EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000004150 (Gene tree)
Gene ID: 105015236
Gene Symbol: ddx56
Alias: noh61|zgc:110078
Full Name: DEAD-box helicase 56
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 8113 bases
Position: chrLG14:21818479-21826591
Accession: 105015236
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000002831	ResIII	PF04851.15	2.7e-06	1	1
ENSELUP00000002841	ResIII	PF04851.15	5.6e-05	1	1
ENSELUP00000002831	DEAD	PF00270.29	2.7e-39	1	1
ENSELUP00000002841	DEAD	PF00270.29	1.4e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000015051	-	3296	XM_010878233	ENSELUP00000002831	557 (aa)	XP_010876535	UPI000577B4D8
ENSELUT00000015038	-	1575	-	ENSELUP00000002841	524 (aa)	-	-

Gene Model

Click here to download ENSELUG00000004150's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000004150's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000004150	ddx56	68	30.133	ENSELUG00000023518	-	52	30.133
ENSELUG00000004150	ddx56	69	30.194	ENSELUG00000020545	ddx61	69	30.194
ENSELUG00000004150	ddx56	75	30.896	ENSELUG00000018002	ddx52	67	30.969
ENSELUG00000004150	ddx56	69	30.471	ENSELUG00000022660	ddx6	68	30.471
ENSELUG00000004150	ddx56	69	30.601	ENSELUG00000009107	ddx5	55	30.601
ENSELUG00000004150	ddx56	71	31.646	ENSELUG00000009495	ddx47	67	31.646
ENSELUG00000004150	ddx56	68	30.789	ENSELUG00000002616	ddx55	59	30.789
ENSELUG00000004150	ddx56	69	30.601	ENSELUG00000007424	DDX5	58	30.601
ENSELUG00000004150	ddx56	74	30.000	ENSELUG00000008640	ddx18	56	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000004150	ddx56	97	65.876	ENSG00000136271	DDX56	99	68.267	Homo_sapiens
ENSELUG00000004150	ddx56	100	83.779	ENSAPOG00000017113	ddx56	100	83.779	Acanthochromis_polyacanthus
ENSELUG00000004150	ddx56	97	65.683	ENSAMEG00000017711	DDX56	97	65.683	Ailuropoda_melanoleuca
ENSELUG00000004150	ddx56	95	71.161	ENSACIG00000013747	ddx56	99	80.328	Amphilophus_citrinellus
ENSELUG00000004150	ddx56	87	87.680	ENSAOCG00000015447	-	91	84.646	Amphiprion_ocellaris
ENSELUG00000004150	ddx56	89	87.400	ENSAOCG00000018059	ddx56	94	86.800	Amphiprion_ocellaris
ENSELUG00000004150	ddx56	100	83.513	ENSAPEG00000007267	ddx56	100	83.513	Amphiprion_percula
ENSELUG00000004150	ddx56	99	83.750	ENSATEG00000005279	ddx56	100	83.750	Anabas_testudineus
ENSELUG00000004150	ddx56	100	79.643	ENSACLG00000020113	ddx56	100	79.821	Astatotilapia_calliptera
ENSELUG00000004150	ddx56	99	76.481	ENSAMXG00000019357	ddx56	99	76.661	Astyanax_mexicanus
ENSELUG00000004150	ddx56	97	66.728	ENSBTAG00000010602	DDX56	97	66.360	Bos_taurus
ENSELUG00000004150	ddx56	96	40.468	WBGene00016073	C24H12.4	86	40.217	Caenorhabditis_elegans
ENSELUG00000004150	ddx56	97	65.876	ENSCJAG00000012233	DDX56	97	65.688	Callithrix_jacchus
