EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000004211 (Gene tree)
Gene ID: 105012249
Gene Symbol: pdcd11
Alias: cb680|im:7148359|sb:cb680|wu:fc68c10
Full Name: programmed cell death 11
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 16057 bases
Position: chrLG09:10234428-10250484
Accession: 105012249
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000002901	Suf	PF05843.14	2.1e-09	1	1
ENSELUP00000002901	S1	PF00575.23	7.5e-62	1	4
ENSELUP00000002901	S1	PF00575.23	7.5e-62	2	4
ENSELUP00000002901	S1	PF00575.23	7.5e-62	3	4
ENSELUP00000002901	S1	PF00575.23	7.5e-62	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000014914	-	5466	XM_013135305	ENSELUP00000002901	1821 (aa)	XP_012990759	-

Gene Model

Click here to download ENSELUG00000004211's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000004211's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000004211	pdcd11	99	61.333	ENSAPOG00000015629	pdcd11	100	61.278	Acanthochromis_polyacanthus
ENSELUG00000004211	pdcd11	99	45.016	ENSAMEG00000017935	PDCD11	94	62.464	Ailuropoda_melanoleuca
ENSELUG00000004211	pdcd11	50	53.514	ENSACIG00000006458	-	98	53.514	Amphilophus_citrinellus
ENSELUG00000004211	pdcd11	99	60.710	ENSAOCG00000015287	pdcd11	100	60.601	Amphiprion_ocellaris
ENSELUG00000004211	pdcd11	56	56.560	ENSAPEG00000020240	pdcd11	100	56.560	Amphiprion_percula
ENSELUG00000004211	pdcd11	99	62.226	ENSATEG00000021043	pdcd11	99	62.390	Anabas_testudineus
ENSELUG00000004211	pdcd11	99	44.119	ENSAPLG00000010301	PDCD11	99	44.296	Anas_platyrhynchos
ENSELUG00000004211	pdcd11	99	45.008	ENSACAG00000004796	PDCD11	99	44.880	Anolis_carolinensis
ENSELUG00000004211	pdcd11	93	81.395	ENSACLG00000018236	pdcd11	99	75.291	Astatotilapia_calliptera
ENSELUG00000004211	pdcd11	99	49.642	ENSAMXG00000005458	pdcd11	97	54.408	Astyanax_mexicanus
ENSELUG00000004211	pdcd11	99	44.992	ENSBTAG00000009715	PDCD11	99	45.016	Bos_taurus
ENSELUG00000004211	pdcd11	99	45.532	ENSCAFG00000010411	PDCD11	99	45.769	Canis_familiaris
ENSELUG00000004211	pdcd11	99	46.096	ENSCAFG00020010369	PDCD11	99	46.141	Canis_lupus_dingo
ENSELUG00000004211	pdcd11	99	45.228	ENSCHIG00000025218	PDCD11	99	45.175	Capra_hircus
ENSELUG00000004211	pdcd11	97	43.375	ENSTSYG00000033423	PDCD11	99	43.430	Carlito_syrichta
ENSELUG00000004211	pdcd11	90	40.586	ENSCAPG00000005386	PDCD11	99	40.039	Cavia_aperea
ENSELUG00000004211	pdcd11	99	44.154	ENSCPOG00000010957	PDCD11	99	43.940	Cavia_porcellus
ENSELUG00000004211	pdcd11	99	44.857	ENSCCAG00000018950	PDCD11	99	44.421	Cebus_capucinus
ENSELUG00000004211	pdcd11	99	45.069	ENSCATG00000044331	PDCD11	99	44.527	Cercocebus_atys
