EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000004652 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 5019 bases
Position: chrLG13:4581030-4586048
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000003438	RRM_1	PF00076.22	2.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000014034	-	411	-	ENSELUP00000003438	136 (aa)	-	-

Gene Model

Click here to download ENSELUG00000004652's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000004652's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000004652	-	59	35.616	ENSELUG00000023043	elavl3	62	35.616
ENSELUG00000004652	-	60	41.250	ENSELUG00000005615	-	53	41.250
ENSELUG00000004652	-	57	36.111	ENSELUG00000010026	ELAVL2	57	36.111
ENSELUG00000004652	-	65	94.382	ENSELUG00000004675	-	55	92.593
ENSELUG00000004652	-	56	45.833	ENSELUG00000014398	-	51	39.474
ENSELUG00000004652	-	64	30.435	ENSELUG00000024182	SRSF6	67	30.263
ENSELUG00000004652	-	59	36.986	ENSELUG00000008025	elavl4	57	36.986
ENSELUG00000004652	-	65	33.708	ENSELUG00000013506	SRSF6	61	31.579
ENSELUG00000004652	-	61	72.289	ENSELUG00000019617	-	64	62.963

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000004652	-	60	58.537	ENSG00000102317	RBM3	51	58.750	Homo_sapiens
ENSELUG00000004652	-	68	65.306	ENSG00000099622	CIRBP	94	83.333	Homo_sapiens
ENSELUG00000004652	-	71	57.143	ENSAMEG00000012653	RBM3	50	60.000	Ailuropoda_melanoleuca
ENSELUG00000004652	-	60	59.756	ENSACAG00000013718	-	53	60.000	Anolis_carolinensis
ENSELUG00000004652	-	59	66.250	ENSACAG00000023931	-	54	66.250	Anolis_carolinensis
ENSELUG00000004652	-	72	53.600	ENSANAG00000027805	-	75	46.667	Aotus_nancymaae
ENSELUG00000004652	-	71	56.122	ENSANAG00000028883	-	84	52.632	Aotus_nancymaae
ENSELUG00000004652	-	68	56.383	ENSBTAG00000025848	RBM3	80	52.778	Bos_taurus
ENSELUG00000004652	-	71	46.939	ENSCJAG00000047359	-	57	47.500	Callithrix_jacchus
ENSELUG00000004652	-	65	57.778	ENSCJAG00000047341	-	84	52.632	Callithrix_jacchus
ENSELUG00000004652	-	60	54.878	ENSCAFG00000016002	-	54	55.000	Canis_familiaris
ENSELUG00000004652	-	71	54.082	ENSCAFG00020017705	-	66	57.692	Canis_lupus_dingo
ENSELUG00000004652	-	61	55.422	ENSCAFG00020020106	-	72	55.263	Canis_lupus_dingo
ENSELUG00000004652	-	53	52.778	ENSCAFG00020021344	-	80	52.778	Canis_lupus_dingo
ENSELUG00000004652	-	74	53.922	ENSCHIG00000009007	RBM3	57	57.500	Capra_hircus
ENSELUG00000004652	-	60	59.756	ENSTSYG00000008670	-	80	55.556	Carlito_syrichta
ENSELUG00000004652	-	60	51.220	ENSTSYG00000035220	-	56	51.899	Carlito_syrichta
ENSELUG00000004652	-	67	57.143	ENSTSYG00000035938	-	56	57.500	Carlito_syrichta
ENSELUG00000004652	-	61	49.398	ENSTSYG00000034265	-	54	49.383	Carlito_syrichta
ENSELUG00000004652	-	65	48.889	ENSTSYG00000031540	-	57	48.750	Carlito_syrichta
ENSELUG00000004652	-	69	56.250	ENSCAPG00000005923	RBM3	50	58.750	Cavia_aperea
ENSELUG00000004652	-	69	57.292	ENSCPOG00000003553	RBM3	50	60.000	Cavia_porcellus
ENSELUG00000004652	-	71	56.122	ENSCCAG00000038019	-	84	52.632	Cebus_capucinus
ENSELUG00000004652	-	71	44.898	ENSCCAG00000035552	-	53	46.250	Cebus_capucinus
ENSELUG00000004652	-	60	58.537	ENSCATG00000029986	-	80	54.167	Cercocebus_atys
