EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000004607 (Gene tree)
Gene ID: 105011833
Gene Symbol: fip1l1a
Alias: si:dkey-161n17.1
Full Name: factor interacting with PAPOLA and CPSF1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 20201 bases
Position: chrLG08:21129597-21149797
Accession: 105011833
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000003307	Fip1	PF05182.13	6.5e-24	1	1
ENSELUP00000028125	Fip1	PF05182.13	9.5e-24	1	1
ENSELUP00000028122	Fip1	PF05182.13	9.8e-24	1	1
ENSELUP00000028139	Fip1	PF05182.13	9.8e-24	1	1
ENSELUP00000028144	Fip1	PF05182.13	1.1e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000014204	-	1814	XM_010872228	ENSELUP00000028122	515 (aa)	XP_010870530	-
ENSELUT00000014140	-	2038	XM_010872223	ENSELUP00000028139	515 (aa)	XP_010870525	-
ENSELUT00000014124	-	2155	-	ENSELUP00000028144	554 (aa)	-	-
ENSELUT00000014243	-	1143	-	ENSELUP00000003307	380 (aa)	-	-
ENSELUT00000014175	-	2011	XM_010872227	ENSELUP00000028125	506 (aa)	XP_010870529	-

Gene Model

Click here to download ENSELUG00000004607's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000004607's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000004607	fip1l1a	72	64.865	ENSELUG00000001280	fip1l1b	97	50.885

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000004607	fip1l1a	95	38.462	ENSACIG00000001454	fip1l1b	91	68.919	Amphilophus_citrinellus
ENSELUG00000004607	fip1l1a	73	56.303	ENSAOCG00000021043	fip1l1b	99	51.138	Amphiprion_ocellaris
ENSELUG00000004607	fip1l1a	99	49.655	ENSAPEG00000022229	fip1l1b	99	51.138	Amphiprion_percula
ENSELUG00000004607	fip1l1a	99	56.490	ENSATEG00000021757	fip1l1b	99	52.708	Anabas_testudineus
ENSELUG00000004607	fip1l1a	82	41.892	ENSAPLG00000003042	-	98	42.500	Anas_platyrhynchos
ENSELUG00000004607	fip1l1a	65	61.600	ENSACAG00000010556	-	74	56.164	Anolis_carolinensis
ENSELUG00000004607	fip1l1a	99	55.882	ENSACLG00000010418	fip1l1b	99	52.105	Astatotilapia_calliptera
ENSELUG00000004607	fip1l1a	68	57.983	ENSAMXG00000011126	fip1l1b	88	51.327	Astyanax_mexicanus
ENSELUG00000004607	fip1l1a	60	44.839	ENSAMXG00000031045	fip1l1a	83	46.595	Astyanax_mexicanus
ENSELUG00000004607	fip1l1a	83	46.804	ENSCAPG00000009569	-	76	56.566	Cavia_aperea
ENSELUG00000004607	fip1l1a	91	46.305	ENSCPBG00000025019	-	97	53.431	Chrysemys_picta_bellii
ENSELUG00000004607	fip1l1a	53	48.276	ENSCGRG00001018568	Fip1l1	99	46.507	Cricetulus_griseus_chok1gshd
ENSELUG00000004607	fip1l1a	53	48.276	ENSCGRG00000000208	Fip1l1	99	46.507	Cricetulus_griseus_crigri
ENSELUG00000004607	fip1l1a	99	53.860	ENSCSEG00000006583	fip1l1b	99	51.471	Cynoglossus_semilaevis
ENSELUG00000004607	fip1l1a	99	54.710	ENSCVAG00000023435	fip1l1b	99	51.964	Cyprinodon_variegatus
ENSELUG00000004607	fip1l1a	100	45.216	ENSDARG00000043328	fip1l1a	100	45.437	Danio_rerio
