EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000003803 (Gene tree)
Gene ID: 105011372
Gene Symbol: trmt13
Alias: ccdc76|fe24e02|wu:fe24e02|zgc:110839
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 3352 bases
Position: chrLG08:8150758-8154109
Accession: 105011372
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000002460	TRM13	PF05206.14	8.2e-85	1	1
ENSELUP00000002460	zf-U11-48K	PF05253.12	1.1e-08	1	1
ENSELUP00000002460	zf-TRM13_CCCH	PF11722.8	1.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000015680	-	1513	XM_010871351	ENSELUP00000002460	469 (aa)	XP_010869653	UPI0005765929

Gene Model

Click here to download ENSELUG00000003803's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000003803's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000003803	trmt13	98	56.652	ENSG00000122435	TRMT13	96	56.835	Homo_sapiens
ENSELUG00000003803	trmt13	98	53.521	ENSAPOG00000015131	trmt13	99	53.693	Acanthochromis_polyacanthus
ENSELUG00000003803	trmt13	99	55.765	ENSAMEG00000008917	TRMT13	98	55.789	Ailuropoda_melanoleuca
ENSELUG00000003803	trmt13	99	55.319	ENSACIG00000005804	trmt13	95	55.724	Amphilophus_citrinellus
ENSELUG00000003803	trmt13	98	53.908	ENSAOCG00000023585	trmt13	99	53.785	Amphiprion_ocellaris
ENSELUG00000003803	trmt13	98	53.908	ENSAPEG00000004025	trmt13	99	53.785	Amphiprion_percula
ENSELUG00000003803	trmt13	99	55.814	ENSATEG00000006597	trmt13	98	55.180	Anabas_testudineus
ENSELUG00000003803	trmt13	89	57.277	ENSAPLG00000014924	TRMT13	99	57.277	Anas_platyrhynchos
ENSELUG00000003803	trmt13	98	54.818	ENSACAG00000003498	TRMT13	98	54.818	Anolis_carolinensis
ENSELUG00000003803	trmt13	98	55.889	ENSANAG00000019525	TRMT13	96	55.769	Aotus_nancymaae
ENSELUG00000003803	trmt13	98	58.244	ENSACLG00000020018	trmt13	99	57.602	Astatotilapia_calliptera
ENSELUG00000003803	trmt13	99	61.885	ENSAMXG00000017963	trmt13	99	63.202	Astyanax_mexicanus
ENSELUG00000003803	trmt13	99	55.839	ENSBTAG00000015781	TRMT13	97	55.319	Bos_taurus
ENSELUG00000003803	trmt13	98	55.246	ENSCJAG00000000200	TRMT13	88	73.077	Callithrix_jacchus
ENSELUG00000003803	trmt13	65	53.943	ENSCAFG00000020021	TRMT13	97	53.333	Canis_familiaris
ENSELUG00000003803	trmt13	55	64.093	ENSCAFG00020011572	TRMT13	90	64.093	Canis_lupus_dingo
ENSELUG00000003803	trmt13	99	54.989	ENSCHIG00000015395	TRMT13	97	54.681	Capra_hircus
ENSELUG00000003803	trmt13	98	55.224	ENSTSYG00000010811	TRMT13	97	60.204	Carlito_syrichta
ENSELUG00000003803	trmt13	76	40.164	ENSCAPG00000009085	TRMT13	90	45.238	Cavia_aperea
ENSELUG00000003803	trmt13	99	56.263	ENSCPOG00000000694	TRMT13	98	55.324	Cavia_porcellus
ENSELUG00000003803	trmt13	98	55.675	ENSCCAG00000023772	TRMT13	96	55.556	Cebus_capucinus
