EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSELUG00000003954 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 9139 bases
Position: chrLG07:5557538-5566676
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000027630	zf-CCHC	PF00098.23	5.2e-10	1	3
ENSELUP00000027630	zf-CCHC	PF00098.23	5.2e-10	2	3
ENSELUP00000027630	zf-CCHC	PF00098.23	5.2e-10	3	3
ENSELUP00000027623	zf-CCHC	PF00098.23	1.2e-09	1	2
ENSELUP00000027623	zf-CCHC	PF00098.23	1.2e-09	2	2
ENSELUP00000002600	zf-CCHC	PF00098.23	1.7e-09	1	2
ENSELUP00000002600	zf-CCHC	PF00098.23	1.7e-09	2	2
ENSELUP00000027651	zf-CCHC	PF00098.23	1.4e-08	1	2
ENSELUP00000027651	zf-CCHC	PF00098.23	1.4e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000015443	-	414	-	ENSELUP00000027630	137 (aa)	-	-
ENSELUT00000015433	-	465	-	ENSELUP00000002600	154 (aa)	-	-
ENSELUT00000015410	-	393	-	ENSELUP00000027651	130 (aa)	-	-
ENSELUT00000015452	-	435	-	ENSELUP00000027623	144 (aa)	-	-

Gene Model

Click here to download ENSELUG00000003954's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000003954's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000003954	-	87	31.507	ENSELUG00000013402	cnbpb	86	31.507