EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000004425 (Gene tree)
Gene ID: 105028457
Gene Symbol: pus3
Alias: fj78b12|wu:fj78b12|zgc:56653
Full Name: pseudouridine synthase 3
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 8472 bases
Position: chrLG05:29222693-29231164
Accession: 105028457
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000003125	PseudoU_synth_1	PF01416.20	4.9e-30	1	1
ENSELUP00000003147	PseudoU_synth_1	PF01416.20	6e-30	1	1
ENSELUP00000027998	PseudoU_synth_1	PF01416.20	6.9e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000014525	-	2568	XM_010901217	ENSELUP00000003147	494 (aa)	XP_010899519	UPI000576962B
ENSELUT00000014514	-	2773	XM_020046193	ENSELUP00000027998	518 (aa)	XP_019901752	UPI0009732276
ENSELUT00000014547	-	1362	-	ENSELUP00000003125	453 (aa)	-	-

Gene Model

Click here to download ENSELUG00000004425's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000004425's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000004425	pus3	92	55.125	ENSG00000110060	PUS3	94	59.302	Homo_sapiens
ENSELUG00000004425	pus3	97	76.871	ENSAPOG00000019483	pus3	99	76.871	Acanthochromis_polyacanthus
ENSELUG00000004425	pus3	92	54.545	ENSAMEG00000000144	PUS3	89	54.442	Ailuropoda_melanoleuca
ENSELUG00000004425	pus3	79	85.714	ENSACIG00000024479	pus3	100	85.714	Amphilophus_citrinellus
ENSELUG00000004425	pus3	98	74.242	ENSAOCG00000006589	pus3	97	74.242	Amphiprion_ocellaris
ENSELUG00000004425	pus3	98	74.130	ENSAPEG00000014617	pus3	97	74.130	Amphiprion_percula
ENSELUG00000004425	pus3	99	75.492	ENSATEG00000022731	pus3	98	75.492	Anabas_testudineus
ENSELUG00000004425	pus3	91	57.143	ENSAPLG00000013285	PUS3	98	57.143	Anas_platyrhynchos
ENSELUG00000004425	pus3	92	53.759	ENSACAG00000000186	PUS3	94	53.653	Anolis_carolinensis
ENSELUG00000004425	pus3	92	54.670	ENSANAG00000035614	PUS3	88	54.566	Aotus_nancymaae
ENSELUG00000004425	pus3	97	72.807	ENSACLG00000007356	pus3	97	72.807	Astatotilapia_calliptera
ENSELUG00000004425	pus3	97	69.130	ENSAMXG00000019534	pus3	96	69.828	Astyanax_mexicanus
ENSELUG00000004425	pus3	92	53.273	ENSBTAG00000014339	PUS3	89	53.515	Bos_taurus
ENSELUG00000004425	pus3	79	36.022	WBGene00006473	tag-124	94	35.677	Caenorhabditis_elegans
ENSELUG00000004425	pus3	92	55.329	ENSCJAG00000046645	PUS3	88	55.227	Callithrix_jacchus
ENSELUG00000004425	pus3	92	53.653	ENSCAFG00000010534	PUS3	88	53.547	Canis_familiaris
ENSELUG00000004425	pus3	92	53.653	ENSCAFG00020010659	PUS3	88	53.547	Canis_lupus_dingo
ENSELUG00000004425	pus3	92	53.531	ENSCHIG00000012260	PUS3	89	53.881	Capra_hircus
ENSELUG00000004425	pus3	92	54.545	ENSTSYG00000014744	PUS3	88	54.442	Carlito_syrichta
ENSELUG00000004425	pus3	92	53.075	ENSCAPG00000012231	PUS3	89	52.968	Cavia_aperea
ENSELUG00000004425	pus3	92	53.075	ENSCPOG00000032587	PUS3	89	52.968	Cavia_porcellus
ENSELUG00000004425	pus3	92	55.581	ENSCCAG00000035999	PUS3	89	55.479	Cebus_capucinus
ENSELUG00000004425	pus3	92	54.875	ENSCATG00000043123	PUS3	89	54.773	Cercocebus_atys