ENSELUG00000003803	trmt13	98	56.438	ENSCATG00000033556	TRMT13	96	55.983	Cercocebus_atys
ENSELUG00000003803	trmt13	89	56.028	ENSCLAG00000008220	TRMT13	98	56.057	Chinchilla_lanigera
ENSELUG00000003803	trmt13	98	56.838	ENSCSAG00000001506	TRMT13	96	56.383	Chlorocebus_sabaeus
ENSELUG00000003803	trmt13	99	54.661	ENSCPBG00000026671	TRMT13	97	54.661	Chrysemys_picta_bellii
ENSELUG00000003803	trmt13	98	56.652	ENSCANG00000034659	TRMT13	96	56.197	Colobus_angolensis_palliatus
ENSELUG00000003803	trmt13	99	54.832	ENSCGRG00001021601	Trmt13	96	54.832	Cricetulus_griseus_chok1gshd
ENSELUG00000003803	trmt13	52	48.846	ENSCGRG00000000093	-	96	48.846	Cricetulus_griseus_crigri
ENSELUG00000003803	trmt13	99	53.780	ENSCSEG00000000591	trmt13	99	53.348	Cynoglossus_semilaevis
ENSELUG00000003803	trmt13	98	54.280	ENSCVAG00000017342	trmt13	94	53.862	Cyprinodon_variegatus
ENSELUG00000003803	trmt13	99	65.525	ENSDARG00000102846	trmt13	98	65.310	Danio_rerio
ENSELUG00000003803	trmt13	57	61.397	ENSDNOG00000001710	TRMT13	83	61.397	Dasypus_novemcinctus
ENSELUG00000003803	trmt13	99	55.556	ENSDORG00000015808	Trmt13	97	55.556	Dipodomys_ordii
ENSELUG00000003803	trmt13	97	33.333	FBgn0037435	CG18048	95	33.612	Drosophila_melanogaster
ENSELUG00000003803	trmt13	99	47.071	ENSETEG00000005819	TRMT13	98	46.973	Echinops_telfairi
ENSELUG00000003803	trmt13	96	45.217	ENSEBUG00000014444	trmt13	96	44.783	Eptatretus_burgeri
ENSELUG00000003803	trmt13	99	55.789	ENSEASG00005015918	TRMT13	98	55.485	Equus_asinus_asinus
ENSELUG00000003803	trmt13	99	55.789	ENSECAG00000022626	TRMT13	98	55.368	Equus_caballus
ENSELUG00000003803	trmt13	75	57.143	ENSEEUG00000000294	TRMT13	74	57.143	Erinaceus_europaeus
ENSELUG00000003803	trmt13	98	56.009	ENSFCAG00000030618	TRMT13	96	56.115	Felis_catus
ENSELUG00000003803	trmt13	97	56.427	ENSFALG00000002424	TRMT13	95	56.209	Ficedula_albicollis
ENSELUG00000003803	trmt13	98	55.579	ENSFDAG00000006342	TRMT13	95	55.342	Fukomys_damarensis
ENSELUG00000003803	trmt13	82	57.252	ENSFHEG00000022954	trmt13	96	57.761	Fundulus_heteroclitus
ENSELUG00000003803	trmt13	96	54.585	ENSGMOG00000013223	trmt13	100	55.752	Gadus_morhua
ENSELUG00000003803	trmt13	97	54.741	ENSGALG00000005290	TRMT13	96	54.526	Gallus_gallus
ENSELUG00000003803	trmt13	82	54.684	ENSGAFG00000001577	trmt13	83	54.684	Gambusia_affinis
ENSELUG00000003803	trmt13	99	57.356	ENSGACG00000013428	trmt13	99	57.356	Gasterosteus_aculeatus
ENSELUG00000003803	trmt13	99	53.684	ENSGAGG00000023303	TRMT13	97	61.481	Gopherus_agassizii
ENSELUG00000003803	trmt13	98	56.867	ENSGGOG00000005616	TRMT13	96	56.410	Gorilla_gorilla
ENSELUG00000003803	trmt13	98	57.725	ENSHBUG00000007754	trmt13	99	57.082	Haplochromis_burtoni