ENSELUG00000004150	ddx56	80	63.616	ENSCAFG00000029295	DDX56	97	64.286	Canis_familiaris
ENSELUG00000004150	ddx56	92	65.868	ENSCAFG00020019695	DDX56	98	64.340	Canis_lupus_dingo
ENSELUG00000004150	ddx56	97	66.728	ENSCHIG00000014261	DDX56	97	66.360	Capra_hircus
ENSELUG00000004150	ddx56	90	68.959	ENSTSYG00000008048	DDX56	97	66.236	Carlito_syrichta
ENSELUG00000004150	ddx56	86	65.489	ENSCAPG00000006286	DDX56	98	65.073	Cavia_aperea
ENSELUG00000004150	ddx56	99	66.068	ENSCPOG00000003359	DDX56	98	65.704	Cavia_porcellus
ENSELUG00000004150	ddx56	97	65.328	ENSCCAG00000025303	DDX56	97	64.954	Cebus_capucinus
ENSELUG00000004150	ddx56	97	65.328	ENSCATG00000039389	DDX56	97	65.138	Cercocebus_atys
ENSELUG00000004150	ddx56	99	64.621	ENSCLAG00000007666	DDX56	99	64.440	Chinchilla_lanigera
ENSELUG00000004150	ddx56	97	65.273	ENSCSAG00000015636	DDX56	97	65.082	Chlorocebus_sabaeus
ENSELUG00000004150	ddx56	96	71.719	ENSCPBG00000024556	DDX56	96	71.852	Chrysemys_picta_bellii
ENSELUG00000004150	ddx56	90	62.205	ENSCING00000005185	-	98	62.205	Ciona_intestinalis
ENSELUG00000004150	ddx56	89	59.800	ENSCSAVG00000011266	-	99	59.127	Ciona_savignyi
ENSELUG00000004150	ddx56	97	65.631	ENSCANG00000028187	DDX56	97	65.082	Colobus_angolensis_palliatus
ENSELUG00000004150	ddx56	97	66.974	ENSCGRG00001019019	Ddx56	97	66.421	Cricetulus_griseus_chok1gshd
ENSELUG00000004150	ddx56	97	66.974	ENSCGRG00000011870	Ddx56	97	66.421	Cricetulus_griseus_crigri
ENSELUG00000004150	ddx56	100	80.749	ENSCSEG00000008368	ddx56	100	80.927	Cynoglossus_semilaevis
ENSELUG00000004150	ddx56	100	79.928	ENSCVAG00000006499	ddx56	100	80.108	Cyprinodon_variegatus
ENSELUG00000004150	ddx56	99	79.892	ENSDARG00000020913	ddx56	99	80.072	Danio_rerio
ENSELUG00000004150	ddx56	85	65.199	ENSDNOG00000036526	DDX56	97	64.583	Dasypus_novemcinctus
ENSELUG00000004150	ddx56	99	49.640	FBgn0001565	Hlc	98	49.460	Drosophila_melanogaster
ENSELUG00000004150	ddx56	87	45.551	ENSETEG00000019559	-	99	46.555	Echinops_telfairi
ENSELUG00000004150	ddx56	63	69.444	ENSETEG00000002969	-	64	69.444	Echinops_telfairi
ENSELUG00000004150	ddx56	97	65.455	ENSEBUG00000009986	ddx56	99	65.455	Eptatretus_burgeri
ENSELUG00000004150	ddx56	95	63.216	ENSEASG00005017795	DDX56	97	65.314	Equus_asinus_asinus
ENSELUG00000004150	ddx56	95	63.031	ENSECAG00000019897	DDX56	97	65.129	Equus_caballus
ENSELUG00000004150	ddx56	79	69.248	ENSEEUG00000004849	DDX56	92	68.565	Erinaceus_europaeus
ENSELUG00000004150	ddx56	97	64.954	ENSFCAG00000010261	DDX56	97	65.314	Felis_catus
ENSELUG00000004150	ddx56	97	65.257	ENSFDAG00000007128	DDX56	97	64.890	Fukomys_damarensis
ENSELUG00000004150	ddx56	100	78.456	ENSFHEG00000018008	ddx56	96	84.507	Fundulus_heteroclitus
ENSELUG00000004150	ddx56	100	73.118	ENSGAFG00000006906	ddx56	99	73.118	Gambusia_affinis