ENSELUG00000004211	pdcd11	99	44.551	ENSCLAG00000001029	PDCD11	99	44.450	Chinchilla_lanigera
ENSELUG00000004211	pdcd11	99	45.064	ENSCSAG00000005346	PDCD11	99	44.521	Chlorocebus_sabaeus
ENSELUG00000004211	pdcd11	67	68.217	ENSCHOG00000004796	PDCD11	74	68.217	Choloepus_hoffmanni
ENSELUG00000004211	pdcd11	94	56.404	ENSCPBG00000024487	PDCD11	99	63.372	Chrysemys_picta_bellii
ENSELUG00000004211	pdcd11	99	45.170	ENSCANG00000043300	PDCD11	99	44.628	Colobus_angolensis_palliatus
ENSELUG00000004211	pdcd11	99	44.615	ENSCGRG00001006458	Pdcd11	99	44.910	Cricetulus_griseus_chok1gshd
ENSELUG00000004211	pdcd11	99	44.486	ENSCGRG00000003583	Pdcd11	99	44.780	Cricetulus_griseus_crigri
ENSELUG00000004211	pdcd11	96	58.046	ENSCSEG00000010739	pdcd11	99	58.103	Cynoglossus_semilaevis
ENSELUG00000004211	pdcd11	99	57.163	ENSCVAG00000018903	pdcd11	100	57.163	Cyprinodon_variegatus
ENSELUG00000004211	pdcd11	99	52.877	ENSDARG00000052480	pdcd11	100	53.040	Danio_rerio
ENSELUG00000004211	pdcd11	99	43.783	ENSDORG00000010420	Pdcd11	99	44.043	Dipodomys_ordii
ENSELUG00000004211	pdcd11	64	34.069	FBgn0039182	CG5728	81	34.069	Drosophila_melanogaster
ENSELUG00000004211	pdcd11	89	41.667	ENSETEG00000000813	PDCD11	96	40.691	Echinops_telfairi
ENSELUG00000004211	pdcd11	71	48.701	ENSEBUG00000002358	-	89	48.701	Eptatretus_burgeri
ENSELUG00000004211	pdcd11	94	46.433	ENSEASG00005015159	PDCD11	99	46.377	Equus_asinus_asinus
ENSELUG00000004211	pdcd11	99	46.231	ENSECAG00000020507	PDCD11	99	45.488	Equus_caballus
ENSELUG00000004211	pdcd11	97	46.081	ENSEEUG00000009245	PDCD11	90	45.891	Erinaceus_europaeus
ENSELUG00000004211	pdcd11	99	45.262	ENSFCAG00000002384	PDCD11	99	45.541	Felis_catus
ENSELUG00000004211	pdcd11	99	45.356	ENSFALG00000008775	PDCD11	99	45.410	Ficedula_albicollis
ENSELUG00000004211	pdcd11	99	44.551	ENSFDAG00000009532	PDCD11	99	44.368	Fukomys_damarensis
ENSELUG00000004211	pdcd11	89	79.934	ENSFHEG00000022997	pdcd11	95	79.934	Fundulus_heteroclitus
ENSELUG00000004211	pdcd11	93	57.305	ENSGMOG00000004186	pdcd11	94	57.053	Gadus_morhua
ENSELUG00000004211	pdcd11	76	42.414	ENSGALG00000008265	PDCD11	98	42.222	Gallus_gallus
ENSELUG00000004211	pdcd11	96	64.060	ENSGAFG00000012806	pdcd11	100	63.128	Gambusia_affinis
ENSELUG00000004211	pdcd11	99	58.649	ENSGACG00000018233	pdcd11	97	74.869	Gasterosteus_aculeatus
ENSELUG00000004211	pdcd11	94	46.686	ENSGAGG00000024314	PDCD11	100	47.282	Gopherus_agassizii
ENSELUG00000004211	pdcd11	99	60.428	ENSHBUG00000020226	pdcd11	99	60.493	Haplochromis_burtoni
