Mus_musculus
ENSELUG00000003802	trnt1	99	67.981	MGP_PahariEiJ_G0022449	Trnt1	99	73.000	Mus_pahari
ENSELUG00000003802	trnt1	99	67.749	MGP_SPRETEiJ_G0029726	Trnt1	99	67.749	Mus_spretus
ENSELUG00000003802	trnt1	99	66.898	ENSMPUG00000017017	TRNT1	99	66.898	Mustela_putorius_furo
ENSELUG00000003802	trnt1	90	69.948	ENSMLUG00000011864	TRNT1	100	69.948	Myotis_lucifugus
ENSELUG00000003802	trnt1	99	66.898	ENSNGAG00000000537	Trnt1	99	66.898	Nannospalax_galili
ENSELUG00000003802	trnt1	81	79.598	ENSNBRG00000023606	trnt1	99	79.598	Neolamprologus_brichardi
ENSELUG00000003802	trnt1	95	70.833	ENSNLEG00000003226	TRNT1	94	70.833	Nomascus_leucogenys
ENSELUG00000003802	trnt1	95	68.137	ENSMEUG00000004684	TRNT1	94	68.137	Notamacropus_eugenii
ENSELUG00000003802	trnt1	89	66.580	ENSOPRG00000015067	TRNT1	99	66.580	Ochotona_princeps
ENSELUG00000003802	trnt1	99	66.589	ENSODEG00000007597	TRNT1	99	66.589	Octodon_degus
ENSELUG00000003802	trnt1	99	80.328	ENSONIG00000020273	trnt1	98	80.328	Oreochromis_niloticus
ENSELUG00000003802	trnt1	93	65.920	ENSOANG00000007514	TRNT1	93	65.920	Ornithorhynchus_anatinus
ENSELUG00000003802	trnt1	99	66.745	ENSOCUG00000008580	TRNT1	99	66.745	Oryctolagus_cuniculus
ENSELUG00000003802	trnt1	97	77.512	ENSORLG00000003165	trnt1	99	77.512	Oryzias_latipes
ENSELUG00000003802	trnt1	97	77.804	ENSORLG00020022060	trnt1	99	77.804	Oryzias_latipes_hni
ENSELUG00000003802	trnt1	97	77.088	ENSORLG00015018915	trnt1	98	77.088	Oryzias_latipes_hsok
ENSELUG00000003802	trnt1	95	73.839	ENSOMEG00000003331	trnt1	97	73.839	Oryzias_melastigma
ENSELUG00000003802	trnt1	99	67.133	ENSOARG00000008631	TRNT1	98	67.133	Ovis_aries
ENSELUG00000003802	trnt1	97	68.558	ENSPPAG00000043566	TRNT1	97	68.558	Pan_paniscus
ENSELUG00000003802	trnt1	99	68.224	ENSPPRG00000001327	TRNT1	98	68.224	Panthera_pardus
ENSELUG00000003802	trnt1	99	68.531	ENSPTIG00000011448	TRNT1	98	68.531	Panthera_tigris_altaica
ENSELUG00000003802	trnt1	97	68.558	ENSPTRG00000014564	TRNT1	97	68.558	Pan_troglodytes
ENSELUG00000003802	trnt1	95	71.253	ENSPANG00000025944	TRNT1	93	71.253	Papio_anubis
ENSELUG00000003802	trnt1	100	75.870	ENSPKIG00000020015	trnt1	100	75.870	Paramormyrops_kingsleyae
ENSELUG00000003802	trnt1	92	69.018	ENSPSIG00000017356	TRNT1	99	70.950	Pelodiscus_sinensis
ENSELUG00000003802	trnt1	99	74.707	ENSPMGG00000008888	trnt1	98	74.707	Periophthalmus_magnuspinnatus
ENSELUG00000003802	trnt1	99	67.436	ENSPEMG00000019845	Trnt1	99	67.436	Peromyscus_maniculatus_bairdii
ENSELUG00000003802	trnt1	98	68.009	ENSPCIG00000030436	TRNT1	97	68.009	Phascolarctos_cinereus
ENSELUG00000003802	trnt1	99	79.953	ENSPFOG00000006194	trnt1	98	79.953	Poecilia_formosa
ENSELUG00000003802	trnt1	99	79.953	ENSPLAG00000015623	trnt1	99	82.338	Poecilia_latipinna
ENSELUG00000003802	trnt1	99	79.481	ENSPMEG00000012216	trnt1	99	81.841	Poecilia_mexicana
