EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000004240 (Gene tree)
Gene ID: 105029873
Gene Symbol: trmt12
Alias: zgc:153361
Full Name: tRNA methyltransferase 12 homolog
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 5689 bases
Position: chrLG04:1373543-1379231
Accession: 105029873
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000002936	Met_10	PF02475.16	3.3e-29	1	1
ENSELUP00000027852	Met_10	PF02475.16	3.9e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000014874	-	4236	XM_010903438	ENSELUP00000027852	407 (aa)	XP_010901740	UPI000577E268
ENSELUT00000014852	-	4439	-	ENSELUP00000002936	375 (aa)	-	-

Gene Model

Click here to download ENSELUG00000004240's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000004240's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000004240	trmt12	99	51.889	ENSG00000183665	TRMT12	92	51.202	Homo_sapiens
ENSELUG00000004240	trmt12	99	67.473	ENSAPOG00000011979	trmt12	99	66.749	Acanthochromis_polyacanthus
ENSELUG00000004240	trmt12	99	51.392	ENSAMEG00000019612	TRMT12	93	50.721	Ailuropoda_melanoleuca
ENSELUG00000004240	trmt12	99	64.247	ENSACIG00000012982	trmt12	99	63.144	Amphilophus_citrinellus
ENSELUG00000004240	trmt12	99	65.860	ENSAOCG00000020570	trmt12	99	65.104	Amphiprion_ocellaris
ENSELUG00000004240	trmt12	99	66.129	ENSAPEG00000006335	trmt12	99	65.365	Amphiprion_percula
ENSELUG00000004240	trmt12	99	65.323	ENSATEG00000018316	trmt12	99	65.271	Anabas_testudineus
ENSELUG00000004240	trmt12	99	67.204	ENSACLG00000001008	trmt12	99	65.517	Astatotilapia_calliptera
ENSELUG00000004240	trmt12	100	61.183	ENSAMXG00000040366	trmt12	99	60.570	Astyanax_mexicanus
ENSELUG00000004240	trmt12	99	50.508	ENSBTAG00000020398	TRMT12	90	49.639	Bos_taurus
ENSELUG00000004240	trmt12	58	35.945	WBGene00009586	F40F9.10	50	34.483	Caenorhabditis_elegans
ENSELUG00000004240	trmt12	99	50.378	ENSCJAG00000022174	TRMT12	93	49.761	Callithrix_jacchus
ENSELUG00000004240	trmt12	99	52.658	ENSCAFG00000001040	TRMT12	95	51.923	Canis_familiaris
ENSELUG00000004240	trmt12	99	52.658	ENSCAFG00020006500	TRMT12	95	51.923	Canis_lupus_dingo
ENSELUG00000004240	trmt12	99	50.254	ENSCHIG00000016574	TRMT12	95	49.639	Capra_hircus
ENSELUG00000004240	trmt12	99	50.639	ENSCPOG00000026520	TRMT12	93	49.879	Cavia_porcellus
ENSELUG00000004240	trmt12	99	50.886	ENSCSAG00000018615	TRMT12	93	50.000	Chlorocebus_sabaeus
ENSELUG00000004240	trmt12	100	52.088	ENSCPBG00000014290	TRMT12	93	51.408	Chrysemys_picta_bellii
ENSELUG00000004240	trmt12	77	44.407	ENSCING00000019633	-	97	44.407	Ciona_intestinalis
ENSELUG00000004240	trmt12	83	42.540	ENSCSAVG00000000415	-	98	42.540	Ciona_savignyi
ENSELUG00000004240	trmt12	100	51.047	ENSCGRG00001014834	Trmt12	95	50.372	Cricetulus_griseus_chok1gshd
ENSELUG00000004240	trmt12	99	62.234	ENSCSEG00000002675	trmt12	95	61.765	Cynoglossus_semilaevis
ENSELUG00000004240	trmt12	99	64.611	ENSCVAG00000005590	trmt12	99	63.145	Cyprinodon_variegatus
ENSELUG00000004240	trmt12	100	61.614	ENSDARG00000060338	trmt12	100	61.614	Danio_rerio
ENSELUG00000004240	trmt12	99	48.354	ENSETEG00000009373	TRMT12	93	47.596	Echinops_telfairi
ENSELUG00000004240	trmt12	99	50.505	ENSEASG00005022441	TRMT12	95	50.120	Equus_asinus_asinus
ENSELUG00000004240	trmt12	99	50.127	ENSEEUG00000004844	TRMT12	93	49.758	Erinaceus_europaeus
ENSELUG00000004240	trmt12	71	57.895	ENSFALG00000003825	TRMT12	94	66.341	Ficedula_albicollis
