EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000003805 (Gene tree)
Gene ID: 105019427
Gene Symbol: rab18a
Alias: fc62e07|wu:fc62e07|zgc:77145
Full Name: RAB18%2C member RAS oncogene family
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 18548 bases
Position: chrLG21:6753995-6772542
Accession: 105019427
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000002461	MMR_HSR1	PF01926.23	8.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000015681	-	3458	XM_010885618	ENSELUP00000002461	205 (aa)	XP_010883920	UPI000575F47F

Gene Model

Click here to download ENSELUG00000003805's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000003805's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000003805	rab18a	90	40.541	ENSELUG00000013436	rab5ab	82	40.541
ENSELUG00000003805	rab18a	90	31.183	ENSELUG00000003058	KRAS	98	31.183
ENSELUG00000003805	rab18a	79	32.121	ENSELUG00000013666	si:cabz01085950.1	81	32.121
ENSELUG00000003805	rab18a	93	34.021	ENSELUG00000016622	rab9a	97	34.021
ENSELUG00000003805	rab18a	84	33.523	ENSELUG00000005597	rab34b	68	33.523
ENSELUG00000003805	rab18a	82	50.000	ENSELUG00000022997	rab30	84	50.000
ENSELUG00000003805	rab18a	81	32.530	ENSELUG00000004712	HRAS	87	32.530
ENSELUG00000003805	rab18a	81	44.643	ENSELUG00000020012	rab15	78	44.643
ENSELUG00000003805	rab18a	80	48.171	ENSELUG00000009832	rab14	76	48.171
ENSELUG00000003805	rab18a	85	31.285	ENSELUG00000018367	rheb	93	31.285
ENSELUG00000003805	rab18a	87	38.547	ENSELUG00000008876	rab6a	84	38.547
ENSELUG00000003805	rab18a	83	36.628	ENSELUG00000020788	rab23	72	36.628
ENSELUG00000003805	rab18a	79	31.325	ENSELUG00000019264	dnajc27	61	31.325
ENSELUG00000003805	rab18a	96	36.181	ENSELUG00000001257	rab6ba	95	36.181
ENSELUG00000003805	rab18a	83	39.884	ENSELUG00000013957	-	81	39.884
ENSELUG00000003805	rab18a	83	38.728	ENSELUG00000005304	rab39ba	81	38.728
ENSELUG00000003805	rab18a	83	39.766	ENSELUG00000022470	rab6bb	80	39.766
ENSELUG00000003805	rab18a	95	33.990	ENSELUG00000006539	RAB7A	96	33.990
ENSELUG00000003805	rab18a	83	47.674	ENSELUG00000023972	rab35	100	42.365
ENSELUG00000003805	rab18a	95	34.483	ENSELUG00000016682	-	96	34.483
ENSELUG00000003805	rab18a	79	45.679	ENSELUG00000020948	-	89	52.137
ENSELUG00000003805	rab18a	87	43.575	ENSELUG00000010439	-	78	43.575
ENSELUG00000003805	rab18a	79	44.444	ENSELUG00000006604	rab25a	76	44.444
ENSELUG00000003805	rab18a	82	34.706	ENSELUG00000017558	mras	83	34.104
ENSELUG00000003805	rab18a	77	41.509	ENSELUG00000023120	-	74	41.509
ENSELUG00000003805	rab18a	93	35.052	ENSELUG00000021199	RAB9A	89	35.052
ENSELUG00000003805	rab18a	79	45.679	ENSELUG00000000916	-	83	52.137
ENSELUG00000003805	rab18a	89	42.935	ENSELUG00000023247	si:dkey-16l2.16	85	42.935
ENSELUG00000003805	rab18a	73	36.000	ENSELUG00000008604	rras2	82	35.542
ENSELUG00000003805	rab18a	71	44.898	ENSELUG00000013219	rab33a	62	44.898
ENSELUG00000003805	rab18a	79	51.235	ENSELUG00000012166	RAB1A	76	51.235
ENSELUG00000003805	rab18a	82	42.604	ENSELUG00000005989	RAB15	77	42.604
ENSELUG00000003805	rab18a	79	45.679	ENSELUG00000021148	rab11bb	74	45.679
