EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000004594 (Gene tree)
Gene ID: 105029632
Gene Symbol: srp19
Alias: -
Full Name: signal recognition particle 19
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 6296 bases
Position: chrLG14:4916850-4923145
Accession: 105029632
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000028107	SRP19	PF01922.17	3.6e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000014242	-	905	-	ENSELUP00000028107	141 (aa)	-	C1BW62

Gene Model

Click here to download ENSELUG00000004594's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000004594's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000004594	srp19	93	77.863	ENSELUG00000007958	srp19	94	78.195

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000004594	srp19	91	68.217	ENSG00000153037	SRP19	95	66.667	Homo_sapiens
ENSELUG00000004594	srp19	94	77.444	ENSAPOG00000002199	srp19	94	77.444	Acanthochromis_polyacanthus
ENSELUG00000004594	srp19	91	66.667	ENSAMEG00000012623	SRP19	88	66.667	Ailuropoda_melanoleuca
ENSELUG00000004594	srp19	94	73.684	ENSACIG00000005082	srp19	94	73.684	Amphilophus_citrinellus
ENSELUG00000004594	srp19	94	76.692	ENSAOCG00000002718	srp19	94	76.692	Amphiprion_ocellaris
ENSELUG00000004594	srp19	94	75.940	ENSAPEG00000022170	srp19	94	75.940	Amphiprion_percula
ENSELUG00000004594	srp19	94	77.444	ENSATEG00000012472	srp19	94	77.444	Anabas_testudineus
ENSELUG00000004594	srp19	79	66.372	ENSAPLG00000002624	SRP19	93	66.957	Anas_platyrhynchos
ENSELUG00000004594	srp19	90	65.625	ENSACAG00000007550	SRP19	89	66.154	Anolis_carolinensis
ENSELUG00000004594	srp19	90	53.125	ENSANAG00000030287	-	89	52.846	Aotus_nancymaae
ENSELUG00000004594	srp19	91	67.442	ENSANAG00000032576	-	90	67.442	Aotus_nancymaae
ENSELUG00000004594	srp19	79	58.036	ENSANAG00000029862	-	88	61.458	Aotus_nancymaae
ENSELUG00000004594	srp19	94	71.429	ENSACLG00000006259	srp19	94	71.429	Astatotilapia_calliptera
ENSELUG00000004594	srp19	93	77.099	ENSAMXG00000043011	srp19	94	77.444	Astyanax_mexicanus
ENSELUG00000004594	srp19	91	66.667	ENSBTAG00000012803	SRP19	90	66.667	Bos_taurus
ENSELUG00000004594	srp19	82	50.000	WBGene00018159	F37F2.2	88	49.606	Caenorhabditis_elegans
ENSELUG00000004594	srp19	89	69.291	ENSCJAG00000038676	-	85	68.085	Callithrix_jacchus
ENSELUG00000004594	srp19	86	52.459	ENSCJAG00000045531	-	80	52.381	Callithrix_jacchus
ENSELUG00000004594	srp19	91	68.217	ENSCAFG00000031549	SRP19	90	68.217	Canis_familiaris
ENSELUG00000004594	srp19	84	69.167	ENSCAFG00020022437	-	92	69.106	Canis_lupus_dingo
ENSELUG00000004594	srp19	91	68.217	ENSCAFG00020014267	-	90	68.217	Canis_lupus_dingo
ENSELUG00000004594	srp19	65	65.217	ENSCAFG00020004285	-	85	65.263	Canis_lupus_dingo
ENSELUG00000004594	srp19	91	66.667	ENSCHIG00000017551	SRP19	90	66.667	Capra_hircus
ENSELUG00000004594	srp19	91	67.442	ENSTSYG00000007875	SRP19	90	67.442	Carlito_syrichta
