EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000004389 (Gene tree)
Gene ID: 105021695
Gene Symbol: sall2
Alias: fc29e07|sb:cb763|si:ch211-10e2.7|wu:fc29e07
Full Name: sal-like protein 2
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 291509 bases
Position: chrLG03:15535891-15827399
Accession: 105021578
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000027965	zf-C2H2	PF00096.26	2.5e-25	1	4
ENSELUP00000027965	zf-C2H2	PF00096.26	2.5e-25	2	4
ENSELUP00000027965	zf-C2H2	PF00096.26	2.5e-25	3	4
ENSELUP00000027965	zf-C2H2	PF00096.26	2.5e-25	4	4
ENSELUP00000003103	zf-C2H2	PF00096.26	2.9e-16	1	2
ENSELUP00000003103	zf-C2H2	PF00096.26	2.9e-16	2	2
ENSELUP00000003086	zf-C2H2	PF00096.26	8.5e-12	1	1
ENSELUP00000003103	zf-met	PF12874.7	2.2e-10	1	2
ENSELUP00000003103	zf-met	PF12874.7	2.2e-10	2	2
ENSELUP00000027965	zf-met	PF12874.7	1.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000014601	-	3640	XM_020041739	ENSELUP00000003086	517 (aa)	XP_019897298	-
ENSELUT00000014580	-	8103	XM_010889355	ENSELUP00000003103	1391 (aa)	XP_010887657	UPI000576DD91
ENSELUT00000014592	-	1467	-	ENSELUP00000027965	488 (aa)	-	-

Gene Model

Click here to download ENSELUG00000004389's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000004389's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000004389	sall2	66	48.045	ENSELUG00000021391	-	79	48.045
ENSELUG00000004389	sall2	50	43.750	ENSELUG00000005912	-	86	43.750
ENSELUG00000004389	sall2	60	50.000	ENSELUG00000013806	-	78	50.000
ENSELUG00000004389	sall2	73	41.176	ENSELUG00000021560	-	92	39.521
ENSELUG00000004389	sall2	58	34.975	ENSELUG00000021381	-	87	36.697
ENSELUG00000004389	sall2	68	46.286	ENSELUG00000012986	-	68	46.286
ENSELUG00000004389	sall2	54	48.333	ENSELUG00000001968	-	76	48.333
ENSELUG00000004389	sall2	59	47.297	ENSELUG00000013321	-	91	48.951
ENSELUG00000004389	sall2	78	50.909	ENSELUG00000022942	-	88	50.909