ENSELUG00000004425	pus3	92	54.299	ENSCLAG00000014947	PUS3	88	54.195	Chinchilla_lanigera
ENSELUG00000004425	pus3	92	54.897	ENSCSAG00000002281	PUS3	89	55.227	Chlorocebus_sabaeus
ENSELUG00000004425	pus3	82	55.053	ENSCHOG00000008442	PUS3	96	55.053	Choloepus_hoffmanni
ENSELUG00000004425	pus3	53	50.763	ENSCPBG00000011173	PUS3	80	55.066	Chrysemys_picta_bellii
ENSELUG00000004425	pus3	69	38.218	ENSCING00000009062	-	67	38.218	Ciona_intestinalis
ENSELUG00000004425	pus3	88	34.318	ENSCSAVG00000002211	-	98	34.318	Ciona_savignyi
ENSELUG00000004425	pus3	92	55.204	ENSCANG00000038729	PUS3	89	55.000	Colobus_angolensis_palliatus
ENSELUG00000004425	pus3	92	54.670	ENSCGRG00001019842	Pus3	89	54.566	Cricetulus_griseus_chok1gshd
ENSELUG00000004425	pus3	92	54.214	ENSCGRG00000010155	Pus3	89	54.110	Cricetulus_griseus_crigri
ENSELUG00000004425	pus3	98	71.171	ENSCSEG00000007948	pus3	96	71.622	Cynoglossus_semilaevis
ENSELUG00000004425	pus3	99	68.980	ENSCVAG00000022150	pus3	98	68.980	Cyprinodon_variegatus
ENSELUG00000004425	pus3	97	74.887	ENSDARG00000028976	pus3	95	73.756	Danio_rerio
ENSELUG00000004425	pus3	92	52.242	ENSDNOG00000040719	PUS3	90	51.739	Dasypus_novemcinctus
ENSELUG00000004425	pus3	92	54.817	ENSDORG00000001819	Pus3	88	54.713	Dipodomys_ordii
ENSELUG00000004425	pus3	91	41.053	FBgn0034703	CG3045	92	41.053	Drosophila_melanogaster
ENSELUG00000004425	pus3	92	48.416	ENSETEG00000013067	PUS3	89	47.598	Echinops_telfairi
ENSELUG00000004425	pus3	82	53.917	ENSEBUG00000002154	pus3	62	53.917	Eptatretus_burgeri
ENSELUG00000004425	pus3	92	54.545	ENSEASG00005023003	PUS3	89	54.442	Equus_asinus_asinus
ENSELUG00000004425	pus3	92	54.214	ENSECAG00000007581	PUS3	89	54.110	Equus_caballus
ENSELUG00000004425	pus3	92	52.370	ENSEEUG00000010543	PUS3	89	52.715	Erinaceus_europaeus
ENSELUG00000004425	pus3	91	53.741	ENSFCAG00000005340	PUS3	88	53.636	Felis_catus
ENSELUG00000004425	pus3	95	54.825	ENSFALG00000005159	PUS3	90	56.221	Ficedula_albicollis
ENSELUG00000004425	pus3	95	52.863	ENSFDAG00000020745	PUS3	88	53.547	Fukomys_damarensis
ENSELUG00000004425	pus3	99	72.149	ENSFHEG00000010984	pus3	91	71.398	Fundulus_heteroclitus
ENSELUG00000004425	pus3	97	68.623	ENSGMOG00000004534	pus3	100	68.623	Gadus_morhua
ENSELUG00000004425	pus3	92	56.335	ENSGALG00000000962	PUS3	93	56.621	Gallus_gallus
ENSELUG00000004425	pus3	99	70.905	ENSGAFG00000005615	pus3	98	71.215	Gambusia_affinis
ENSELUG00000004425	pus3	98	74.720	ENSGACG00000002125	pus3	96	74.720	Gasterosteus_aculeatus
ENSELUG00000004425	pus3	98	53.165	ENSGAGG00000000160	PUS3	87	55.581	Gopherus_agassizii
ENSELUG00000004425	pus3	92	55.329	ENSGGOG00000015047	PUS3	89	55.227	Gorilla_gorilla
ENSELUG00000004425	pus3	97	72.368	ENSHBUG00000016532	pus3	97	72.368	Haplochromis_burtoni
ENSELUG00000004425	pus3	92	48.718	ENSHGLG00000006599	-	84	48.826	Heterocephalus_glaber_female
ENSELUG00000004425	pus3	92	53.303	ENSHGLG00000000565	PUS3	88	53.196	Heterocephalus_glaber_female