ENSELUG00000004607	fip1l1a	99	47.232	ENSDARG00000070431	fip1l1b	99	45.690	Danio_rerio
ENSELUG00000004607	fip1l1a	74	45.455	ENSEASG00005019566	-	96	47.692	Equus_asinus_asinus
ENSELUG00000004607	fip1l1a	51	45.210	ENSEEUG00000004965	-	58	46.687	Erinaceus_europaeus
ENSELUG00000004607	fip1l1a	99	55.635	ENSFHEG00000003843	fip1l1b	99	51.681	Fundulus_heteroclitus
ENSELUG00000004607	fip1l1a	66	36.137	ENSGMOG00000012065	-	56	40.796	Gadus_morhua
ENSELUG00000004607	fip1l1a	99	47.452	ENSGMOG00000004913	fip1l1b	99	44.034	Gadus_morhua
ENSELUG00000004607	fip1l1a	68	57.025	ENSGALG00000013943	-	99	49.634	Gallus_gallus
ENSELUG00000004607	fip1l1a	99	55.203	ENSGAFG00000008253	fip1l1b	99	51.159	Gambusia_affinis
ENSELUG00000004607	fip1l1a	92	46.802	ENSGACG00000015946	fip1l1b	99	45.826	Gasterosteus_aculeatus
ENSELUG00000004607	fip1l1a	91	46.305	ENSGAGG00000009763	-	99	48.496	Gopherus_agassizii
ENSELUG00000004607	fip1l1a	99	55.882	ENSHBUG00000013978	fip1l1b	99	52.105	Haplochromis_burtoni
ENSELUG00000004607	fip1l1a	99	53.748	ENSHCOG00000015834	fip1l1b	99	51.537	Hippocampus_comes
ENSELUG00000004607	fip1l1a	72	63.855	ENSIPUG00000022454	fip1l1b	99	46.995	Ictalurus_punctatus
ENSELUG00000004607	fip1l1a	99	53.102	ENSKMAG00000021938	fip1l1b	99	50.181	Kryptolebias_marmoratus
ENSELUG00000004607	fip1l1a	99	52.212	ENSLBEG00000028819	fip1l1b	99	51.872	Labrus_bergylta
ENSELUG00000004607	fip1l1a	95	50.289	ENSLACG00000011991	fip1l1a	95	51.048	Latimeria_chalumnae
ENSELUG00000004607	fip1l1a	99	50.174	ENSLOCG00000014127	fip1l1b	99	51.742	Lepisosteus_oculatus
ENSELUG00000004607	fip1l1a	53	53.390	ENSLOCG00000015223	-	95	38.188	Lepisosteus_oculatus
ENSELUG00000004607	fip1l1a	99	55.474	ENSMAMG00000004535	fip1l1b	99	53.165	Mastacembelus_armatus
ENSELUG00000004607	fip1l1a	99	55.882	ENSMZEG00005023828	fip1l1b	99	51.171	Maylandia_zebra
ENSELUG00000004607	fip1l1a	68	57.025	ENSMGAG00000011885	-	89	50.437	Meleagris_gallopavo
ENSELUG00000004607	fip1l1a	53	43.506	ENSMAUG00000010526	Fip1l1	99	45.343	Mesocricetus_auratus
ENSELUG00000004607	fip1l1a	53	47.931	ENSMOCG00000008020	Fip1l1	99	46.691	Microtus_ochrogaster
ENSELUG00000004607	fip1l1a	69	68.750	ENSMMOG00000008262	fip1l1b	85	46.556	Mola_mola
ENSELUG00000004607	fip1l1a	59	45.187	ENSMODG00000020654	-	89	45.228	Monodelphis_domestica
ENSELUG00000004607	fip1l1a	99	45.741	ENSMALG00000000838	fip1l1b	99	44.879	Monopterus_albus
ENSELUG00000004607	fip1l1a	99	53.915	ENSNBRG00000017832	fip1l1b	99	52.105	Neolamprologus_brichardi
ENSELUG00000004607	fip1l1a	99	53.381	ENSONIG00000008785	fip1l1b	99	49.212	Oreochromis_niloticus
ENSELUG00000004607	fip1l1a	84	41.667	ENSOANG00000003384	-	91	41.353	Ornithorhynchus_anatinus
ENSELUG00000004607	fip1l1a	99	54.128	ENSORLG00000004397	fip1l1b	99	53.165	Oryzias_latipes
ENSELUG00000004607	fip1l1a	99	53.945	ENSORLG00020008716	fip1l1b	99	52.338	Oryzias_latipes_hni