ENSELUG00000004150	ddx56	92	73.308	ENSGAGG00000006789	DDX56	91	72.031	Gopherus_agassizii
ENSELUG00000004150	ddx56	97	65.876	ENSGGOG00000012031	DDX56	97	65.688	Gorilla_gorilla
ENSELUG00000004150	ddx56	95	75.797	ENSHBUG00000015246	ddx56	96	75.985	Haplochromis_burtoni
ENSELUG00000004150	ddx56	97	65.082	ENSHGLG00000017271	DDX56	97	64.706	Heterocephalus_glaber_female
ENSELUG00000004150	ddx56	97	65.082	ENSHGLG00100015731	DDX56	97	64.706	Heterocephalus_glaber_male
ENSELUG00000004150	ddx56	98	80.292	ENSHCOG00000001685	ddx56	98	80.439	Hippocampus_comes
ENSELUG00000004150	ddx56	97	79.121	ENSIPUG00000006602	ddx56	96	79.121	Ictalurus_punctatus
ENSELUG00000004150	ddx56	98	65.636	ENSSTOG00000000464	DDX56	98	65.091	Ictidomys_tridecemlineatus
ENSELUG00000004150	ddx56	97	66.790	ENSJJAG00000014269	Ddx56	97	66.421	Jaculus_jaculus
ENSELUG00000004150	ddx56	99	79.249	ENSKMAG00000016611	ddx56	99	79.249	Kryptolebias_marmoratus
ENSELUG00000004150	ddx56	99	81.655	ENSLBEG00000026281	ddx56	99	81.655	Labrus_bergylta
ENSELUG00000004150	ddx56	99	72.464	ENSLACG00000015551	DDX56	97	72.694	Latimeria_chalumnae
ENSELUG00000004150	ddx56	100	76.708	ENSLOCG00000015185	ddx56	99	77.936	Lepisosteus_oculatus
ENSELUG00000004150	ddx56	98	66.362	ENSLAFG00000018206	DDX56	98	65.455	Loxodonta_africana
ENSELUG00000004150	ddx56	97	65.511	ENSMFAG00000041001	DDX56	97	65.321	Macaca_fascicularis
ENSELUG00000004150	ddx56	97	65.511	ENSMMUG00000002645	DDX56	97	65.321	Macaca_mulatta
ENSELUG00000004150	ddx56	97	65.511	ENSMNEG00000028492	DDX56	97	65.321	Macaca_nemestrina
ENSELUG00000004150	ddx56	97	65.511	ENSMLEG00000043591	DDX56	97	65.321	Mandrillus_leucophaeus
ENSELUG00000004150	ddx56	100	83.214	ENSMAMG00000007776	ddx56	100	83.393	Mastacembelus_armatus
ENSELUG00000004150	ddx56	100	79.643	ENSMZEG00005009813	ddx56	100	79.821	Maylandia_zebra
ENSELUG00000004150	ddx56	97	67.159	ENSMICG00000005550	DDX56	97	66.421	Microcebus_murinus
ENSELUG00000004150	ddx56	97	66.052	ENSMOCG00000016782	Ddx56	97	65.138	Microtus_ochrogaster
ENSELUG00000004150	ddx56	100	79.359	ENSMMOG00000009654	ddx56	99	83.271	Mola_mola
ENSELUG00000004150	ddx56	98	62.113	ENSMODG00000016137	DDX56	98	60.901	Monodelphis_domestica
ENSELUG00000004150	ddx56	69	78.962	ENSMALG00000016910	ddx56	99	78.962	Monopterus_albus
ENSELUG00000004150	ddx56	97	65.867	MGP_CAROLIEiJ_G0016069	Ddx56	97	67.073	Mus_caroli
ENSELUG00000004150	ddx56	97	65.867	ENSMUSG00000004393	Ddx56	97	67.480	Mus_musculus
ENSELUG00000004150	ddx56	97	66.052	MGP_PahariEiJ_G0016822	Ddx56	97	67.073	Mus_pahari
ENSELUG00000004150	ddx56	97	65.867	MGP_SPRETEiJ_G0016911	Ddx56	97	67.480	Mus_spretus
ENSELUG00000004150	ddx56	97	65.683	ENSMPUG00000018196	DDX56	85	65.314	Mustela_putorius_furo