ENSELUG00000004211	pdcd11	99	44.616	ENSHGLG00000001462	PDCD11	99	44.510	Heterocephalus_glaber_female
ENSELUG00000004211	pdcd11	99	44.083	ENSHGLG00100018779	PDCD11	99	44.030	Heterocephalus_glaber_male
ENSELUG00000004211	pdcd11	99	57.080	ENSHCOG00000016006	pdcd11	100	56.970	Hippocampus_comes
ENSELUG00000004211	pdcd11	62	53.584	ENSIPUG00000015102	pdcd11	99	54.292	Ictalurus_punctatus
ENSELUG00000004211	pdcd11	99	44.826	ENSSTOG00000014553	PDCD11	99	45.230	Ictidomys_tridecemlineatus
ENSELUG00000004211	pdcd11	99	45.318	ENSJJAG00000015523	Pdcd11	99	45.425	Jaculus_jaculus
ENSELUG00000004211	pdcd11	50	54.919	ENSKMAG00000021182	pdcd11	99	54.919	Kryptolebias_marmoratus
ENSELUG00000004211	pdcd11	99	55.726	ENSLOCG00000011818	pdcd11	100	55.890	Lepisosteus_oculatus
ENSELUG00000004211	pdcd11	99	45.405	ENSLAFG00000008398	PDCD11	99	45.076	Loxodonta_africana
ENSELUG00000004211	pdcd11	99	45.064	ENSMFAG00000044058	PDCD11	99	44.574	Macaca_fascicularis
ENSELUG00000004211	pdcd11	99	45.064	ENSMMUG00000007058	PDCD11	99	44.574	Macaca_mulatta
ENSELUG00000004211	pdcd11	99	45.040	ENSMNEG00000040726	PDCD11	99	44.551	Macaca_nemestrina
ENSELUG00000004211	pdcd11	99	45.396	ENSMLEG00000040978	PDCD11	99	45.307	Mandrillus_leucophaeus
ENSELUG00000004211	pdcd11	99	60.000	ENSMAMG00000009572	pdcd11	100	60.285	Mastacembelus_armatus
ENSELUG00000004211	pdcd11	99	60.318	ENSMZEG00005008949	pdcd11	99	60.384	Maylandia_zebra
ENSELUG00000004211	pdcd11	99	43.913	ENSMGAG00000010482	PDCD11	99	44.444	Meleagris_gallopavo
ENSELUG00000004211	pdcd11	99	45.655	ENSMAUG00000014924	Pdcd11	99	46.405	Mesocricetus_auratus
ENSELUG00000004211	pdcd11	99	45.736	ENSMICG00000012421	PDCD11	99	45.736	Microcebus_murinus
ENSELUG00000004211	pdcd11	99	44.468	ENSMOCG00000021792	Pdcd11	99	44.403	Microtus_ochrogaster
ENSELUG00000004211	pdcd11	99	52.557	ENSMMOG00000007572	pdcd11	96	57.802	Mola_mola
ENSELUG00000004211	pdcd11	93	49.313	ENSMODG00000011077	PDCD11	100	42.744	Monodelphis_domestica
ENSELUG00000004211	pdcd11	99	50.710	ENSMALG00000003859	pdcd11	98	56.182	Monopterus_albus
ENSELUG00000004211	pdcd11	99	44.231	MGP_CAROLIEiJ_G0023050	Pdcd11	99	44.409	Mus_caroli
ENSELUG00000004211	pdcd11	99	43.820	ENSMUSG00000025047	Pdcd11	99	44.008	Mus_musculus
ENSELUG00000004211	pdcd11	99	43.830	MGP_PahariEiJ_G0014540	Pdcd11	99	44.203	Mus_pahari
ENSELUG00000004211	pdcd11	99	44.036	MGP_SPRETEiJ_G0023971	Pdcd11	99	44.385	Mus_spretus
ENSELUG00000004211	pdcd11	99	45.261	ENSMPUG00000016829	PDCD11	99	45.401	Mustela_putorius_furo
ENSELUG00000004211	pdcd11	99	45.560	ENSMLUG00000004997	PDCD11	99	45.503	Myotis_lucifugus