ENSELUG00000004607	fip1l1a	99	54.862	ENSORLG00015006736	fip1l1b	99	52.803	Oryzias_latipes_hsok
ENSELUG00000004607	fip1l1a	99	42.705	ENSOMEG00000015730	fip1l1b	99	39.748	Oryzias_melastigma
ENSELUG00000004607	fip1l1a	99	49.723	ENSPKIG00000003396	fip1l1b	99	51.017	Paramormyrops_kingsleyae
ENSELUG00000004607	fip1l1a	99	47.928	ENSPMGG00000017028	fip1l1b	50	60.504	Periophthalmus_magnuspinnatus
ENSELUG00000004607	fip1l1a	53	47.931	ENSPEMG00000002025	Fip1l1	99	46.507	Peromyscus_maniculatus_bairdii
ENSELUG00000004607	fip1l1a	99	51.423	ENSPFOG00000014745	fip1l1b	99	50.536	Poecilia_formosa
ENSELUG00000004607	fip1l1a	99	51.504	ENSPLAG00000010954	fip1l1b	99	50.802	Poecilia_latipinna
ENSELUG00000004607	fip1l1a	99	51.601	ENSPMEG00000019187	fip1l1b	99	50.714	Poecilia_mexicana
ENSELUG00000004607	fip1l1a	82	49.774	ENSPREG00000012535	fip1l1b	89	47.465	Poecilia_reticulata
ENSELUG00000004607	fip1l1a	55	49.536	ENSPNYG00000015976	fip1l1b	99	47.287	Pundamilia_nyererei
ENSELUG00000004607	fip1l1a	60	48.052	ENSPNAG00000009853	fip1l1a	83	48.921	Pygocentrus_nattereri
ENSELUG00000004607	fip1l1a	56	39.339	ENSPNAG00000007456	-	95	37.838	Pygocentrus_nattereri
ENSELUG00000004607	fip1l1a	57	48.171	ENSPNAG00000015341	fip1l1b	70	51.111	Pygocentrus_nattereri
ENSELUG00000004607	fip1l1a	69	43.458	ENSSHAG00000015789	-	86	46.139	Sarcophilus_harrisii
ENSELUG00000004607	fip1l1a	51	39.865	ENSSFOG00015010948	-	73	42.599	Scleropages_formosus
ENSELUG00000004607	fip1l1a	91	49.507	ENSSFOG00015017653	fip1l1b	98	47.904	Scleropages_formosus
ENSELUG00000004607	fip1l1a	99	52.555	ENSSMAG00000013444	fip1l1b	99	50.459	Scophthalmus_maximus
ENSELUG00000004607	fip1l1a	99	57.221	ENSSDUG00000004117	fip1l1b	99	53.488	Seriola_dumerili
ENSELUG00000004607	fip1l1a	99	54.880	ENSSLDG00000024099	fip1l1b	99	53.321	Seriola_lalandi_dorsalis
ENSELUG00000004607	fip1l1a	73	44.330	ENSSARG00000001973	-	73	43.878	Sorex_araneus
ENSELUG00000004607	fip1l1a	52	47.794	ENSSPUG00000017328	-	87	50.769	Sphenodon_punctatus
ENSELUG00000004607	fip1l1a	99	54.610	ENSSPAG00000017564	fip1l1b	99	51.670	Stegastes_partitus
ENSELUG00000004607	fip1l1a	71	55.833	ENSTGUG00000007834	-	90	50.545	Taeniopygia_guttata
ENSELUG00000004607	fip1l1a	73	56.198	ENSTRUG00000001545	fip1l1b	99	52.747	Takifugu_rubripes
ENSELUG00000004607	fip1l1a	91	56.216	ENSTNIG00000004104	fip1l1b	99	48.409	Tetraodon_nigroviridis
ENSELUG00000004607	fip1l1a	84	41.339	ENSUMAG00000002758	-	98	43.836	Ursus_maritimus
ENSELUG00000004607	fip1l1a	73	44.330	ENSVPAG00000011574	-	76	43.878	Vicugna_pacos
ENSELUG00000004607	fip1l1a	71	48.995	ENSXETG00000011679	fip1l1	91	46.886	Xenopus_tropicalis
ENSELUG00000004607	fip1l1a	99	46.442	ENSXCOG00000013656	fip1l1b	99	44.802	Xiphophorus_couchianus
ENSELUG00000004607	fip1l1a	99	55.080	ENSXMAG00000017620	fip1l1b	99	51.254	Xiphophorus_maculatus