ENSELUG00000004150	ddx56	94	65.511	ENSMLUG00000003509	DDX56	98	65.693	Myotis_lucifugus
ENSELUG00000004150	ddx56	97	66.790	ENSNGAG00000018785	Ddx56	97	65.688	Nannospalax_galili
ENSELUG00000004150	ddx56	97	76.427	ENSNBRG00000002656	ddx56	98	76.059	Neolamprologus_brichardi
ENSELUG00000004150	ddx56	97	65.511	ENSNLEG00000003816	DDX56	97	65.321	Nomascus_leucogenys
ENSELUG00000004150	ddx56	89	62.651	ENSMEUG00000006788	DDX56	99	61.677	Notamacropus_eugenii
ENSELUG00000004150	ddx56	97	65.074	ENSOPRG00000000292	-	97	63.419	Ochotona_princeps
ENSELUG00000004150	ddx56	68	69.169	ENSODEG00000014807	DDX56	99	69.169	Octodon_degus
ENSELUG00000004150	ddx56	100	78.097	ENSONIG00000011509	ddx56	99	78.097	Oreochromis_niloticus
ENSELUG00000004150	ddx56	91	62.245	ENSOANG00000006320	-	94	62.449	Ornithorhynchus_anatinus
ENSELUG00000004150	ddx56	72	57.843	ENSOANG00000015987	-	93	57.843	Ornithorhynchus_anatinus
ENSELUG00000004150	ddx56	98	64.545	ENSOCUG00000022918	DDX56	98	64.545	Oryctolagus_cuniculus
ENSELUG00000004150	ddx56	100	80.570	ENSORLG00000001434	ddx56	100	80.287	Oryzias_latipes
ENSELUG00000004150	ddx56	100	80.392	ENSORLG00020015718	ddx56	97	80.108	Oryzias_latipes_hni
ENSELUG00000004150	ddx56	99	80.536	ENSORLG00015003004	ddx56	96	80.251	Oryzias_latipes_hsok
ENSELUG00000004150	ddx56	100	80.824	ENSOMEG00000022072	ddx56	99	81.183	Oryzias_melastigma
ENSELUG00000004150	ddx56	97	65.867	ENSOGAG00000009981	DDX56	97	65.867	Otolemur_garnettii
ENSELUG00000004150	ddx56	97	66.912	ENSOARG00000015240	DDX56	97	67.621	Ovis_aries
ENSELUG00000004150	ddx56	97	63.016	ENSPPAG00000029147	DDX56	97	62.816	Pan_paniscus
ENSELUG00000004150	ddx56	92	56.202	ENSPPAG00000031263	-	93	55.556	Pan_paniscus
ENSELUG00000004150	ddx56	97	65.505	ENSPPRG00000014594	DDX56	97	65.498	Panthera_pardus
ENSELUG00000004150	ddx56	86	62.680	ENSPTIG00000019500	DDX56	91	62.863	Panthera_tigris_altaica
ENSELUG00000004150	ddx56	92	53.950	ENSPTRG00000052765	-	98	54.913	Pan_troglodytes
ENSELUG00000004150	ddx56	97	65.876	ENSPTRG00000019147	DDX56	97	65.688	Pan_troglodytes
ENSELUG00000004150	ddx56	97	65.146	ENSPANG00000002446	DDX56	97	64.954	Papio_anubis
ENSELUG00000004150	ddx56	99	80.645	ENSPKIG00000018998	ddx56	99	80.360	Paramormyrops_kingsleyae
ENSELUG00000004150	ddx56	95	83.774	ENSPMGG00000017421	ddx56	99	83.774	Periophthalmus_magnuspinnatus
ENSELUG00000004150	ddx56	99	67.864	ENSPCIG00000009336	DDX56	98	66.964	Phascolarctos_cinereus
ENSELUG00000004150	ddx56	100	81.362	ENSPFOG00000018658	ddx56	100	81.362	Poecilia_formosa
ENSELUG00000004150	ddx56	100	81.541	ENSPLAG00000019208	ddx56	100	81.541	Poecilia_latipinna
ENSELUG00000004150	ddx56	100	81.183	ENSPMEG00000001775	ddx56	100	81.183	Poecilia_mexicana
ENSELUG00000004150	ddx56	100	81.183	ENSPREG00000015142	ddx56	100	81.362	Poecilia_reticulata