ENSELUG00000004240	trmt12	99	50.127	ENSFDAG00000016647	TRMT12	95	49.519	Fukomys_damarensis
ENSELUG00000004240	trmt12	99	54.667	ENSFHEG00000017338	trmt12	96	54.450	Fundulus_heteroclitus
ENSELUG00000004240	trmt12	85	58.580	ENSGALG00000006773	TRMT12	76	57.429	Gallus_gallus
ENSELUG00000004240	trmt12	99	62.634	ENSGAFG00000020056	trmt12	99	61.330	Gambusia_affinis
ENSELUG00000004240	trmt12	98	64.850	ENSGACG00000017351	trmt12	99	63.496	Gasterosteus_aculeatus
ENSELUG00000004240	trmt12	100	52.723	ENSGAGG00000006032	TRMT12	95	52.009	Gopherus_agassizii
ENSELUG00000004240	trmt12	99	66.667	ENSHBUG00000016412	trmt12	99	65.025	Haplochromis_burtoni
ENSELUG00000004240	trmt12	99	51.637	ENSHGLG00000020498	TRMT12	95	50.957	Heterocephalus_glaber_female
ENSELUG00000004240	trmt12	99	51.637	ENSHGLG00100020132	TRMT12	95	50.957	Heterocephalus_glaber_male
ENSELUG00000004240	trmt12	99	61.538	ENSHCOG00000005050	trmt12	96	64.793	Hippocampus_comes
ENSELUG00000004240	trmt12	100	58.311	ENSIPUG00000018011	trmt12	92	56.934	Ictalurus_punctatus
ENSELUG00000004240	trmt12	99	51.646	ENSSTOG00000030617	TRMT12	95	51.079	Ictidomys_tridecemlineatus
ENSELUG00000004240	trmt12	99	62.933	ENSKMAG00000000891	trmt12	100	61.614	Kryptolebias_marmoratus
ENSELUG00000004240	trmt12	99	60.160	ENSLBEG00000028712	trmt12	99	59.852	Labrus_bergylta
ENSELUG00000004240	trmt12	58	69.124	ENSLBEG00000017456	-	88	69.124	Labrus_bergylta
ENSELUG00000004240	trmt12	99	52.381	ENSLACG00000015869	TRMT12	94	52.257	Latimeria_chalumnae
ENSELUG00000004240	trmt12	100	59.151	ENSLOCG00000015290	trmt12	99	58.519	Lepisosteus_oculatus
ENSELUG00000004240	trmt12	99	50.636	ENSLAFG00000012519	TRMT12	95	50.000	Loxodonta_africana
ENSELUG00000004240	trmt12	99	50.886	ENSMMUG00000015490	TRMT12	93	50.000	Macaca_mulatta
ENSELUG00000004240	trmt12	99	65.867	ENSMAMG00000020311	trmt12	99	64.865	Mastacembelus_armatus
ENSELUG00000004240	trmt12	99	67.204	ENSMZEG00005007349	trmt12	99	65.517	Maylandia_zebra
ENSELUG00000004240	trmt12	99	53.061	ENSMGAG00000004174	TRMT12	95	51.667	Meleagris_gallopavo
ENSELUG00000004240	trmt12	100	62.933	ENSMMOG00000000412	trmt12	100	62.408	Mola_mola
ENSELUG00000004240	trmt12	99	51.587	ENSMODG00000021403	-	92	50.498	Monodelphis_domestica
ENSELUG00000004240	trmt12	99	50.265	ENSMODG00000011798	-	85	49.257	Monodelphis_domestica
ENSELUG00000004240	trmt12	99	66.043	ENSMALG00000008668	trmt12	99	65.271	Monopterus_albus
ENSELUG00000004240	trmt12	99	50.254	MGP_CAROLIEiJ_G0019820	Trmt12	93	49.639	Mus_caroli
ENSELUG00000004240	trmt12	99	51.145	ENSMUSG00000037085	Trmt12	93	50.240	Mus_musculus
ENSELUG00000004240	trmt12	99	51.786	MGP_PahariEiJ_G0019829	Trmt12	93	50.843	Mus_pahari
ENSELUG00000004240	trmt12	100	50.633	MGP_SPRETEiJ_G0020717	Trmt12	93	50.000	Mus_spretus
ENSELUG00000004240	trmt12	99	51.646	ENSMPUG00000019150	TRMT12	93	51.202	Mustela_putorius_furo
ENSELUG00000004240	trmt12	99	50.886	ENSMLUG00000003753	TRMT12	95	50.240	Myotis_lucifugus
ENSELUG00000004240	trmt12	99	49.114	ENSNGAG00000014548	Trmt12	95	48.317	Nannospalax_galili
ENSELUG00000004240	trmt12	99	66.488	ENSNBRG00000021510	trmt12	99	65.111	Neolamprologus_brichardi
ENSELUG00000004240	trmt12	99	48.615	ENSOPRG00000008067	TRMT12	93	47.857	Ochotona_princeps
ENSELUG00000004240	trmt12	99	51.269	ENSODEG00000018933	TRMT12	95	50.240	Octodon_degus
ENSELUG00000004240	trmt12	99	66.129	ENSONIG00000002614	trmt12	99	64.778	Oreochromis_niloticus
