EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000003878 (Gene tree)
Gene ID: 105019775
Gene Symbol: -
Alias: -
Full Name: SON DNA binding protein
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 16036 bases
Position: chrLG22:13005254-13021289
Accession: 105019775
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000002491	dsrm	PF00035.26	6.1e-12	1	1
ENSELUP00000002491	DND1_DSRM	PF14709.7	9.4e-13	1	1
ENSELUP00000002504	DND1_DSRM	PF14709.7	1.6e-08	1	1
ENSELUP00000002504	G-patch	PF01585.23	1.7e-12	1	1
ENSELUP00000002491	G-patch	PF01585.23	4.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000015602	-	1029	-	ENSELUP00000002504	342 (aa)	-	-
ENSELUT00000015627	-	4047	XM_010886179	ENSELUP00000002491	1163 (aa)	XP_010884481	UPI0005769641

Gene Model

Click here to download ENSELUG00000003878's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000003878's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000003878	-	73	61.832	ENSG00000159140	SON	82	64.000	Homo_sapiens
ENSELUG00000003878	-	68	68.345	ENSAPOG00000000559	-	58	67.901	Acanthochromis_polyacanthus
ENSELUG00000003878	-	73	67.029	ENSACIG00000017870	-	100	77.358	Amphilophus_citrinellus
ENSELUG00000003878	-	68	67.616	ENSAOCG00000004262	-	58	66.783	Amphiprion_ocellaris
ENSELUG00000003878	-	70	66.202	ENSAPEG00000009136	-	58	66.958	Amphiprion_percula
ENSELUG00000003878	-	68	70.480	ENSATEG00000012732	-	81	69.665	Anabas_testudineus
ENSELUG00000003878	-	70	68.293	ENSAPLG00000008908	-	79	54.568	Anas_platyrhynchos
ENSELUG00000003878	-	68	66.805	ENSACAG00000004681	-	71	52.603	Anolis_carolinensis
ENSELUG00000003878	-	78	59.928	ENSANAG00000035426	SON	72	51.482	Aotus_nancymaae
ENSELUG00000003878	-	68	68.214	ENSACLG00000007065	-	58	67.311	Astatotilapia_calliptera
ENSELUG00000003878	-	69	73.109	ENSACLG00000007098	-	80	84.492	Astatotilapia_calliptera
ENSELUG00000003878	-	78	59.928	ENSCJAG00000046975	SON	72	51.482	Callithrix_jacchus
ENSELUG00000003878	-	78	59.928	ENSCAFG00020025305	SON	72	51.482	Canis_lupus_dingo
ENSELUG00000003878	-	78	59.928	ENSTSYG00000008371	SON	72	51.213	Carlito_syrichta
ENSELUG00000003878	-	78	59.928	ENSCPOG00000024278	SON	72	51.482	Cavia_porcellus
ENSELUG00000003878	-	78	59.928	ENSCCAG00000030234	SON	72	51.482	Cebus_capucinus
ENSELUG00000003878	-	78	59.928	ENSCATG00000029812	SON	73	51.233	Cercocebus_atys
ENSELUG00000003878	-	78	59.928	ENSCLAG00000011776	SON	72	51.482	Chinchilla_lanigera
ENSELUG00000003878	-	68	41.322	ENSCING00000007049	-	81	35.450	Ciona_intestinalis
ENSELUG00000003878	-	78	59.928	ENSCANG00000025986	SON	73	51.233	Colobus_angolensis_palliatus
ENSELUG00000003878	-	78	59.928	ENSCGRG00001016220	Son	72	51.482	Cricetulus_griseus_chok1gshd