ENSELUG00000004652	-	60	58.537	ENSCATG00000038524	-	51	58.750	Cercocebus_atys
ENSELUG00000004652	-	69	57.292	ENSCLAG00000002908	RBM3	51	60.000	Chinchilla_lanigera
ENSELUG00000004652	-	60	58.537	ENSCSAG00000013242	RBM3	51	58.750	Chlorocebus_sabaeus
ENSELUG00000004652	-	60	56.098	ENSCHOG00000007642	RBM3	51	56.250	Choloepus_hoffmanni
ENSELUG00000004652	-	59	66.250	ENSCPBG00000021863	-	54	66.250	Chrysemys_picta_bellii
ENSELUG00000004652	-	59	57.500	ENSCPBG00000021859	RBM3	52	57.500	Chrysemys_picta_bellii
ENSELUG00000004652	-	60	58.537	ENSCANG00000037907	-	80	54.167	Colobus_angolensis_palliatus
ENSELUG00000004652	-	60	70.732	ENSCANG00000037000	CIRBP	50	71.250	Colobus_angolensis_palliatus
ENSELUG00000004652	-	73	47.000	ENSCANG00000031890	-	52	46.250	Colobus_angolensis_palliatus
ENSELUG00000004652	-	60	57.317	ENSCANG00000014668	-	51	57.500	Colobus_angolensis_palliatus
ENSELUG00000004652	-	71	57.143	ENSCGRG00001018909	Rbm3	51	60.000	Cricetulus_griseus_chok1gshd
ENSELUG00000004652	-	71	57.143	ENSCGRG00000014636	Rbm3	51	60.000	Cricetulus_griseus_crigri
ENSELUG00000004652	-	60	58.537	ENSDNOG00000032565	-	50	60.256	Dasypus_novemcinctus
ENSELUG00000004652	-	69	48.958	ENSDNOG00000033435	-	51	50.617	Dasypus_novemcinctus
ENSELUG00000004652	-	61	46.988	ENSDNOG00000040058	-	50	46.914	Dasypus_novemcinctus
ENSELUG00000004652	-	74	43.137	ENSDNOG00000043650	-	53	41.975	Dasypus_novemcinctus
ENSELUG00000004652	-	65	54.255	ENSDORG00000000182	Rbm3	60	53.191	Dipodomys_ordii
ENSELUG00000004652	-	72	38.776	ENSEASG00005023389	-	67	40.000	Equus_asinus_asinus
ENSELUG00000004652	-	71	47.170	ENSEASG00005008251	RBM3	58	47.727	Equus_asinus_asinus
ENSELUG00000004652	-	71	57.143	ENSECAG00000024257	RBM3	80	55.556	Equus_caballus
ENSELUG00000004652	-	56	40.789	ENSECAG00000002141	-	88	40.789	Equus_caballus
ENSELUG00000004652	-	50	54.412	ENSFCAG00000030938	-	74	54.412	Felis_catus
ENSELUG00000004652	-	73	46.154	ENSFCAG00000021952	-	90	48.750	Felis_catus
ENSELUG00000004652	-	68	57.447	ENSFCAG00000002245	RBM3	50	60.000	Felis_catus
ENSELUG00000004652	-	60	70.732	ENSFALG00000014000	CIRBP	53	71.250	Ficedula_albicollis
ENSELUG00000004652	-	69	57.292	ENSFDAG00000007909	RBM3	51	60.000	Fukomys_damarensis
ENSELUG00000004652	-	59	66.250	ENSGAGG00000016473	-	54	66.250	Gopherus_agassizii
ENSELUG00000004652	-	59	58.750	ENSGAGG00000016475	RBM3	52	58.750	Gopherus_agassizii
ENSELUG00000004652	-	65	50.000	ENSGGOG00000025080	-	64	50.000	Gorilla_gorilla
ENSELUG00000004652	-	60	58.537	ENSGGOG00000005864	RBM3	80	54.167	Gorilla_gorilla
ENSELUG00000004652	-	60	56.098	ENSHGLG00000010919	-	58	56.250	Heterocephalus_glaber_female
ENSELUG00000004652	-	69	52.083	ENSHGLG00000013635	-	51	55.000	Heterocephalus_glaber_female
ENSELUG00000004652	-	60	59.756	ENSHGLG00000006552	RBM3	51	60.000	Heterocephalus_glaber_female
ENSELUG00000004652	-	60	59.756	ENSHGLG00100017487	-	51	60.000	Heterocephalus_glaber_male
ENSELUG00000004652	-	60	56.098	ENSHGLG00100014556	-	58	56.250	Heterocephalus_glaber_male
ENSELUG00000004652	-	69	52.083	ENSHGLG00100015330	-	51	55.000	Heterocephalus_glaber_male