ENSELUG00000004240	trmt12	100	48.731	ENSOANG00000009987	TRMT12	96	48.434	Ornithorhynchus_anatinus
ENSELUG00000004240	trmt12	99	47.236	ENSOCUG00000026379	TRMT12	96	46.420	Oryctolagus_cuniculus
ENSELUG00000004240	trmt12	99	61.559	ENSORLG00000001280	trmt12	99	60.591	Oryzias_latipes
ENSELUG00000004240	trmt12	99	60.753	ENSORLG00020000708	trmt12	99	59.852	Oryzias_latipes_hni
ENSELUG00000004240	trmt12	99	61.022	ENSORLG00015012344	trmt12	99	60.099	Oryzias_latipes_hsok
ENSELUG00000004240	trmt12	99	62.366	ENSOMEG00000015267	trmt12	98	61.330	Oryzias_melastigma
ENSELUG00000004240	trmt12	99	50.630	ENSOGAG00000015845	TRMT12	95	50.000	Otolemur_garnettii
ENSELUG00000004240	trmt12	99	61.765	ENSPKIG00000004640	trmt12	99	60.099	Paramormyrops_kingsleyae
ENSELUG00000004240	trmt12	64	59.259	ENSPSIG00000003476	TRMT12	99	59.259	Pelodiscus_sinensis
ENSELUG00000004240	trmt12	99	59.299	ENSPMGG00000016356	trmt12	97	57.494	Periophthalmus_magnuspinnatus
ENSELUG00000004240	trmt12	99	51.323	ENSPCIG00000002967	TRMT12	85	50.374	Phascolarctos_cinereus
ENSELUG00000004240	trmt12	99	63.807	ENSPFOG00000016931	trmt12	96	61.905	Poecilia_formosa
ENSELUG00000004240	trmt12	99	63.636	ENSPLAG00000020621	trmt12	99	62.500	Poecilia_latipinna
ENSELUG00000004240	trmt12	99	64.343	ENSPMEG00000000818	trmt12	99	63.145	Poecilia_mexicana
ENSELUG00000004240	trmt12	99	64.516	ENSPREG00000011621	trmt12	99	63.882	Poecilia_reticulata
ENSELUG00000004240	trmt12	99	51.637	ENSPPYG00000018866	TRMT12	93	50.718	Pongo_abelii
ENSELUG00000004240	trmt12	99	50.127	ENSPCAG00000000556	TRMT12	93	49.522	Procavia_capensis
ENSELUG00000004240	trmt12	99	51.139	ENSPVAG00000009149	TRMT12	93	50.240	Pteropus_vampyrus
ENSELUG00000004240	trmt12	99	66.398	ENSPNYG00000010696	trmt12	99	65.206	Pundamilia_nyererei
ENSELUG00000004240	trmt12	100	59.021	ENSPNAG00000019028	trmt12	99	58.333	Pygocentrus_nattereri
ENSELUG00000004240	trmt12	99	51.015	ENSRNOG00000008978	Trmt12	95	50.361	Rattus_norvegicus
ENSELUG00000004240	trmt12	99	49.471	ENSSHAG00000003345	TRMT12	92	48.379	Sarcophilus_harrisii
ENSELUG00000004240	trmt12	99	59.740	ENSSFOG00015006090	trmt12	99	58.513	Scleropages_formosus
ENSELUG00000004240	trmt12	100	66.400	ENSSMAG00000013247	trmt12	100	65.602	Scophthalmus_maximus
ENSELUG00000004240	trmt12	99	66.310	ENSSDUG00000006168	trmt12	99	65.764	Seriola_dumerili
ENSELUG00000004240	trmt12	99	66.398	ENSSLDG00000025007	trmt12	99	65.764	Seriola_lalandi_dorsalis
ENSELUG00000004240	trmt12	100	53.218	ENSSPUG00000005321	TRMT12	94	52.471	Sphenodon_punctatus
ENSELUG00000004240	trmt12	99	67.204	ENSSPAG00000009435	trmt12	97	66.010	Stegastes_partitus
ENSELUG00000004240	trmt12	99	49.762	ENSTGUG00000002280	TRMT12	99	50.239	Taeniopygia_guttata
ENSELUG00000004240	trmt12	99	62.865	ENSTRUG00000011548	trmt12	99	61.614	Takifugu_rubripes
ENSELUG00000004240	trmt12	97	62.022	ENSTNIG00000016866	trmt12	99	59.024	Tetraodon_nigroviridis
ENSELUG00000004240	trmt12	100	50.758	ENSUAMG00000002067	TRMT12	96	50.120	Ursus_americanus
ENSELUG00000004240	trmt12	99	51.139	ENSVPAG00000006519	TRMT12	93	50.481	Vicugna_pacos
ENSELUG00000004240	trmt12	99	52.152	ENSVVUG00000016790	TRMT12	93	51.442	Vulpes_vulpes
ENSELUG00000004240	trmt12	99	53.457	ENSXETG00000009641	trmt12	95	51.852	Xenopus_tropicalis
ENSELUG00000004240	trmt12	99	62.500	ENSXCOG00000016505	trmt12	99	61.707	Xiphophorus_couchianus
ENSELUG00000004240	trmt12	99	63.369	ENSXMAG00000025318	trmt12	99	62.500	Xiphophorus_maculatus