ENSELUG00000004594	srp19	73	61.538	ENSCPOG00000036806	SRP19	76	63.366	Cavia_porcellus
ENSELUG00000004594	srp19	87	53.226	ENSCCAG00000023426	-	80	53.226	Cebus_capucinus
ENSELUG00000004594	srp19	87	52.033	ENSCCAG00000029821	-	61	52.033	Cebus_capucinus
ENSELUG00000004594	srp19	91	67.442	ENSCCAG00000035651	-	90	67.442	Cebus_capucinus
ENSELUG00000004594	srp19	87	59.350	ENSCATG00000040513	-	78	58.268	Cercocebus_atys
ENSELUG00000004594	srp19	89	63.780	ENSCATG00000039250	-	89	62.791	Cercocebus_atys
ENSELUG00000004594	srp19	89	64.286	ENSCLAG00000016055	-	87	64.286	Chinchilla_lanigera
ENSELUG00000004594	srp19	89	69.048	ENSCLAG00000004791	-	90	67.442	Chinchilla_lanigera
ENSELUG00000004594	srp19	91	67.442	ENSCHOG00000013452	SRP19	90	67.442	Choloepus_hoffmanni
ENSELUG00000004594	srp19	93	65.152	ENSCPBG00000013903	SRP19	94	65.672	Chrysemys_picta_bellii
ENSELUG00000004594	srp19	91	65.891	ENSCGRG00001020510	Srp19	90	65.891	Cricetulus_griseus_chok1gshd
ENSELUG00000004594	srp19	84	61.345	ENSCGRG00000008542	-	91	61.345	Cricetulus_griseus_crigri
ENSELUG00000004594	srp19	67	63.000	ENSCGRG00000010716	-	88	63.000	Cricetulus_griseus_crigri
ENSELUG00000004594	srp19	94	78.195	ENSCSEG00000010039	srp19	94	78.195	Cynoglossus_semilaevis
ENSELUG00000004594	srp19	94	76.692	ENSCVAG00000017621	srp19	94	76.692	Cyprinodon_variegatus
ENSELUG00000004594	srp19	93	74.046	ENSDARG00000035699	srp19	94	74.436	Danio_rerio
ENSELUG00000004594	srp19	91	67.442	ENSDNOG00000013856	SRP19	90	67.442	Dasypus_novemcinctus
ENSELUG00000004594	srp19	67	66.667	ENSDORG00000004746	Srp19	76	66.667	Dipodomys_ordii
ENSELUG00000004594	srp19	84	51.261	FBgn0015298	Srp19	73	51.695	Drosophila_melanogaster
ENSELUG00000004594	srp19	89	69.291	ENSETEG00000017132	SRP19	90	68.217	Echinops_telfairi
ENSELUG00000004594	srp19	90	66.142	ENSEBUG00000006613	srp19	94	65.414	Eptatretus_burgeri
ENSELUG00000004594	srp19	91	66.667	ENSEASG00005015182	SRP19	90	66.667	Equus_asinus_asinus
ENSELUG00000004594	srp19	91	66.667	ENSEEUG00000007298	SRP19	90	66.667	Erinaceus_europaeus
ENSELUG00000004594	srp19	91	67.442	ENSFCAG00000025895	SRP19	90	67.442	Felis_catus
ENSELUG00000004594	srp19	91	65.891	ENSFDAG00000013543	SRP19	90	65.891	Fukomys_damarensis
ENSELUG00000004594	srp19	94	77.444	ENSFHEG00000000493	srp19	94	77.444	Fundulus_heteroclitus
ENSELUG00000004594	srp19	85	76.667	ENSGMOG00000003264	srp19	94	76.667	Gadus_morhua
ENSELUG00000004594	srp19	89	67.460	ENSGALG00000000218	SRP19	92	66.165	Gallus_gallus
ENSELUG00000004594	srp19	89	77.600	ENSGAFG00000015815	srp19	60	77.600	Gambusia_affinis
ENSELUG00000004594	srp19	94	75.188	ENSGACG00000001093	srp19	90	75.188	Gasterosteus_aculeatus
ENSELUG00000004594	srp19	93	65.152	ENSGAGG00000025305	SRP19	94	65.672	Gopherus_agassizii
ENSELUG00000004594	srp19	88	70.161	ENSHBUG00000006131	srp19	87	70.161	Haplochromis_burtoni
ENSELUG00000004594	srp19	89	66.929	ENSHGLG00000006075	SRP19	90	65.891	Heterocephalus_glaber_female