ENSELUG00000003803	trmt13	99	55.274	ENSHGLG00000002164	TRMT13	97	55.462	Heterocephalus_glaber_female
ENSELUG00000003803	trmt13	99	55.274	ENSHGLG00100001618	TRMT13	97	55.462	Heterocephalus_glaber_male
ENSELUG00000003803	trmt13	98	49.784	ENSHCOG00000020553	trmt13	98	49.138	Hippocampus_comes
ENSELUG00000003803	trmt13	99	63.871	ENSIPUG00000024787	trmt13	99	63.441	Ictalurus_punctatus
ENSELUG00000003803	trmt13	98	55.889	ENSSTOG00000013483	TRMT13	96	55.556	Ictidomys_tridecemlineatus
ENSELUG00000003803	trmt13	98	55.675	ENSJJAG00000018012	Trmt13	97	55.675	Jaculus_jaculus
ENSELUG00000003803	trmt13	64	56.954	ENSKMAG00000007639	trmt13	92	56.954	Kryptolebias_marmoratus
ENSELUG00000003803	trmt13	98	55.932	ENSLBEG00000020238	trmt13	99	55.297	Labrus_bergylta
ENSELUG00000003803	trmt13	98	57.634	ENSLACG00000013153	TRMT13	97	56.989	Latimeria_chalumnae
ENSELUG00000003803	trmt13	100	61.311	ENSLOCG00000000418	trmt13	99	61.458	Lepisosteus_oculatus
ENSELUG00000003803	trmt13	77	53.763	ENSLAFG00000002383	TRMT13	99	54.178	Loxodonta_africana
ENSELUG00000003803	trmt13	98	56.438	ENSMFAG00000034681	TRMT13	96	56.652	Macaca_fascicularis
ENSELUG00000003803	trmt13	98	56.438	ENSMMUG00000004243	TRMT13	96	56.652	Macaca_mulatta
ENSELUG00000003803	trmt13	98	56.438	ENSMNEG00000036102	TRMT13	96	56.652	Macaca_nemestrina
ENSELUG00000003803	trmt13	98	56.867	ENSMLEG00000034258	TRMT13	96	56.410	Mandrillus_leucophaeus
ENSELUG00000003803	trmt13	99	56.383	ENSMAMG00000016597	trmt13	98	55.957	Mastacembelus_armatus
ENSELUG00000003803	trmt13	98	58.030	ENSMZEG00005020959	trmt13	99	57.388	Maylandia_zebra
ENSELUG00000003803	trmt13	90	56.047	ENSMGAG00000006970	TRMT13	99	56.047	Meleagris_gallopavo
ENSELUG00000003803	trmt13	99	54.873	ENSMAUG00000010448	Trmt13	97	55.180	Mesocricetus_auratus
ENSELUG00000003803	trmt13	99	55.462	ENSMICG00000005283	TRMT13	94	61.765	Microcebus_murinus
ENSELUG00000003803	trmt13	99	55.485	ENSMOCG00000019914	Trmt13	97	55.085	Microtus_ochrogaster
ENSELUG00000003803	trmt13	56	53.846	ENSMMOG00000007762	trmt13	90	53.846	Mola_mola
ENSELUG00000003803	trmt13	98	53.459	ENSMODG00000003646	TRMT13	96	53.249	Monodelphis_domestica
ENSELUG00000003803	trmt13	98	55.098	ENSMALG00000020965	trmt13	97	54.447	Monopterus_albus
ENSELUG00000003803	trmt13	99	56.000	MGP_CAROLIEiJ_G0025568	Trmt13	94	64.286	Mus_caroli
ENSELUG00000003803	trmt13	99	55.789	ENSMUSG00000033439	Trmt13	94	64.286	Mus_musculus
ENSELUG00000003803	trmt13	99	55.579	MGP_PahariEiJ_G0027014	Trmt13	97	59.011	Mus_pahari
ENSELUG00000003803	trmt13	99	56.000	MGP_SPRETEiJ_G0026518	Trmt13	94	64.286	Mus_spretus