ENSELUG00000004652	-	71	57.143	ENSSTOG00000027493	-	51	60.000	Ictidomys_tridecemlineatus
ENSELUG00000004652	-	71	57.143	ENSJJAG00000012962	-	52	60.000	Jaculus_jaculus
ENSELUG00000004652	-	61	68.675	ENSLOCG00000000112	-	67	69.136	Lepisosteus_oculatus
ENSELUG00000004652	-	63	65.909	ENSLOCG00000005031	-	56	68.675	Lepisosteus_oculatus
ENSELUG00000004652	-	60	46.341	ENSLAFG00000029211	-	50	46.250	Loxodonta_africana
ENSELUG00000004652	-	65	58.889	ENSLAFG00000007003	-	52	60.000	Loxodonta_africana
ENSELUG00000004652	-	60	70.732	ENSMFAG00000034048	CIRBP	50	71.250	Macaca_fascicularis
ENSELUG00000004652	-	62	57.143	ENSMFAG00000003836	-	59	58.750	Macaca_fascicularis
ENSELUG00000004652	-	62	57.143	ENSMFAG00000003694	RBM3	80	54.167	Macaca_fascicularis
ENSELUG00000004652	-	60	58.537	ENSMMUG00000037648	-	51	58.750	Macaca_mulatta
ENSELUG00000004652	-	60	70.732	ENSMMUG00000022101	CIRBP	94	83.333	Macaca_mulatta
ENSELUG00000004652	-	53	54.167	ENSMMUG00000018349	-	80	54.167	Macaca_mulatta
ENSELUG00000004652	-	62	57.143	ENSMNEG00000042115	-	80	54.167	Macaca_nemestrina
ENSELUG00000004652	-	60	58.537	ENSMNEG00000000984	-	51	58.750	Macaca_nemestrina
ENSELUG00000004652	-	65	58.242	ENSMLEG00000027951	-	51	57.500	Mandrillus_leucophaeus
ENSELUG00000004652	-	60	58.537	ENSMLEG00000041745	-	80	54.167	Mandrillus_leucophaeus
ENSELUG00000004652	-	71	57.143	ENSMAUG00000016488	-	51	60.000	Mesocricetus_auratus
ENSELUG00000004652	-	60	56.098	ENSMAUG00000008646	-	60	56.250	Mesocricetus_auratus
ENSELUG00000004652	-	60	59.756	ENSMICG00000047440	-	51	60.000	Microcebus_murinus
ENSELUG00000004652	-	69	57.292	ENSMICG00000028982	-	83	58.750	Microcebus_murinus
ENSELUG00000004652	-	71	57.143	ENSMOCG00000001511	Rbm3	51	60.000	Microtus_ochrogaster
ENSELUG00000004652	-	60	69.512	MGP_CAROLIEiJ_G0015568	Cirbp	74	70.000	Mus_caroli
ENSELUG00000004652	-	62	58.333	MGP_CAROLIEiJ_G0032914	-	80	55.556	Mus_caroli
ENSELUG00000004652	-	60	59.756	ENSMUSG00000031167	Rbm3	80	55.556	Mus_musculus
ENSELUG00000004652	-	60	69.512	ENSMUSG00000045193	Cirbp	74	70.000	Mus_musculus
ENSELUG00000004652	-	61	68.675	MGP_PahariEiJ_G0030981	Cirbp	74	70.000	Mus_pahari
ENSELUG00000004652	-	60	59.756	MGP_PahariEiJ_G0031463	Rbm3	80	55.556	Mus_pahari
ENSELUG00000004652	-	60	59.756	MGP_SPRETEiJ_G0034063	Rbm3	80	55.556	Mus_spretus
ENSELUG00000004652	-	60	69.512	MGP_SPRETEiJ_G0016386	Cirbp	74	70.000	Mus_spretus
ENSELUG00000004652	-	71	57.143	ENSMPUG00000013632	RBM3	51	60.000	Mustela_putorius_furo
ENSELUG00000004652	-	60	59.756	ENSMLUG00000003996	RBM3	50	60.000	Myotis_lucifugus
ENSELUG00000004652	-	71	57.143	ENSNGAG00000012951	Rbm3	52	60.000	Nannospalax_galili
ENSELUG00000004652	-	68	52.174	ENSNLEG00000031601	-	53	53.846	Nomascus_leucogenys
ENSELUG00000004652	-	60	70.732	ENSNLEG00000028393	-	56	71.250	Nomascus_leucogenys
ENSELUG00000004652	-	60	56.098	ENSNLEG00000019350	-	51	56.250	Nomascus_leucogenys
ENSELUG00000004652	-	60	58.537	ENSNLEG00000028027	-	80	54.167	Nomascus_leucogenys
ENSELUG00000004652	-	72	53.000	ENSODEG00000019976	-	51	56.250	Octodon_degus
ENSELUG00000004652	-	60	56.098	ENSODEG00000019234	-	51	56.250	Octodon_degus