ENSELUG00000004211	pdcd11	99	44.333	ENSNGAG00000018143	Pdcd11	99	44.721	Nannospalax_galili
ENSELUG00000004211	pdcd11	84	73.567	ENSNBRG00000021596	pdcd11	95	70.219	Neolamprologus_brichardi
ENSELUG00000004211	pdcd11	99	44.030	ENSNLEG00000026700	PDCD11	99	43.590	Nomascus_leucogenys
ENSELUG00000004211	pdcd11	70	68.000	ENSMEUG00000013719	-	61	68.000	Notamacropus_eugenii
ENSELUG00000004211	pdcd11	99	44.350	ENSOPRG00000010593	PDCD11	99	44.320	Ochotona_princeps
ENSELUG00000004211	pdcd11	99	44.403	ENSODEG00000008079	PDCD11	99	44.515	Octodon_degus
ENSELUG00000004211	pdcd11	99	60.154	ENSONIG00000018835	pdcd11	99	60.318	Oreochromis_niloticus
ENSELUG00000004211	pdcd11	99	43.875	ENSOANG00000001636	-	99	43.706	Ornithorhynchus_anatinus
ENSELUG00000004211	pdcd11	99	45.661	ENSOCUG00000006312	PDCD11	99	45.767	Oryctolagus_cuniculus
ENSELUG00000004211	pdcd11	99	59.111	ENSORLG00020003642	pdcd11	100	59.276	Oryzias_latipes_hni
ENSELUG00000004211	pdcd11	99	59.033	ENSORLG00015001618	pdcd11	100	59.143	Oryzias_latipes_hsok
ENSELUG00000004211	pdcd11	65	60.888	ENSOMEG00000010904	pdcd11	99	61.055	Oryzias_melastigma
ENSELUG00000004211	pdcd11	99	45.416	ENSOGAG00000008683	PDCD11	99	45.623	Otolemur_garnettii
ENSELUG00000004211	pdcd11	99	44.915	ENSOARG00000003719	PDCD11	99	44.915	Ovis_aries
ENSELUG00000004211	pdcd11	99	44.079	ENSPPAG00000024593	PDCD11	94	62.178	Pan_paniscus
ENSELUG00000004211	pdcd11	99	45.392	ENSPPRG00000015133	PDCD11	99	45.619	Panthera_pardus
ENSELUG00000004211	pdcd11	99	45.180	ENSPTIG00000011433	PDCD11	99	45.406	Panthera_tigris_altaica
ENSELUG00000004211	pdcd11	99	45.170	ENSPANG00000020959	PDCD11	99	44.923	Papio_anubis
ENSELUG00000004211	pdcd11	99	55.072	ENSPKIG00000000973	pdcd11	99	55.501	Paramormyrops_kingsleyae
ENSELUG00000004211	pdcd11	77	44.073	ENSPSIG00000005102	PDCD11	94	44.142	Pelodiscus_sinensis
ENSELUG00000004211	pdcd11	73	79.811	ENSPMGG00000007289	pdcd11	96	77.982	Periophthalmus_magnuspinnatus
ENSELUG00000004211	pdcd11	99	44.256	ENSPEMG00000010315	Pdcd11	99	44.597	Peromyscus_maniculatus_bairdii
ENSELUG00000004211	pdcd11	99	40.466	ENSPMAG00000003098	pdcd11	99	40.637	Petromyzon_marinus
ENSELUG00000004211	pdcd11	99	44.115	ENSPCIG00000001118	PDCD11	99	44.115	Phascolarctos_cinereus
ENSELUG00000004211	pdcd11	99	58.397	ENSPFOG00000006012	pdcd11	100	58.498	Poecilia_formosa
ENSELUG00000004211	pdcd11	99	61.905	ENSPLAG00000014494	pdcd11	100	61.738	Poecilia_latipinna
ENSELUG00000004211	pdcd11	94	59.319	ENSPMEG00000018177	pdcd11	100	58.961	Poecilia_mexicana
ENSELUG00000004211	pdcd11	99	58.073	ENSPREG00000000475	pdcd11	100	58.283	Poecilia_reticulata