ENSELUG00000003803	trmt13	79	53.763	ENSMPUG00000002078	-	98	53.226	Mustela_putorius_furo
ENSELUG00000003803	trmt13	99	54.852	ENSMLUG00000002124	TRMT13	98	54.852	Myotis_lucifugus
ENSELUG00000003803	trmt13	98	52.854	ENSNBRG00000006783	trmt13	97	52.442	Neolamprologus_brichardi
ENSELUG00000003803	trmt13	98	56.223	ENSNLEG00000035917	TRMT13	96	55.769	Nomascus_leucogenys
ENSELUG00000003803	trmt13	52	52.033	ENSMEUG00000013346	-	98	52.033	Notamacropus_eugenii
ENSELUG00000003803	trmt13	66	67.442	ENSOPRG00000012048	TRMT13	65	67.442	Ochotona_princeps
ENSELUG00000003803	trmt13	98	56.448	ENSONIG00000004574	trmt13	99	55.814	Oreochromis_niloticus
ENSELUG00000003803	trmt13	90	54.253	ENSOANG00000012057	TRMT13	98	54.253	Ornithorhynchus_anatinus
ENSELUG00000003803	trmt13	99	54.757	ENSOCUG00000023095	TRMT13	98	54.237	Oryctolagus_cuniculus
ENSELUG00000003803	trmt13	98	52.137	ENSORLG00000003320	trmt13	99	51.496	Oryzias_latipes
ENSELUG00000003803	trmt13	98	52.155	ENSORLG00020005972	trmt13	97	52.034	Oryzias_latipes_hni
ENSELUG00000003803	trmt13	98	56.531	ENSORLG00015002270	trmt13	99	55.889	Oryzias_latipes_hsok
ENSELUG00000003803	trmt13	98	57.634	ENSOMEG00000006724	trmt13	94	56.989	Oryzias_melastigma
ENSELUG00000003803	trmt13	99	56.237	ENSOGAG00000005618	TRMT13	95	55.975	Otolemur_garnettii
ENSELUG00000003803	trmt13	99	54.989	ENSOARG00000017983	TRMT13	97	54.681	Ovis_aries
ENSELUG00000003803	trmt13	98	56.438	ENSPPAG00000043736	TRMT13	96	55.983	Pan_paniscus
ENSELUG00000003803	trmt13	98	55.769	ENSPPRG00000003424	TRMT13	96	56.115	Panthera_pardus
ENSELUG00000003803	trmt13	98	55.769	ENSPTIG00000018598	TRMT13	96	56.115	Panthera_tigris_altaica
ENSELUG00000003803	trmt13	98	56.438	ENSPTRG00000001001	TRMT13	96	55.983	Pan_troglodytes
ENSELUG00000003803	trmt13	98	56.652	ENSPANG00000007598	TRMT13	96	56.197	Papio_anubis
ENSELUG00000003803	trmt13	99	64.086	ENSPKIG00000001514	trmt13	99	63.656	Paramormyrops_kingsleyae
ENSELUG00000003803	trmt13	88	53.081	ENSPSIG00000012703	TRMT13	99	53.333	Pelodiscus_sinensis
ENSELUG00000003803	trmt13	98	53.996	ENSPMGG00000013298	trmt13	94	53.333	Periophthalmus_magnuspinnatus
ENSELUG00000003803	trmt13	99	55.297	ENSPEMG00000000275	Trmt13	97	55.297	Peromyscus_maniculatus_bairdii
ENSELUG00000003803	trmt13	97	44.581	ENSPMAG00000000823	trmt13	98	43.763	Petromyzon_marinus
ENSELUG00000003803	trmt13	99	53.638	ENSPCIG00000007699	TRMT13	97	54.237	Phascolarctos_cinereus
ENSELUG00000003803	trmt13	97	55.240	ENSPFOG00000008675	trmt13	95	55.098	Poecilia_formosa
ENSELUG00000003803	trmt13	98	54.565	ENSPLAG00000009709	trmt13	100	54.430	Poecilia_latipinna
ENSELUG00000003803	trmt13	98	54.140	ENSPMEG00000022954	trmt13	100	54.008	Poecilia_mexicana