ENSELUG00000003878	-	78	59.928	ENSCGRG00000015260	Son	77	51.482	Cricetulus_griseus_crigri
ENSELUG00000003878	-	78	59.928	ENSDORG00000028617	-	72	51.482	Dipodomys_ordii
ENSELUG00000003878	-	56	37.104	FBgn0037716	CG8273	54	31.198	Drosophila_melanogaster
ENSELUG00000003878	-	78	59.928	ENSFCAG00000028680	-	72	51.482	Felis_catus
ENSELUG00000003878	-	70	68.421	ENSFALG00000002365	-	84	55.062	Ficedula_albicollis
ENSELUG00000003878	-	78	59.928	ENSFDAG00000019128	SON	72	51.482	Fukomys_damarensis
ENSELUG00000003878	-	84	67.626	ENSFHEG00000019700	-	58	65.278	Fundulus_heteroclitus
ENSELUG00000003878	-	73	66.929	ENSGALG00000052354	-	72	54.144	Gallus_gallus
ENSELUG00000003878	-	86	67.133	ENSGAFG00000016463	-	57	65.554	Gambusia_affinis
ENSELUG00000003878	-	78	59.928	ENSGGOG00000010481	SON	72	51.482	Gorilla_gorilla
ENSELUG00000003878	-	68	68.214	ENSHBUG00000001964	-	61	67.430	Haplochromis_burtoni
ENSELUG00000003878	-	78	59.928	ENSHGLG00000010432	SON	72	51.482	Heterocephalus_glaber_female
ENSELUG00000003878	-	78	59.928	ENSSTOG00000020593	SON	72	51.482	Ictidomys_tridecemlineatus
ENSELUG00000003878	-	78	59.928	ENSJJAG00000013491	-	72	51.482	Jaculus_jaculus
ENSELUG00000003878	-	68	69.286	ENSLBEG00000008600	-	56	69.596	Labrus_bergylta
ENSELUG00000003878	-	70	69.685	ENSLACG00000013385	-	73	58.168	Latimeria_chalumnae
ENSELUG00000003878	-	70	78.367	ENSLOCG00000011021	-	69	67.797	Lepisosteus_oculatus
ENSELUG00000003878	-	78	59.928	ENSMFAG00000034427	SON	73	51.233	Macaca_fascicularis
ENSELUG00000003878	-	78	59.928	ENSMMUG00000005511	SON	72	51.482	Macaca_mulatta
ENSELUG00000003878	-	78	59.928	ENSMNEG00000031671	SON	73	51.233	Macaca_nemestrina
ENSELUG00000003878	-	78	59.928	ENSMLEG00000035039	SON	73	51.233	Mandrillus_leucophaeus
ENSELUG00000003878	-	68	69.708	ENSMAMG00000003082	-	59	67.019	Mastacembelus_armatus
ENSELUG00000003878	-	68	67.972	ENSMZEG00005018999	-	58	67.311	Maylandia_zebra
ENSELUG00000003878	-	70	63.158	ENSMGAG00000014526	-	84	51.478	Meleagris_gallopavo
ENSELUG00000003878	-	78	59.928	ENSMAUG00000002086	-	72	51.482	Mesocricetus_auratus
ENSELUG00000003878	-	78	59.928	ENSMICG00000033920	SON	72	51.482	Microcebus_murinus
ENSELUG00000003878	-	78	59.928	ENSMOCG00000012860	-	72	51.482	Microtus_ochrogaster
ENSELUG00000003878	-	68	70.111	ENSMALG00000006263	-	99	63.930	Monopterus_albus
ENSELUG00000003878	-	78	59.928	MGP_CAROLIEiJ_G0020965	Son	72	51.482	Mus_caroli
ENSELUG00000003878	-	78	59.928	ENSMUSG00000022961	Son	72	51.482	Mus_musculus
ENSELUG00000003878	-	78	59.928	MGP_PahariEiJ_G0016670	Son	72	51.482	Mus_pahari
ENSELUG00000003878	-	78	59.928	MGP_SPRETEiJ_G0021871	Son	72	51.482	Mus_spretus