ENSELUG00000004211	pdcd11	99	40.334	ENSPPYG00000002621	PDCD11	99	40.056	Pongo_abelii
ENSELUG00000004211	pdcd11	65	60.000	ENSPCAG00000011663	PDCD11	69	60.000	Procavia_capensis
ENSELUG00000004211	pdcd11	90	47.207	ENSPCOG00000023327	PDCD11	97	46.871	Propithecus_coquereli
ENSELUG00000004211	pdcd11	99	45.045	ENSPVAG00000004176	PDCD11	99	44.780	Pteropus_vampyrus
ENSELUG00000004211	pdcd11	99	60.209	ENSPNYG00000003979	pdcd11	99	60.274	Pundamilia_nyererei
ENSELUG00000004211	pdcd11	95	57.258	ENSPNAG00000017225	pdcd11	100	57.372	Pygocentrus_nattereri
ENSELUG00000004211	pdcd11	99	44.135	ENSRNOG00000020304	Pdcd11	99	44.023	Rattus_norvegicus
ENSELUG00000004211	pdcd11	99	45.064	ENSRBIG00000011889	PDCD11	99	44.521	Rhinopithecus_bieti
ENSELUG00000004211	pdcd11	99	45.117	ENSRROG00000030483	PDCD11	99	44.574	Rhinopithecus_roxellana
ENSELUG00000004211	pdcd11	99	43.715	ENSSBOG00000030308	PDCD11	99	43.715	Saimiri_boliviensis_boliviensis
ENSELUG00000004211	pdcd11	99	43.889	ENSSHAG00000018258	PDCD11	100	44.155	Sarcophilus_harrisii
ENSELUG00000004211	pdcd11	99	55.952	ENSSFOG00015003881	pdcd11	100	55.855	Scleropages_formosus
ENSELUG00000004211	pdcd11	99	60.855	ENSSMAG00000006612	pdcd11	100	60.965	Scophthalmus_maximus
ENSELUG00000004211	pdcd11	97	60.699	ENSSDUG00000021302	pdcd11	99	61.493	Seriola_dumerili
ENSELUG00000004211	pdcd11	78	69.388	ENSSARG00000002540	PDCD11	71	69.388	Sorex_araneus
ENSELUG00000004211	pdcd11	96	59.638	ENSSPAG00000017558	pdcd11	100	59.808	Stegastes_partitus
ENSELUG00000004211	pdcd11	99	45.657	ENSSSCG00000010599	PDCD11	99	45.498	Sus_scrofa
ENSELUG00000004211	pdcd11	70	56.323	ENSTRUG00000014291	pdcd11	99	56.633	Takifugu_rubripes
ENSELUG00000004211	pdcd11	99	57.775	ENSTNIG00000012085	pdcd11	99	57.937	Tetraodon_nigroviridis
ENSELUG00000004211	pdcd11	99	43.009	ENSTBEG00000001893	PDCD11	95	60.745	Tupaia_belangeri
ENSELUG00000004211	pdcd11	99	42.585	ENSTTRG00000003356	PDCD11	76	40.692	Tursiops_truncatus
ENSELUG00000004211	pdcd11	99	45.156	ENSUAMG00000018015	PDCD11	99	45.264	Ursus_americanus
ENSELUG00000004211	pdcd11	99	44.338	ENSUMAG00000023567	PDCD11	94	63.037	Ursus_maritimus
ENSELUG00000004211	pdcd11	70	54.023	ENSVPAG00000007405	PDCD11	73	54.023	Vicugna_pacos
ENSELUG00000004211	pdcd11	99	45.638	ENSVVUG00000004457	PDCD11	99	45.774	Vulpes_vulpes
ENSELUG00000004211	pdcd11	99	44.539	ENSXETG00000009482	pdcd11	94	66.185	Xenopus_tropicalis
ENSELUG00000004211	pdcd11	99	49.618	ENSXCOG00000012420	pdcd11	100	49.727	Xiphophorus_couchianus
ENSELUG00000004211	pdcd11	99	58.530	ENSXMAG00000004638	pdcd11	100	58.717	Xiphophorus_maculatus