ENSELUG00000004150	ddx56	97	65.876	ENSPPYG00000017591	DDX56	97	65.688	Pongo_abelii
ENSELUG00000004150	ddx56	94	66.604	ENSPCAG00000011499	DDX56	98	65.666	Procavia_capensis
ENSELUG00000004150	ddx56	97	66.605	ENSPCOG00000024864	DDX56	97	66.052	Propithecus_coquereli
ENSELUG00000004150	ddx56	87	69.378	ENSPVAG00000000791	DDX56	86	69.378	Pteropus_vampyrus
ENSELUG00000004150	ddx56	100	79.464	ENSPNYG00000019212	ddx56	100	79.643	Pundamilia_nyererei
ENSELUG00000004150	ddx56	99	81.261	ENSPNAG00000025446	ddx56	99	80.721	Pygocentrus_nattereri
ENSELUG00000004150	ddx56	97	65.498	ENSRNOG00000004670	Ddx56	97	64.945	Rattus_norvegicus
ENSELUG00000004150	ddx56	97	65.273	ENSRBIG00000030140	DDX56	97	65.082	Rhinopithecus_bieti
ENSELUG00000004150	ddx56	97	65.091	ENSRROG00000044428	DDX56	97	64.899	Rhinopithecus_roxellana
ENSELUG00000004150	ddx56	97	43.271	YLR276C	-	98	44.369	Saccharomyces_cerevisiae
ENSELUG00000004150	ddx56	97	65.511	ENSSBOG00000034339	DDX56	97	65.321	Saimiri_boliviensis_boliviensis
ENSELUG00000004150	ddx56	85	68.344	ENSSHAG00000016615	DDX56	97	67.292	Sarcophilus_harrisii
ENSELUG00000004150	ddx56	100	78.660	ENSSFOG00015012795	ddx56	100	79.286	Scleropages_formosus
ENSELUG00000004150	ddx56	100	81.350	ENSSMAG00000011280	ddx56	99	84.888	Scophthalmus_maximus
ENSELUG00000004150	ddx56	100	83.630	ENSSDUG00000023597	ddx56	100	84.342	Seriola_dumerili
ENSELUG00000004150	ddx56	100	83.630	ENSSLDG00000018369	ddx56	100	84.342	Seriola_lalandi_dorsalis
ENSELUG00000004150	ddx56	69	80.357	ENSSARG00000014363	DDX56	75	79.032	Sorex_araneus
ENSELUG00000004150	ddx56	98	72.678	ENSSPUG00000000784	DDX56	95	72.131	Sphenodon_punctatus
ENSELUG00000004150	ddx56	95	85.206	ENSSPAG00000009392	ddx56	99	85.393	Stegastes_partitus
ENSELUG00000004150	ddx56	97	66.236	ENSSSCG00000016745	DDX56	97	65.867	Sus_scrofa
ENSELUG00000004150	ddx56	100	80.142	ENSTRUG00000018623	ddx56	100	80.319	Takifugu_rubripes
ENSELUG00000004150	ddx56	99	80.000	ENSTNIG00000013593	ddx56	100	80.000	Tetraodon_nigroviridis
ENSELUG00000004150	ddx56	98	65.880	ENSTBEG00000007119	DDX56	98	65.336	Tupaia_belangeri
ENSELUG00000004150	ddx56	78	69.977	ENSTTRG00000010552	DDX56	96	66.525	Tursiops_truncatus
ENSELUG00000004150	ddx56	97	65.683	ENSUAMG00000014194	DDX56	97	65.683	Ursus_americanus
ENSELUG00000004150	ddx56	97	65.683	ENSUMAG00000009666	DDX56	97	65.683	Ursus_maritimus
ENSELUG00000004150	ddx56	95	62.011	ENSVVUG00000011905	DDX56	96	65.000	Vulpes_vulpes
ENSELUG00000004150	ddx56	98	73.443	ENSXETG00000019000	ddx56	99	73.675	Xenopus_tropicalis
ENSELUG00000004150	ddx56	100	77.020	ENSXCOG00000017413	ddx56	99	76.208	Xiphophorus_couchianus
ENSELUG00000004150	ddx56	100	80.610	ENSXMAG00000018749	ddx56	100	80.610	Xiphophorus_maculatus