ENSELUG00000004594	srp19	89	66.929	ENSHGLG00100015859	SRP19	90	65.891	Heterocephalus_glaber_male
ENSELUG00000004594	srp19	94	74.436	ENSHCOG00000013231	srp19	94	74.436	Hippocampus_comes
ENSELUG00000004594	srp19	93	74.809	ENSIPUG00000025084	srp19	94	75.188	Ictalurus_punctatus
ENSELUG00000004594	srp19	91	68.217	ENSSTOG00000000348	SRP19	90	68.217	Ictidomys_tridecemlineatus
ENSELUG00000004594	srp19	89	67.717	ENSJJAG00000017185	Srp19	90	66.667	Jaculus_jaculus
ENSELUG00000004594	srp19	94	75.940	ENSKMAG00000011155	srp19	94	75.940	Kryptolebias_marmoratus
ENSELUG00000004594	srp19	94	77.444	ENSLBEG00000026727	srp19	94	77.444	Labrus_bergylta
ENSELUG00000004594	srp19	93	68.182	ENSLACG00000004459	SRP19	87	68.657	Latimeria_chalumnae
ENSELUG00000004594	srp19	93	75.573	ENSLOCG00000010302	srp19	94	75.940	Lepisosteus_oculatus
ENSELUG00000004594	srp19	91	65.891	ENSLAFG00000002564	SRP19	90	65.891	Loxodonta_africana
ENSELUG00000004594	srp19	84	52.101	ENSMFAG00000040055	-	90	52.066	Macaca_fascicularis
ENSELUG00000004594	srp19	84	64.706	ENSMFAG00000000554	-	93	61.832	Macaca_fascicularis
ENSELUG00000004594	srp19	84	65.546	ENSMMUG00000049186	-	93	62.595	Macaca_mulatta
ENSELUG00000004594	srp19	87	58.537	ENSMMUG00000032515	-	92	58.400	Macaca_mulatta
ENSELUG00000004594	srp19	91	68.217	ENSMNEG00000038714	SRP19	90	68.217	Macaca_nemestrina
ENSELUG00000004594	srp19	84	51.261	ENSMNEG00000040117	-	90	51.240	Macaca_nemestrina
ENSELUG00000004594	srp19	94	76.692	ENSMAMG00000018346	srp19	94	76.692	Mastacembelus_armatus
ENSELUG00000004594	srp19	94	71.429	ENSMZEG00005001765	srp19	94	71.429	Maylandia_zebra
ENSELUG00000004594	srp19	84	68.333	ENSMGAG00000006762	SRP19	93	68.852	Meleagris_gallopavo
ENSELUG00000004594	srp19	91	65.116	ENSMICG00000000399	SRP19	90	65.116	Microcebus_murinus
ENSELUG00000004594	srp19	65	61.290	ENSMICG00000049202	-	86	61.458	Microcebus_murinus
ENSELUG00000004594	srp19	67	66.667	ENSMOCG00000010532	-	88	66.667	Microtus_ochrogaster
ENSELUG00000004594	srp19	91	67.442	ENSMOCG00000006534	Srp19	90	67.442	Microtus_ochrogaster
ENSELUG00000004594	srp19	89	74.400	ENSMMOG00000010417	srp19	81	74.400	Mola_mola
ENSELUG00000004594	srp19	93	67.424	ENSMODG00000013278	SRP19	94	67.910	Monodelphis_domestica
ENSELUG00000004594	srp19	94	78.195	ENSMALG00000003858	srp19	94	78.195	Monopterus_albus
ENSELUG00000004594	srp19	89	69.291	MGP_CAROLIEiJ_G0022086	Srp19	90	68.217	Mus_caroli
ENSELUG00000004594	srp19	89	69.291	ENSMUSG00000014504	Srp19	90	68.217	Mus_musculus
ENSELUG00000004594	srp19	89	68.504	MGP_PahariEiJ_G0018820	Srp19	90	67.442	Mus_pahari
ENSELUG00000004594	srp19	89	69.291	MGP_SPRETEiJ_G0022998	Srp19	90	68.217	Mus_spretus
ENSELUG00000004594	srp19	91	67.442	ENSMPUG00000012695	SRP19	88	67.442	Mustela_putorius_furo
ENSELUG00000004594	srp19	86	64.754	ENSMLUG00000024549	-	91	64.286	Myotis_lucifugus