ENSELUG00000003805	rab18a	84	38.857	ENSELUG00000010345	rab42a	81	38.857
ENSELUG00000003805	rab18a	92	47.423	ENSELUG00000023964	rab2a	92	47.208
ENSELUG00000003805	rab18a	79	37.725	ENSELUG00000004378	rab9b	82	37.725
ENSELUG00000003805	rab18a	79	49.383	ENSELUG00000023815	-	80	49.383
ENSELUG00000003805	rab18a	92	42.408	ENSELUG00000014785	rab4a	89	42.408
ENSELUG00000003805	rab18a	79	43.827	ENSELUG00000012060	rab25b	76	43.827
ENSELUG00000003805	rab18a	91	40.625	ENSELUG00000012801	rab13	93	40.625
ENSELUG00000003805	rab18a	93	46.154	ENSELUG00000015413	rab1ab	97	46.154
ENSELUG00000003805	rab18a	79	45.062	ENSELUG00000002999	rab11a	80	52.137
ENSELUG00000003805	rab18a	79	46.951	ENSELUG00000007123	rab12	68	46.951
ENSELUG00000003805	rab18a	88	30.811	ENSELUG00000006480	rheb	93	30.811
ENSELUG00000003805	rab18a	79	45.062	ENSELUG00000012035	rab11al	75	45.062
ENSELUG00000003805	rab18a	95	36.364	ENSELUG00000000175	zgc:100918	96	36.364
ENSELUG00000003805	rab18a	99	87.317	ENSELUG00000016450	rab18b	99	87.317
ENSELUG00000003805	rab18a	71	43.537	ENSELUG00000002575	rab33ba	70	41.420
ENSELUG00000003805	rab18a	83	30.286	ENSELUG00000016028	rhebl1	92	30.286
ENSELUG00000003805	rab18a	94	38.889	ENSELUG00000015343	rab22a	99	38.889
ENSELUG00000003805	rab18a	81	49.102	ENSELUG00000012428	-	80	50.000
ENSELUG00000003805	rab18a	91	46.524	ENSELUG00000011680	zgc:171927	87	46.524
ENSELUG00000003805	rab18a	71	42.138	ENSELUG00000011352	-	63	41.975
ENSELUG00000003805	rab18a	79	45.062	ENSELUG00000019240	-	83	45.062
ENSELUG00000003805	rab18a	80	36.364	ENSELUG00000018921	rab36	67	36.364
ENSELUG00000003805	rab18a	94	37.755	ENSELUG00000006462	rab5aa	90	37.755
ENSELUG00000003805	rab18a	80	48.171	ENSELUG00000013571	-	76	48.171
ENSELUG00000003805	rab18a	96	40.201	ENSELUG00000018516	rab5c	91	40.909
ENSELUG00000003805	rab18a	83	34.104	ENSELUG00000005090	si:ch73-116o1.2	72	34.104

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000003805	rab18a	100	92.683	ENSAPOG00000010760	rab18a	100	92.683	Acanthochromis_polyacanthus
ENSELUG00000003805	rab18a	100	80.000	ENSACIG00000009617	rab18a	100	80.000	Amphilophus_citrinellus
ENSELUG00000003805	rab18a	100	92.195	ENSAOCG00000016233	rab18a	100	92.195	Amphiprion_ocellaris
ENSELUG00000003805	rab18a	100	92.195	ENSAPEG00000005392	rab18a	100	92.195	Amphiprion_percula
ENSELUG00000003805	rab18a	100	93.171	ENSATEG00000021911	rab18a	100	93.171	Anabas_testudineus
ENSELUG00000003805	rab18a	100	89.268	ENSACAG00000005463	-	100	89.268	Anolis_carolinensis
ENSELUG00000003805	rab18a	100	91.707	ENSACLG00000011484	rab18a	100	91.707	Astatotilapia_calliptera
ENSELUG00000003805	rab18a	96	72.589	ENSCPBG00000027619	-	98	72.589	Chrysemys_picta_bellii
ENSELUG00000003805	rab18a	100	89.806	ENSCPBG00000015839	-	100	89.806	Chrysemys_picta_bellii
ENSELUG00000003805	rab18a	97	76.000	ENSCING00000006838	-	99	76.000	Ciona_intestinalis
ENSELUG00000003805	rab18a	97	74.000	ENSCSAVG00000010348	-	99	74.000	Ciona_savignyi
ENSELUG00000003805	rab18a	100	93.171	ENSCSEG00000011816	rab18a	100	93.171	Cynoglossus_semilaevis
ENSELUG00000003805	rab18a	93	91.623	ENSCVAG00000015451	rab18a	100	90.732	Cyprinodon_variegatus