ENSELUG00000004425	pus3	62	59.717	ENSHGLG00000015753	-	77	59.717	Heterocephalus_glaber_female
ENSELUG00000004425	pus3	93	48.387	ENSHGLG00000018861	-	89	48.926	Heterocephalus_glaber_female
ENSELUG00000004425	pus3	69	56.329	ENSHGLG00100008656	-	96	56.013	Heterocephalus_glaber_male
ENSELUG00000004425	pus3	74	50.872	ENSHGLG00100007519	-	76	50.872	Heterocephalus_glaber_male
ENSELUG00000004425	pus3	93	45.035	ENSHGLG00100011339	-	89	45.455	Heterocephalus_glaber_male
ENSELUG00000004425	pus3	92	50.113	ENSHGLG00100014825	-	88	50.459	Heterocephalus_glaber_male
ENSELUG00000004425	pus3	64	53.082	ENSHGLG00100002435	-	96	53.082	Heterocephalus_glaber_male
ENSELUG00000004425	pus3	99	73.568	ENSHCOG00000015705	pus3	100	73.568	Hippocampus_comes
ENSELUG00000004425	pus3	97	71.778	ENSIPUG00000000105	pus3	95	72.222	Ictalurus_punctatus
ENSELUG00000004425	pus3	92	54.338	ENSSTOG00000003721	PUS3	89	54.233	Ictidomys_tridecemlineatus
ENSELUG00000004425	pus3	86	54.390	ENSJJAG00000011306	Pus3	89	53.440	Jaculus_jaculus
ENSELUG00000004425	pus3	99	73.093	ENSKMAG00000016715	pus3	98	73.474	Kryptolebias_marmoratus
ENSELUG00000004425	pus3	95	72.854	ENSLBEG00000004143	pus3	98	72.297	Labrus_bergylta
ENSELUG00000004425	pus3	93	53.125	ENSLACG00000011161	PUS3	89	52.550	Latimeria_chalumnae
ENSELUG00000004425	pus3	96	67.763	ENSLOCG00000011922	pus3	99	67.991	Lepisosteus_oculatus
ENSELUG00000004425	pus3	92	52.941	ENSLAFG00000000535	PUS3	90	51.852	Loxodonta_africana
ENSELUG00000004425	pus3	92	54.649	ENSMFAG00000041002	PUS3	89	54.545	Macaca_fascicularis
ENSELUG00000004425	pus3	92	54.649	ENSMMUG00000041875	PUS3	89	54.545	Macaca_mulatta
ENSELUG00000004425	pus3	92	54.649	ENSMNEG00000045347	PUS3	89	54.545	Macaca_nemestrina
ENSELUG00000004425	pus3	92	54.875	ENSMLEG00000029053	PUS3	89	54.773	Mandrillus_leucophaeus
ENSELUG00000004425	pus3	98	72.648	ENSMAMG00000016741	pus3	97	72.926	Mastacembelus_armatus
ENSELUG00000004425	pus3	97	72.588	ENSMZEG00005015950	pus3	97	72.588	Maylandia_zebra
ENSELUG00000004425	pus3	81	59.946	ENSMGAG00000000851	PUS3	93	59.946	Meleagris_gallopavo
ENSELUG00000004425	pus3	92	54.795	ENSMAUG00000015873	Pus3	89	54.691	Mesocricetus_auratus
ENSELUG00000004425	pus3	92	52.500	ENSMICG00000032941	PUS3	89	52.392	Microcebus_murinus
ENSELUG00000004425	pus3	92	54.338	ENSMOCG00000004901	Pus3	89	54.233	Microtus_ochrogaster
ENSELUG00000004425	pus3	97	76.471	ENSMMOG00000013909	pus3	95	76.471	Mola_mola
ENSELUG00000004425	pus3	92	51.902	ENSMODG00000004222	PUS3	96	52.135	Monodelphis_domestica
ENSELUG00000004425	pus3	99	74.781	ENSMALG00000022420	pus3	98	74.781	Monopterus_albus
ENSELUG00000004425	pus3	92	53.741	MGP_CAROLIEiJ_G0031957	Pus3	97	58.805	Mus_caroli
ENSELUG00000004425	pus3	92	53.741	ENSMUSG00000032103	Pus3	97	58.805	Mus_musculus
ENSELUG00000004425	pus3	95	52.412	MGP_PahariEiJ_G0014822	Pus3	97	59.119	Mus_pahari
ENSELUG00000004425	pus3	92	53.968	MGP_SPRETEiJ_G0033081	Pus3	97	59.119	Mus_spretus
ENSELUG00000004425	pus3	92	55.000	ENSMPUG00000006568	PUS3	89	54.897	Mustela_putorius_furo