ENSELUG00000004594	srp19	89	66.929	ENSMLUG00000014793	-	90	65.891	Myotis_lucifugus
ENSELUG00000004594	srp19	88	61.600	ENSNGAG00000014524	-	96	61.600	Nannospalax_galili
ENSELUG00000004594	srp19	91	65.891	ENSNGAG00000003440	-	90	65.891	Nannospalax_galili
ENSELUG00000004594	srp19	89	60.317	ENSNLEG00000035364	-	88	61.458	Nomascus_leucogenys
ENSELUG00000004594	srp19	84	68.067	ENSMEUG00000012529	SRP19	93	68.595	Notamacropus_eugenii
ENSELUG00000004594	srp19	82	68.376	ENSOPRG00000010549	SRP19	93	69.421	Ochotona_princeps
ENSELUG00000004594	srp19	67	66.667	ENSODEG00000005538	-	84	66.667	Octodon_degus
ENSELUG00000004594	srp19	87	56.098	ENSODEG00000013862	-	87	56.349	Octodon_degus
ENSELUG00000004594	srp19	87	63.710	ENSODEG00000019119	-	90	62.791	Octodon_degus
ENSELUG00000004594	srp19	94	69.925	ENSONIG00000000542	srp19	94	69.925	Oreochromis_niloticus
ENSELUG00000004594	srp19	93	66.667	ENSOANG00000011139	SRP19	77	67.164	Ornithorhynchus_anatinus
ENSELUG00000004594	srp19	91	67.692	ENSOCUG00000015639	SRP19	90	67.692	Oryctolagus_cuniculus
ENSELUG00000004594	srp19	94	75.940	ENSORLG00000028267	srp19	95	75.940	Oryzias_latipes
ENSELUG00000004594	srp19	94	75.940	ENSORLG00020015201	srp19	95	75.940	Oryzias_latipes_hni
ENSELUG00000004594	srp19	94	75.940	ENSORLG00015007525	srp19	95	75.940	Oryzias_latipes_hsok
ENSELUG00000004594	srp19	94	75.188	ENSOMEG00000009178	srp19	95	75.188	Oryzias_melastigma
ENSELUG00000004594	srp19	89	67.717	ENSOGAG00000008579	SRP19	88	67.717	Otolemur_garnettii
ENSELUG00000004594	srp19	91	65.891	ENSOARG00000016066	SRP19	90	65.891	Ovis_aries
ENSELUG00000004594	srp19	91	68.217	ENSPPAG00000037062	SRP19	90	68.217	Pan_paniscus
ENSELUG00000004594	srp19	91	67.442	ENSPPRG00000015591	SRP19	90	67.442	Panthera_pardus
ENSELUG00000004594	srp19	91	67.442	ENSPTIG00000021474	SRP19	90	67.442	Panthera_tigris_altaica
ENSELUG00000004594	srp19	91	68.217	ENSPTRG00000017136	SRP19	90	68.217	Pan_troglodytes
ENSELUG00000004594	srp19	91	68.217	ENSPANG00000004370	-	90	68.217	Papio_anubis
ENSELUG00000004594	srp19	89	62.992	ENSPANG00000034740	-	88	62.992	Papio_anubis
ENSELUG00000004594	srp19	94	69.925	ENSPKIG00000018671	srp19	94	69.925	Paramormyrops_kingsleyae
ENSELUG00000004594	srp19	84	67.500	ENSPSIG00000013811	SRP19	93	68.033	Pelodiscus_sinensis
ENSELUG00000004594	srp19	94	77.444	ENSPMGG00000015313	srp19	94	77.444	Periophthalmus_magnuspinnatus
ENSELUG00000004594	srp19	85	69.421	ENSPEMG00000004412	-	88	69.421	Peromyscus_maniculatus_bairdii
ENSELUG00000004594	srp19	95	63.433	ENSPMAG00000002685	srp19	93	64.885	Petromyzon_marinus
ENSELUG00000004594	srp19	93	66.667	ENSPCIG00000010250	SRP19	93	67.164	Phascolarctos_cinereus
ENSELUG00000004594	srp19	94	77.444	ENSPFOG00000015887	srp19	94	77.444	Poecilia_formosa
ENSELUG00000004594	srp19	94	77.444	ENSPLAG00000007784	srp19	94	77.444	Poecilia_latipinna
ENSELUG00000004594	srp19	94	76.692	ENSPMEG00000003056	srp19	94	76.692	Poecilia_mexicana