ENSELUG00000003878	-	78	59.928	ENSNGAG00000000062	-	72	51.482	Nannospalax_galili
ENSELUG00000003878	-	78	59.928	ENSNLEG00000004002	SON	73	51.233	Nomascus_leucogenys
ENSELUG00000003878	-	78	59.928	ENSODEG00000003658	-	72	51.482	Octodon_degus
ENSELUG00000003878	-	81	62.108	ENSONIG00000003775	-	74	67.237	Oreochromis_niloticus
ENSELUG00000003878	-	91	66.431	ENSORLG00000027334	-	62	61.589	Oryzias_latipes
ENSELUG00000003878	-	80	55.072	ENSORLG00020014016	-	71	57.817	Oryzias_latipes_hni
ENSELUG00000003878	-	83	59.773	ENSORLG00015016415	-	67	59.773	Oryzias_latipes_hsok
ENSELUG00000003878	-	78	59.928	ENSPPAG00000033712	SON	72	51.482	Pan_paniscus
ENSELUG00000003878	-	78	59.928	ENSPPRG00000019353	SON	72	51.482	Panthera_pardus
ENSELUG00000003878	-	78	59.928	ENSPTIG00000017100	SON	72	51.482	Panthera_tigris_altaica
ENSELUG00000003878	-	78	59.928	ENSPTRG00000052356	-	92	67.273	Pan_troglodytes
ENSELUG00000003878	-	78	59.928	ENSPTRG00000013872	SON	72	51.482	Pan_troglodytes
ENSELUG00000003878	-	78	59.928	ENSPANG00000024077	SON	73	51.233	Papio_anubis
ENSELUG00000003878	-	75	65.134	ENSPSIG00000008097	-	76	54.815	Pelodiscus_sinensis
ENSELUG00000003878	-	90	59.621	ENSPMGG00000015598	-	62	73.106	Periophthalmus_magnuspinnatus
ENSELUG00000003878	-	78	60.145	ENSPCIG00000012884	-	73	51.467	Phascolarctos_cinereus
ENSELUG00000003878	-	91	67.596	ENSPLAG00000008338	-	57	65.789	Poecilia_latipinna
ENSELUG00000003878	-	91	66.899	ENSPMEG00000017611	-	67	65.559	Poecilia_mexicana
ENSELUG00000003878	-	86	66.551	ENSPREG00000017979	-	67	66.025	Poecilia_reticulata
ENSELUG00000003878	-	78	59.928	ENSPCOG00000015502	SON	72	51.482	Propithecus_coquereli
ENSELUG00000003878	-	78	59.928	ENSRBIG00000044269	-	92	67.273	Rhinopithecus_bieti
ENSELUG00000003878	-	78	59.928	ENSRROG00000042156	SON	73	51.233	Rhinopithecus_roxellana
ENSELUG00000003878	-	78	59.928	ENSSBOG00000020885	SON	72	51.482	Saimiri_boliviensis_boliviensis
ENSELUG00000003878	-	77	52.941	ENSSHAG00000008266	SON	61	48.232	Sarcophilus_harrisii
ENSELUG00000003878	-	68	70.803	ENSSMAG00000000065	-	61	69.542	Scophthalmus_maximus
ENSELUG00000003878	-	68	69.643	ENSSDUG00000018550	-	59	69.366	Seriola_dumerili
ENSELUG00000003878	-	68	68.571	ENSSPAG00000014575	-	56	68.838	Stegastes_partitus
ENSELUG00000003878	-	70	65.587	ENSTGUG00000000486	-	76	53.904	Taeniopygia_guttata
ENSELUG00000003878	-	70	67.018	ENSTRUG00000019967	-	57	66.784	Takifugu_rubripes
ENSELUG00000003878	-	70	76.423	ENSTNIG00000014468	-	76	68.158	Tetraodon_nigroviridis
ENSELUG00000003878	-	70	66.122	ENSXETG00000014115	son	99	67.742	Xenopus_tropicalis
ENSELUG00000003878	-	81	76.316	ENSXMAG00000025239	-	58	65.734	Xiphophorus_maculatus