EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000004448 (Gene tree)
Gene ID: 105014392
Gene Symbol: rabl6b
Alias: si:ch211-102c2.5
Full Name: RAB%2C member RAS oncogene family like 6
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 11835 bases
Position: chrLG13:22751907-22763741
Accession: 105014392
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000028030	MMR_HSR1	PF01926.23	8.6e-05	1	1
ENSELUP00000028001	MMR_HSR1	PF01926.23	9.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000014528	-	1320	-	ENSELUP00000028030	439 (aa)	-	-
ENSELUT00000014538	-	972	-	ENSELUP00000027982	95 (aa)	-	-
ENSELUT00000014487	-	4870	XM_010876673	ENSELUP00000028004	782 (aa)	XP_010874975	UPI0005766745
ENSELUT00000014493	-	4840	XM_010876675	ENSELUP00000028001	772 (aa)	XP_010874977	UPI00057727A5

Gene Model

Click here to download ENSELUG00000004448's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000004448's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000004448	rabl6b	100	61.697	ENSACIG00000010721	rabl6b	88	64.296	Amphilophus_citrinellus
ENSELUG00000004448	rabl6b	100	64.917	ENSATEG00000012055	rabl6b	100	65.565	Anabas_testudineus
ENSELUG00000004448	rabl6b	90	72.397	ENSAMXG00000038771	rabl6b	100	56.962	Astyanax_mexicanus
ENSELUG00000004448	rabl6b	90	69.037	ENSCSEG00000012430	-	94	62.926	Cynoglossus_semilaevis
ENSELUG00000004448	rabl6b	100	61.568	ENSCSEG00000016135	rabl6b	100	62.500	Cynoglossus_semilaevis
ENSELUG00000004448	rabl6b	90	69.635	ENSDARG00000077653	rabl6b	99	61.972	Danio_rerio
ENSELUG00000004448	rabl6b	100	65.026	ENSGAFG00000013561	rabl6b	95	71.861	Gambusia_affinis
ENSELUG00000004448	rabl6b	90	74.771	ENSGACG00000005242	rabl6b	100	62.259	Gasterosteus_aculeatus
ENSELUG00000004448	rabl6b	100	66.321	ENSHBUG00000014235	rabl6b	100	67.098	Haplochromis_burtoni
ENSELUG00000004448	rabl6b	90	74.413	ENSIPUG00000019266	rabl6	100	61.217	Ictalurus_punctatus
ENSELUG00000004448	rabl6b	80	60.406	ENSLOCG00000001402	rabl6b	95	54.030	Lepisosteus_oculatus
ENSELUG00000004448	rabl6b	100	63.030	ENSMAMG00000019516	rabl6b	100	61.196	Mastacembelus_armatus
ENSELUG00000004448	rabl6b	80	66.667	ENSMZEG00005003942	rabl6b	94	67.031	Maylandia_zebra
ENSELUG00000004448	rabl6b	79	75.931	ENSMMOG00000009459	rabl6b	92	65.066	Mola_mola
ENSELUG00000004448	rabl6b	100	66.452	ENSMALG00000002029	rabl6b	100	65.296	Monopterus_albus
ENSELUG00000004448	rabl6b	80	63.708	ENSNBRG00000012512	rabl6b	94	67.028	Neolamprologus_brichardi
ENSELUG00000004448	rabl6b	90	77.644	ENSONIG00000010408	rabl6b	100	63.472	Oreochromis_niloticus
ENSELUG00000004448	rabl6b	90	77.694	ENSORLG00020017557	rabl6b	100	65.256	Oryzias_latipes_hni
ENSELUG00000004448	rabl6b	98	73.589	ENSORLG00015007848	rabl6b	98	73.589	Oryzias_latipes_hsok
ENSELUG00000004448	rabl6b	90	72.727	ENSOMEG00000022840	rabl6b	96	65.517	Oryzias_melastigma
ENSELUG00000004448	rabl6b	72	80.997	ENSPKIG00000007459	RABL6	86	60.584	Paramormyrops_kingsleyae
ENSELUG00000004448	rabl6b	89	69.676	ENSPCIG00000023722	RABL6	90	56.723	Phascolarctos_cinereus
ENSELUG00000004448	rabl6b	100	66.496	ENSPFOG00000003250	rabl6b	100	65.935	Poecilia_formosa
ENSELUG00000004448	rabl6b	100	66.367	ENSPLAG00000019562	rabl6b	100	66.065	Poecilia_latipinna
ENSELUG00000004448	rabl6b	100	67.137	ENSPMEG00000020472	rabl6b	100	65.935	Poecilia_mexicana
ENSELUG00000004448	rabl6b	90	75.172	ENSPREG00000014116	rabl6b	94	67.930	Poecilia_reticulata
ENSELUG00000004448	rabl6b	91	73.020	ENSPNAG00000010857	rabl6b	100	59.307	Pygocentrus_nattereri
ENSELUG00000004448	rabl6b	89	77.017	ENSSFOG00015017388	RABL6	100	58.599	Scleropages_formosus
ENSELUG00000004448	rabl6b	87	74.279	ENSSFOG00015013414	-	99	61.032	Scleropages_formosus
ENSELUG00000004448	rabl6b	90	74.943	ENSSMAG00000012543	rabl6b	95	68.254	Scophthalmus_maximus
ENSELUG00000004448	rabl6b	100	67.871	ENSSDUG00000006564	rabl6b	100	67.179	Seriola_dumerili
ENSELUG00000004448	rabl6b	100	63.178	ENSSPAG00000021033	rabl6b	95	69.364	Stegastes_partitus
ENSELUG00000004448	rabl6b	89	66.820	ENSTNIG00000010595	rabl6b	94	62.808	Tetraodon_nigroviridis