ENSELUG00000003803	trmt13	82	55.725	ENSPREG00000005645	trmt13	91	55.636	Poecilia_reticulata
ENSELUG00000003803	trmt13	99	56.540	ENSPPYG00000001120	TRMT13	97	56.092	Pongo_abelii
ENSELUG00000003803	trmt13	99	55.789	ENSPCAG00000002340	TRMT13	97	55.789	Procavia_capensis
ENSELUG00000003803	trmt13	99	54.737	ENSPCOG00000017984	TRMT13	93	61.386	Propithecus_coquereli
ENSELUG00000003803	trmt13	99	55.158	ENSPVAG00000017430	TRMT13	98	55.158	Pteropus_vampyrus
ENSELUG00000003803	trmt13	98	55.180	ENSPNYG00000013690	trmt13	99	54.545	Pundamilia_nyererei
ENSELUG00000003803	trmt13	99	64.882	ENSPNAG00000022130	trmt13	99	64.378	Pygocentrus_nattereri
ENSELUG00000003803	trmt13	99	56.568	ENSRNOG00000015140	Trmt13	94	55.932	Rattus_norvegicus
ENSELUG00000003803	trmt13	98	56.652	ENSRBIG00000037686	TRMT13	96	56.197	Rhinopithecus_bieti
ENSELUG00000003803	trmt13	98	56.652	ENSRROG00000044057	TRMT13	96	56.197	Rhinopithecus_roxellana
ENSELUG00000003803	trmt13	98	55.889	ENSSBOG00000026541	TRMT13	96	55.769	Saimiri_boliviensis_boliviensis
ENSELUG00000003803	trmt13	91	54.214	ENSSHAG00000005213	TRMT13	96	53.881	Sarcophilus_harrisii
ENSELUG00000003803	trmt13	99	63.362	ENSSFOG00015017560	trmt13	98	63.948	Scleropages_formosus
ENSELUG00000003803	trmt13	99	55.180	ENSSMAG00000014592	trmt13	97	54.334	Scophthalmus_maximus
ENSELUG00000003803	trmt13	99	56.576	ENSSDUG00000015508	trmt13	97	55.602	Seriola_dumerili
ENSELUG00000003803	trmt13	99	56.458	ENSSLDG00000019060	trmt13	97	55.115	Seriola_lalandi_dorsalis
ENSELUG00000003803	trmt13	97	50.213	ENSSARG00000010344	TRMT13	96	49.356	Sorex_araneus
ENSELUG00000003803	trmt13	97	55.022	ENSSPUG00000016339	TRMT13	98	54.803	Sphenodon_punctatus
ENSELUG00000003803	trmt13	98	57.996	ENSSPAG00000011922	trmt13	99	57.415	Stegastes_partitus
ENSELUG00000003803	trmt13	99	55.556	ENSSSCG00000006869	TRMT13	98	55.789	Sus_scrofa
ENSELUG00000003803	trmt13	97	55.991	ENSTGUG00000005253	TRMT13	98	55.991	Taeniopygia_guttata
ENSELUG00000003803	trmt13	97	54.430	ENSTRUG00000008400	trmt13	98	53.040	Takifugu_rubripes
ENSELUG00000003803	trmt13	64	59.494	ENSTBEG00000008911	TRMT13	75	59.494	Tupaia_belangeri
ENSELUG00000003803	trmt13	99	53.445	ENSUAMG00000017251	TRMT13	98	53.895	Ursus_americanus
ENSELUG00000003803	trmt13	99	55.021	ENSUMAG00000007901	TRMT13	98	55.581	Ursus_maritimus
ENSELUG00000003803	trmt13	77	69.091	ENSVPAG00000001034	TRMT13	84	69.091	Vicugna_pacos
ENSELUG00000003803	trmt13	98	55.957	ENSVVUG00000021996	TRMT13	96	55.556	Vulpes_vulpes
ENSELUG00000003803	trmt13	98	53.159	ENSXETG00000013204	trmt13	97	52.391	Xenopus_tropicalis
ENSELUG00000003803	trmt13	98	53.715	ENSXMAG00000010765	trmt13	100	52.621	Xiphophorus_maculatus