ENSELUG00000003805	rab18a	100	81.951	ENSDARG00000055291	rab18a	100	81.951	Danio_rerio
ENSELUG00000003805	rab18a	93	92.147	ENSFHEG00000019455	rab18a	100	91.220	Fundulus_heteroclitus
ENSELUG00000003805	rab18a	93	91.099	ENSGAFG00000002790	rab18a	100	89.268	Gambusia_affinis
ENSELUG00000003805	rab18a	100	89.320	ENSGAGG00000015642	-	100	89.320	Gopherus_agassizii
ENSELUG00000003805	rab18a	100	91.707	ENSHBUG00000001518	rab18a	100	91.707	Haplochromis_burtoni
ENSELUG00000003805	rab18a	99	92.647	ENSLBEG00000005861	rab18a	95	92.647	Labrus_bergylta
ENSELUG00000003805	rab18a	94	93.229	ENSLACG00000009310	rab18a	100	90.777	Latimeria_chalumnae
ENSELUG00000003805	rab18a	100	92.195	ENSLOCG00000007491	rab18a	100	92.195	Lepisosteus_oculatus
ENSELUG00000003805	rab18a	100	92.195	ENSMAMG00000014320	rab18a	100	92.195	Mastacembelus_armatus
ENSELUG00000003805	rab18a	100	91.220	ENSMZEG00005017235	rab18a	100	91.220	Maylandia_zebra
ENSELUG00000003805	rab18a	100	93.659	ENSMALG00000009813	rab18a	100	93.659	Monopterus_albus
ENSELUG00000003805	rab18a	100	91.707	ENSNBRG00000013507	rab18a	100	91.707	Neolamprologus_brichardi
ENSELUG00000003805	rab18a	93	90.576	ENSORLG00000004624	rab18a	100	90.244	Oryzias_latipes
ENSELUG00000003805	rab18a	93	91.099	ENSORLG00020008333	rab18a	100	90.732	Oryzias_latipes_hni
ENSELUG00000003805	rab18a	93	90.576	ENSORLG00015004739	rab18a	100	90.244	Oryzias_latipes_hsok
ENSELUG00000003805	rab18a	93	90.576	ENSOMEG00000020605	rab18a	100	89.756	Oryzias_melastigma
ENSELUG00000003805	rab18a	100	90.244	ENSPKIG00000009825	rab18a	100	90.244	Paramormyrops_kingsleyae
ENSELUG00000003805	rab18a	100	89.756	ENSPMGG00000020409	-	100	89.756	Periophthalmus_magnuspinnatus
ENSELUG00000003805	rab18a	93	91.623	ENSPFOG00000007571	rab18a	100	89.756	Poecilia_formosa
ENSELUG00000003805	rab18a	93	91.623	ENSPLAG00000010104	rab18a	100	89.756	Poecilia_latipinna
ENSELUG00000003805	rab18a	93	91.623	ENSPMEG00000013085	rab18a	100	89.756	Poecilia_mexicana
ENSELUG00000003805	rab18a	93	91.623	ENSPREG00000005923	rab18a	83	89.756	Poecilia_reticulata
ENSELUG00000003805	rab18a	100	91.707	ENSPNYG00000007064	rab18a	100	91.707	Pundamilia_nyererei
ENSELUG00000003805	rab18a	99	82.759	ENSPNAG00000011548	rab18a	100	82.759	Pygocentrus_nattereri
ENSELUG00000003805	rab18a	100	94.634	ENSSFOG00015017444	rab18a	84	94.634	Scleropages_formosus
ENSELUG00000003805	rab18a	93	91.667	ENSSMAG00000002969	rab18a	100	91.262	Scophthalmus_maximus
ENSELUG00000003805	rab18a	93	94.764	ENSSDUG00000003823	rab18a	100	94.146	Seriola_dumerili
ENSELUG00000003805	rab18a	93	94.764	ENSSLDG00000006977	rab18a	100	94.146	Seriola_lalandi_dorsalis
ENSELUG00000003805	rab18a	94	92.188	ENSSPUG00000017677	-	100	89.806	Sphenodon_punctatus
ENSELUG00000003805	rab18a	100	89.268	ENSTRUG00000004984	rab18a	100	89.268	Takifugu_rubripes
ENSELUG00000003805	rab18a	100	89.320	ENSUMAG00000015574	-	100	89.320	Ursus_maritimus
ENSELUG00000003805	rab18a	100	91.262	ENSXETG00000004556	rab18	100	91.262	Xenopus_tropicalis
ENSELUG00000003805	rab18a	93	91.623	ENSXMAG00000024122	rab18a	100	89.756	Xiphophorus_maculatus