ENSELUG00000004594	srp19	94	77.444	ENSPREG00000017307	srp19	94	77.444	Poecilia_reticulata
ENSELUG00000004594	srp19	91	68.217	ENSPPYG00000029584	SRP19	88	68.217	Pongo_abelii
ENSELUG00000004594	srp19	67	64.211	ENSPCAG00000000228	SRP19	66	64.211	Procavia_capensis
ENSELUG00000004594	srp19	91	66.667	ENSPCOG00000023239	SRP19	90	66.667	Propithecus_coquereli
ENSELUG00000004594	srp19	91	66.667	ENSPVAG00000004895	SRP19	90	66.667	Pteropus_vampyrus
ENSELUG00000004594	srp19	93	72.727	ENSPNAG00000009392	srp19	94	73.134	Pygocentrus_nattereri
ENSELUG00000004594	srp19	89	68.504	ENSRNOG00000020204	Srp19	90	67.442	Rattus_norvegicus
ENSELUG00000004594	srp19	52	66.667	ENSRBIG00000031651	-	83	66.667	Rhinopithecus_bieti
ENSELUG00000004594	srp19	89	63.200	ENSRBIG00000040440	-	90	62.791	Rhinopithecus_bieti
ENSELUG00000004594	srp19	91	68.217	ENSRBIG00000015627	-	90	68.217	Rhinopithecus_bieti
ENSELUG00000004594	srp19	89	63.200	ENSRROG00000037054	-	90	62.791	Rhinopithecus_roxellana
ENSELUG00000004594	srp19	87	54.032	ENSRROG00000037316	-	91	54.918	Rhinopithecus_roxellana
ENSELUG00000004594	srp19	91	67.442	ENSSBOG00000028071	-	90	67.442	Saimiri_boliviensis_boliviensis
ENSELUG00000004594	srp19	89	51.587	ENSSBOG00000032685	-	85	57.895	Saimiri_boliviensis_boliviensis
ENSELUG00000004594	srp19	94	75.188	ENSSFOG00015022139	srp19	94	75.188	Scleropages_formosus
ENSELUG00000004594	srp19	94	74.436	ENSSMAG00000016803	srp19	94	74.436	Scophthalmus_maximus
ENSELUG00000004594	srp19	94	65.972	ENSSDUG00000012930	srp19	94	65.972	Seriola_dumerili
ENSELUG00000004594	srp19	62	59.770	ENSSLDG00000021916	-	51	77.419	Seriola_lalandi_dorsalis
ENSELUG00000004594	srp19	89	67.717	ENSSARG00000000615	SRP19	90	66.667	Sorex_araneus
ENSELUG00000004594	srp19	87	70.732	ENSSPUG00000015769	SRP19	92	69.173	Sphenodon_punctatus
ENSELUG00000004594	srp19	91	66.667	ENSSSCG00000026230	SRP19	90	66.667	Sus_scrofa
ENSELUG00000004594	srp19	87	67.480	ENSTGUG00000001019	SRP19	88	67.969	Taeniopygia_guttata
ENSELUG00000004594	srp19	94	74.453	ENSTRUG00000023119	srp19	94	74.453	Takifugu_rubripes
ENSELUG00000004594	srp19	94	75.188	ENSTNIG00000018880	srp19	94	75.188	Tetraodon_nigroviridis
ENSELUG00000004594	srp19	91	65.891	ENSTTRG00000001690	SRP19	89	65.891	Tursiops_truncatus
ENSELUG00000004594	srp19	89	67.460	ENSUAMG00000000111	SRP19	90	67.442	Ursus_americanus
ENSELUG00000004594	srp19	91	67.442	ENSUMAG00000016997	SRP19	90	67.442	Ursus_maritimus
ENSELUG00000004594	srp19	91	66.667	ENSVPAG00000006001	SRP19	90	66.667	Vicugna_pacos
ENSELUG00000004594	srp19	67	66.667	ENSVVUG00000012423	SRP19	87	70.588	Vulpes_vulpes
ENSELUG00000004594	srp19	86	64.754	ENSXETG00000011993	srp19	86	64.754	Xenopus_tropicalis
ENSELUG00000004594	srp19	87	66.667	ENSXCOG00000012530	srp19	86	66.667	Xiphophorus_couchianus
ENSELUG00000004594	srp19	94	76.692	ENSXMAG00000029788	srp19	94	76.692	Xiphophorus_maculatus