ENSELUG00000003802	trnt1	99	79.859	ENSPREG00000021470	trnt1	99	79.859	Poecilia_reticulata
ENSELUG00000003802	trnt1	95	70.000	ENSPPYG00000013702	TRNT1	94	70.000	Pongo_abelii
ENSELUG00000003802	trnt1	89	71.802	ENSPCAG00000001951	TRNT1	100	71.802	Procavia_capensis
ENSELUG00000003802	trnt1	99	68.531	ENSPCOG00000022228	TRNT1	98	68.531	Propithecus_coquereli
ENSELUG00000003802	trnt1	89	70.573	ENSPVAG00000008784	TRNT1	100	70.573	Pteropus_vampyrus
ENSELUG00000003802	trnt1	99	78.454	ENSPNYG00000003120	trnt1	99	78.454	Pundamilia_nyererei
ENSELUG00000003802	trnt1	100	77.958	ENSPNAG00000000565	trnt1	100	77.958	Pygocentrus_nattereri
ENSELUG00000003802	trnt1	99	68.298	ENSRNOG00000006432	Trnt1	98	68.298	Rattus_norvegicus
ENSELUG00000003802	trnt1	95	69.363	ENSRBIG00000042632	TRNT1	94	69.363	Rhinopithecus_bieti
ENSELUG00000003802	trnt1	95	70.343	ENSRROG00000036866	TRNT1	94	70.343	Rhinopithecus_roxellana
ENSELUG00000003802	trnt1	95	70.098	ENSSBOG00000021208	TRNT1	94	70.098	Saimiri_boliviensis_boliviensis
ENSELUG00000003802	trnt1	95	68.873	ENSSHAG00000018861	TRNT1	94	68.873	Sarcophilus_harrisii
ENSELUG00000003802	trnt1	99	75.870	ENSSFOG00015020844	trnt1	99	75.870	Scleropages_formosus
ENSELUG00000003802	trnt1	99	80.796	ENSSMAG00000015432	trnt1	97	80.796	Scophthalmus_maximus
ENSELUG00000003802	trnt1	99	80.374	ENSSDUG00000012320	trnt1	100	80.374	Seriola_dumerili
ENSELUG00000003802	trnt1	99	80.140	ENSSLDG00000009325	trnt1	100	80.140	Seriola_lalandi_dorsalis
ENSELUG00000003802	trnt1	56	78.243	ENSSLDG00000016463	-	91	78.243	Seriola_lalandi_dorsalis
ENSELUG00000003802	trnt1	89	71.018	ENSSPUG00000014153	TRNT1	99	71.018	Sphenodon_punctatus
ENSELUG00000003802	trnt1	99	80.235	ENSSPAG00000021005	trnt1	99	80.235	Stegastes_partitus
ENSELUG00000003802	trnt1	99	68.765	ENSSSCG00000011529	TRNT1	98	69.359	Sus_scrofa
ENSELUG00000003802	trnt1	94	68.395	ENSTGUG00000010192	TRNT1	99	68.395	Taeniopygia_guttata
ENSELUG00000003802	trnt1	99	77.986	ENSTRUG00000001088	trnt1	99	77.986	Takifugu_rubripes
ENSELUG00000003802	trnt1	99	78.689	ENSTNIG00000007363	trnt1	98	78.689	Tetraodon_nigroviridis
ENSELUG00000003802	trnt1	61	57.634	ENSTBEG00000006367	TRNT1	86	57.634	Tupaia_belangeri
ENSELUG00000003802	trnt1	99	68.065	ENSTTRG00000007803	TRNT1	98	68.065	Tursiops_truncatus
ENSELUG00000003802	trnt1	99	67.361	ENSUAMG00000022574	TRNT1	99	67.361	Ursus_americanus
ENSELUG00000003802	trnt1	99	67.361	ENSUMAG00000024092	TRNT1	99	67.361	Ursus_maritimus
ENSELUG00000003802	trnt1	99	67.824	ENSVVUG00000012810	TRNT1	99	67.824	Vulpes_vulpes
ENSELUG00000003802	trnt1	96	62.651	ENSXETG00000025091	trnt1	99	63.184	Xenopus_tropicalis
ENSELUG00000003802	trnt1	99	78.923	ENSXCOG00000010150	trnt1	99	78.923	Xiphophorus_couchianus
ENSELUG00000003802	trnt1	99	79.157	ENSXMAG00000002227	trnt1	99	79.157	Xiphophorus_maculatus