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000004389	sall2	99	56.945	ENSAPOG00000015347	sall2	99	56.120	Acanthochromis_polyacanthus
ENSELUG00000004389	sall2	53	81.982	ENSAPOG00000013387	si:ch211-212k18.5	71	50.000	Acanthochromis_polyacanthus
ENSELUG00000004389	sall2	66	48.421	ENSACIG00000019922	si:ch211-212k18.5	67	50.339	Amphilophus_citrinellus
ENSELUG00000004389	sall2	99	56.618	ENSAOCG00000016559	sall2	99	56.389	Amphiprion_ocellaris
ENSELUG00000004389	sall2	67	49.896	ENSAOCG00000010737	si:ch211-212k18.5	69	48.697	Amphiprion_ocellaris
ENSELUG00000004389	sall2	67	49.791	ENSAPEG00000006751	si:ch211-212k18.5	69	48.697	Amphiprion_percula
ENSELUG00000004389	sall2	63	61.863	ENSAPEG00000020215	sall2	93	59.930	Amphiprion_percula
ENSELUG00000004389	sall2	88	58.709	ENSATEG00000007303	sall2	94	56.281	Anabas_testudineus
ENSELUG00000004389	sall2	67	48.262	ENSATEG00000001254	si:ch211-212k18.5	73	50.265	Anabas_testudineus
ENSELUG00000004389	sall2	88	57.668	ENSACLG00000019867	sall2	94	55.317	Astatotilapia_calliptera
ENSELUG00000004389	sall2	72	51.931	ENSACLG00000009709	si:ch211-212k18.5	85	49.308	Astatotilapia_calliptera
ENSELUG00000004389	sall2	64	57.143	ENSAMXG00000010979	si:ch211-212k18.5	71	50.802	Astyanax_mexicanus
ENSELUG00000004389	sall2	87	47.454	ENSAMXG00000020956	sall2	58	55.785	Astyanax_mexicanus
ENSELUG00000004389	sall2	87	52.793	ENSCSEG00000021148	sall2	97	50.284	Cynoglossus_semilaevis
ENSELUG00000004389	sall2	71	42.673	ENSCSEG00000004426	si:ch211-212k18.5	70	48.254	Cynoglossus_semilaevis
ENSELUG00000004389	sall2	87	51.738	ENSCVAG00000006032	sall2	93	49.544	Cyprinodon_variegatus
ENSELUG00000004389	sall2	66	48.726	ENSCVAG00000007475	si:ch211-212k18.5	70	48.879	Cyprinodon_variegatus
ENSELUG00000004389	sall2	91	48.257	ENSDARG00000075116	sall2	93	47.381	Danio_rerio
ENSELUG00000004389	sall2	66	51.832	ENSDARG00000103316	si:ch211-212k18.5	53	52.210	Danio_rerio
ENSELUG00000004389	sall2	87	52.690	ENSFHEG00000017550	sall2	93	50.249	Fundulus_heteroclitus
ENSELUG00000004389	sall2	96	41.486	ENSFHEG00000017264	si:ch211-212k18.5	83	47.492	Fundulus_heteroclitus
ENSELUG00000004389	sall2	62	60.870	ENSGAFG00000003746	si:ch211-212k18.5	72	72.222	Gambusia_affinis
ENSELUG00000004389	sall2	87	52.932	ENSGAFG00000015194	sall2	93	50.954	Gambusia_affinis
ENSELUG00000004389	sall2	98	55.641	ENSHBUG00000002882	sall2	99	54.841	Haplochromis_burtoni
ENSELUG00000004389	sall2	72	52.039	ENSHBUG00000019672	si:ch211-212k18.5	85	49.308	Haplochromis_burtoni
ENSELUG00000004389	sall2	59	51.261	ENSHCOG00000002842	si:ch211-212k18.5	68	48.319	Hippocampus_comes
ENSELUG00000004389	sall2	58	58.031	ENSIPUG00000002559	sall2	74	50.263	Ictalurus_punctatus
ENSELUG00000004389	sall2	87	53.386	ENSKMAG00000020172	sall2	92	51.201	Kryptolebias_marmoratus
ENSELUG00000004389	sall2	64	72.727	ENSLBEG00000020887	si:ch211-212k18.5	69	72.727	Labrus_bergylta
ENSELUG00000004389	sall2	90	57.879	ENSMAMG00000016229	sall2	95	55.278	Mastacembelus_armatus
ENSELUG00000004389	sall2	66	50.743	ENSMAMG00000015887	si:ch211-212k18.5	76	50.877	Mastacembelus_armatus
ENSELUG00000004389	sall2	98	55.641	ENSMZEG00005012103	sall2	99	54.841	Maylandia_zebra
ENSELUG00000004389	sall2	72	51.931	ENSMZEG00005021214	si:ch211-212k18.5	85	49.308	Maylandia_zebra
ENSELUG00000004389	sall2	68	52.724	ENSNBRG00000017645	sall2	97	51.829	Neolamprologus_brichardi
ENSELUG00000004389	sall2	66	51.288	ENSNBRG00000023948	si:ch211-212k18.5	72	49.038	Neolamprologus_brichardi
ENSELUG00000004389	sall2	87	54.712	ENSORLG00000026871	sall2	92	52.269	Oryzias_latipes
ENSELUG00000004389	sall2	68	75.862	ENSORLG00000030429	si:ch211-212k18.5	74	71.795	Oryzias_latipes
ENSELUG00000004389	sall2	87	54.916	ENSORLG00020007873	sall2	92	52.689	Oryzias_latipes_hni
ENSELUG00000004389	sall2	68	73.529	ENSORLG00020008145	si:ch211-212k18.5	74	71.795	Oryzias_latipes_hni
ENSELUG00000004389	sall2	87	54.792	ENSORLG00015002422	sall2	92	52.269	Oryzias_latipes_hsok
ENSELUG00000004389	sall2	66	47.992	ENSOMEG00000013949	si:ch211-212k18.5	70	47.720	Oryzias_melastigma
ENSELUG00000004389	sall2	87	54.849	ENSOMEG00000012904	sall2	93	52.711	Oryzias_melastigma
ENSELUG00000004389	sall2	77	57.156	ENSPKIG00000009207	sall2	98	51.946	Paramormyrops_kingsleyae
ENSELUG00000004389	sall2	73	47.797	ENSPMGG00000018714	si:ch211-212k18.5	58	47.761	Periophthalmus_magnuspinnatus
ENSELUG00000004389	sall2	87	52.969	ENSPFOG00000016504	sall2	95	50.394	Poecilia_formosa
ENSELUG00000004389	sall2	64	53.556	ENSPFOG00000023705	si:ch211-212k18.5	74	48.081	Poecilia_formosa
ENSELUG00000004389	sall2	73	46.770	ENSPLAG00000002577	si:ch211-212k18.5	70	48.346	Poecilia_latipinna
ENSELUG00000004389	sall2	87	53.021	ENSPLAG00000018320	sall2	93	51.376	Poecilia_latipinna
ENSELUG00000004389	sall2	87	53.090	ENSPMEG00000006335	sall2	93	51.586	Poecilia_mexicana
ENSELUG00000004389	sall2	87	53.063	ENSPREG00000021908	sall2	93	51.462	Poecilia_reticulata
ENSELUG00000004389	sall2	66	51.502	ENSPNYG00000021576	si:ch211-212k18.5	69	48.611	Pundamilia_nyererei
ENSELUG00000004389	sall2	86	46.817	ENSPNAG00000021463	sall2	58	54.830	Pygocentrus_nattereri
ENSELUG00000004389	sall2	96	57.153	ENSSMAG00000014157	sall2	99	55.387	Scophthalmus_maximus
ENSELUG00000004389	sall2	66	51.441	ENSSDUG00000006164	si:ch211-212k18.5	71	65.714	Seriola_dumerili
ENSELUG00000004389	sall2	99	57.917	ENSSDUG00000012274	sall2	99	57.540	Seriola_dumerili
ENSELUG00000004389	sall2	99	57.569	ENSSLDG00000001653	sall2	99	57.192	Seriola_lalandi_dorsalis
ENSELUG00000004389	sall2	69	56.522	ENSSLDG00000003393	si:ch211-212k18.5	72	54.167	Seriola_lalandi_dorsalis
ENSELUG00000004389	sall2	99	57.153	ENSSPAG00000023009	sall2	99	56.086	Stegastes_partitus
ENSELUG00000004389	sall2	89	51.719	ENSTRUG00000024556	sall2	95	49.518	Takifugu_rubripes
ENSELUG00000004389	sall2	62	58.696	ENSXCOG00000000762	si:ch211-212k18.5	73	58.696	Xiphophorus_couchianus
ENSELUG00000004389	sall2	87	53.450	ENSXMAG00000000902	sall2	93	51.207	Xiphophorus_maculatus