ENSELUG00000004425	pus3	95	53.070	ENSMLUG00000030636	PUS3	89	53.531	Myotis_lucifugus
ENSELUG00000004425	pus3	92	53.741	ENSNGAG00000013868	Pus3	89	53.636	Nannospalax_galili
ENSELUG00000004425	pus3	96	72.788	ENSNBRG00000015864	pus3	97	72.788	Neolamprologus_brichardi
ENSELUG00000004425	pus3	92	54.773	ENSNLEG00000007460	PUS3	89	55.000	Nomascus_leucogenys
ENSELUG00000004425	pus3	77	62.162	ENSMEUG00000014040	PUS3	73	63.889	Notamacropus_eugenii
ENSELUG00000004425	pus3	95	53.509	ENSOPRG00000007888	-	92	53.509	Ochotona_princeps
ENSELUG00000004425	pus3	95	54.405	ENSODEG00000004280	PUS3	89	54.867	Octodon_degus
ENSELUG00000004425	pus3	97	75.225	ENSONIG00000016224	pus3	98	75.225	Oreochromis_niloticus
ENSELUG00000004425	pus3	99	52.807	ENSOANG00000000406	PUS3	92	52.599	Ornithorhynchus_anatinus
ENSELUG00000004425	pus3	99	52.532	ENSOCUG00000004468	PUS3	84	54.525	Oryctolagus_cuniculus
ENSELUG00000004425	pus3	98	71.116	ENSORLG00000008445	pus3	97	71.179	Oryzias_latipes
ENSELUG00000004425	pus3	98	71.554	ENSORLG00020008847	pus3	97	71.554	Oryzias_latipes_hni
ENSELUG00000004425	pus3	98	71.335	ENSORLG00015007438	pus3	97	71.335	Oryzias_latipes_hsok
ENSELUG00000004425	pus3	98	72.931	ENSOMEG00000014321	pus3	97	72.931	Oryzias_melastigma
ENSELUG00000004425	pus3	92	53.636	ENSOGAG00000008913	PUS3	89	53.531	Otolemur_garnettii
ENSELUG00000004425	pus3	92	53.303	ENSOARG00000011870	PUS3	89	53.653	Ovis_aries
ENSELUG00000004425	pus3	92	54.897	ENSPPAG00000025809	PUS3	89	55.227	Pan_paniscus
ENSELUG00000004425	pus3	91	52.834	ENSPPRG00000005662	PUS3	88	52.727	Panthera_pardus
ENSELUG00000004425	pus3	91	53.515	ENSPTIG00000001192	PUS3	88	53.409	Panthera_tigris_altaica
ENSELUG00000004425	pus3	92	54.897	ENSPTRG00000004449	PUS3	89	55.227	Pan_troglodytes
ENSELUG00000004425	pus3	92	54.422	ENSPANG00000013782	PUS3	89	54.318	Papio_anubis
ENSELUG00000004425	pus3	99	68.750	ENSPKIG00000000646	pus3	99	68.966	Paramormyrops_kingsleyae
ENSELUG00000004425	pus3	98	53.079	ENSPSIG00000013961	PUS3	87	55.275	Pelodiscus_sinensis
ENSELUG00000004425	pus3	90	75.845	ENSPMGG00000000911	pus3	94	75.845	Periophthalmus_magnuspinnatus
ENSELUG00000004425	pus3	92	53.670	ENSPEMG00000009602	Pus3	89	53.793	Peromyscus_maniculatus_bairdii
ENSELUG00000004425	pus3	98	50.420	ENSPCIG00000010225	PUS3	95	52.928	Phascolarctos_cinereus
ENSELUG00000004425	pus3	97	73.815	ENSPFOG00000009447	pus3	100	73.815	Poecilia_formosa
ENSELUG00000004425	pus3	98	72.113	ENSPLAG00000023343	pus3	97	72.668	Poecilia_latipinna
ENSELUG00000004425	pus3	98	72.648	ENSPMEG00000009870	pus3	97	72.885	Poecilia_mexicana
ENSELUG00000004425	pus3	71	72.754	ENSPREG00000003179	pus3	64	73.392	Poecilia_reticulata
ENSELUG00000004425	pus3	92	55.102	ENSPPYG00000004039	PUS3	89	55.000	Pongo_abelii
ENSELUG00000004425	pus3	92	53.864	ENSPCAG00000000441	PUS3	89	53.759	Procavia_capensis
ENSELUG00000004425	pus3	92	53.303	ENSPCOG00000019330	PUS3	89	53.196	Propithecus_coquereli
ENSELUG00000004425	pus3	92	53.531	ENSPVAG00000002606	PUS3	89	53.425	Pteropus_vampyrus
ENSELUG00000004425	pus3	97	73.026	ENSPNYG00000019615	pus3	97	73.026	Pundamilia_nyererei
ENSELUG00000004425	pus3	98	70.996	ENSPNAG00000014541	pus3	95	70.410	Pygocentrus_nattereri
ENSELUG00000004425	pus3	92	53.950	ENSRNOG00000012994	Pus3	89	53.846	Rattus_norvegicus
ENSELUG00000004425	pus3	91	54.378	ENSRBIG00000044456	PUS3	88	54.713	Rhinopithecus_bieti
ENSELUG00000004425	pus3	92	54.442	ENSRROG00000035245	PUS3	89	54.773	Rhinopithecus_roxellana
ENSELUG00000004425	pus3	76	39.031	YFL001W	DEG1	74	39.286	Saccharomyces_cerevisiae
ENSELUG00000004425	pus3	92	55.353	ENSSBOG00000022433	PUS3	88	55.251	Saimiri_boliviensis_boliviensis
ENSELUG00000004425	pus3	92	52.941	ENSSHAG00000001382	PUS3	89	53.182	Sarcophilus_harrisii
ENSELUG00000004425	pus3	99	70.953	ENSSFOG00015004850	pus3	99	71.274	Scleropages_formosus
ENSELUG00000004425	pus3	98	74.464	ENSSMAG00000020340	pus3	97	75.536	Scophthalmus_maximus
ENSELUG00000004425	pus3	98	74.565	ENSSDUG00000020825	pus3	96	76.087	Seriola_dumerili
ENSELUG00000004425	pus3	98	75.870	ENSSLDG00000019932	pus3	96	75.922	Seriola_lalandi_dorsalis
ENSELUG00000004425	pus3	69	55.172	ENSSARG00000013826	PUS3	97	55.172	Sorex_araneus
ENSELUG00000004425	pus3	97	52.361	ENSSPUG00000001412	PUS3	94	52.361	Sphenodon_punctatus
ENSELUG00000004425	pus3	99	75.000	ENSSPAG00000019221	pus3	99	75.000	Stegastes_partitus
ENSELUG00000004425	pus3	92	53.864	ENSSSCG00000015222	PUS3	89	53.759	Sus_scrofa
ENSELUG00000004425	pus3	92	56.193	ENSTGUG00000000778	-	97	56.092	Taeniopygia_guttata
ENSELUG00000004425	pus3	96	71.239	ENSTRUG00000013050	pus3	99	72.506	Takifugu_rubripes
ENSELUG00000004425	pus3	85	69.077	ENSTNIG00000010307	pus3	97	69.077	Tetraodon_nigroviridis
ENSELUG00000004425	pus3	98	71.267	ENSTNIG00000004929	PUS3	96	71.267	Tetraodon_nigroviridis
ENSELUG00000004425	pus3	92	54.091	ENSTBEG00000004382	PUS3	94	53.111	Tupaia_belangeri
ENSELUG00000004425	pus3	92	53.075	ENSTTRG00000012167	PUS3	89	53.653	Tursiops_truncatus
ENSELUG00000004425	pus3	92	54.318	ENSUAMG00000009297	PUS3	89	54.214	Ursus_americanus
ENSELUG00000004425	pus3	92	54.545	ENSUMAG00000001795	PUS3	89	54.442	Ursus_maritimus
ENSELUG00000004425	pus3	92	54.670	ENSVPAG00000001495	PUS3	88	54.566	Vicugna_pacos
ENSELUG00000004425	pus3	92	53.653	ENSVVUG00000020152	PUS3	88	53.547	Vulpes_vulpes
ENSELUG00000004425	pus3	91	53.256	ENSXETG00000024532	pus3	80	53.256	Xenopus_tropicalis
ENSELUG00000004425	pus3	71	77.259	ENSXMAG00000029934	pus3	82	70.360	Xiphophorus_maculatus
ENSELUG00000004425	pus3	57	81.323	ENSXMAG00000025146	pus3	94	71.475	Xiphophorus_maculatus
ENSELUG00000004425	pus3	71	77.500	ENSXMAG00000025659	PUS3	53	78.481	Xiphophorus_maculatus
ENSELUG00000004425	pus3	96	74.142	ENSXMAG00000028016	pus3	95	74.142	Xiphophorus_maculatus
ENSELUG00000004425	pus3	57	81.323	ENSXMAG00000028945	pus3	99	72.910	Xiphophorus_maculatus
ENSELUG00000004425	pus3	71	77.500	ENSXMAG00000025077	pus3	82	70.556	Xiphophorus_maculatus