ENSELUG00000004652	-	65	57.143	ENSODEG00000019283	-	51	57.500	Octodon_degus
ENSELUG00000004652	-	65	59.341	ENSODEG00000020479	-	51	60.000	Octodon_degus
ENSELUG00000004652	-	60	64.634	ENSODEG00000000843	-	54	65.000	Octodon_degus
ENSELUG00000004652	-	71	40.404	ENSOCUG00000027309	-	53	41.250	Oryctolagus_cuniculus
ENSELUG00000004652	-	65	58.889	ENSOGAG00000026654	RBM3	51	60.000	Otolemur_garnettii
ENSELUG00000004652	-	60	58.537	ENSPPAG00000034179	RBM3	80	54.167	Pan_paniscus
ENSELUG00000004652	-	68	48.913	ENSPPAG00000036405	-	67	50.000	Pan_paniscus
ENSELUG00000004652	-	53	51.389	ENSPPRG00000013361	-	80	51.389	Panthera_pardus
ENSELUG00000004652	-	65	58.889	ENSPPRG00000013315	RBM3	50	60.000	Panthera_pardus
ENSELUG00000004652	-	63	44.565	ENSPPRG00000011438	-	66	48.052	Panthera_pardus
ENSELUG00000004652	-	65	58.889	ENSPTIG00000017702	RBM3	50	60.000	Panthera_tigris_altaica
ENSELUG00000004652	-	60	58.537	ENSPTRG00000021864	RBM3	80	54.167	Pan_troglodytes
ENSELUG00000004652	-	68	48.913	ENSPTRG00000044048	-	67	50.000	Pan_troglodytes
ENSELUG00000004652	-	60	58.537	ENSPANG00000034727	-	80	54.167	Papio_anubis
ENSELUG00000004652	-	68	51.961	ENSPANG00000010520	-	68	49.020	Papio_anubis
ENSELUG00000004652	-	62	57.143	ENSPANG00000005561	-	56	58.750	Papio_anubis
ENSELUG00000004652	-	61	77.108	ENSPKIG00000024430	CIRBP	93	59.016	Paramormyrops_kingsleyae
ENSELUG00000004652	-	59	57.500	ENSPSIG00000007145	RBM3	50	57.500	Pelodiscus_sinensis
ENSELUG00000004652	-	71	57.143	ENSPEMG00000012411	Rbm3	51	60.000	Peromyscus_maniculatus_bairdii
ENSELUG00000004652	-	63	47.674	ENSPPYG00000000510	-	81	48.750	Pongo_abelii
ENSELUG00000004652	-	60	58.537	ENSPPYG00000020314	RBM3	80	54.167	Pongo_abelii
ENSELUG00000004652	-	60	58.025	ENSPCOG00000017170	-	87	58.667	Propithecus_coquereli
ENSELUG00000004652	-	60	60.976	ENSPCOG00000014346	-	51	61.250	Propithecus_coquereli
ENSELUG00000004652	-	60	56.098	ENSPCOG00000013194	-	69	56.164	Propithecus_coquereli
ENSELUG00000004652	-	71	57.143	ENSPVAG00000015630	RBM3	51	60.000	Pteropus_vampyrus
ENSELUG00000004652	-	71	57.143	ENSRNOG00000005387	Rbm3	51	60.000	Rattus_norvegicus
ENSELUG00000004652	-	60	70.732	ENSRBIG00000031290	CIRBP	50	71.250	Rhinopithecus_bieti
ENSELUG00000004652	-	60	58.537	ENSRBIG00000040498	RBM3	80	54.167	Rhinopithecus_bieti
ENSELUG00000004652	-	62	48.810	ENSRROG00000035651	-	50	47.500	Rhinopithecus_roxellana
ENSELUG00000004652	-	60	58.537	ENSRROG00000034767	RBM3	80	54.167	Rhinopithecus_roxellana
ENSELUG00000004652	-	60	70.732	ENSRROG00000022862	CIRBP	50	71.250	Rhinopithecus_roxellana
ENSELUG00000004652	-	55	56.000	ENSSBOG00000020829	-	89	56.000	Saimiri_boliviensis_boliviensis
ENSELUG00000004652	-	74	51.429	ENSSBOG00000035691	-	71	55.556	Saimiri_boliviensis_boliviensis
ENSELUG00000004652	-	71	56.122	ENSSBOG00000005354	-	58	58.750	Saimiri_boliviensis_boliviensis
ENSELUG00000004652	-	60	57.317	ENSSPUG00000000444	RBM3	54	57.500	Sphenodon_punctatus
ENSELUG00000004652	-	50	66.176	ENSSPUG00000000450	-	84	66.176	Sphenodon_punctatus
ENSELUG00000004652	-	60	58.537	ENSSSCG00000021591	-	80	54.167	Sus_scrofa
ENSELUG00000004652	-	71	48.958	ENSSSCG00000005430	-	50	54.667	Sus_scrofa
ENSELUG00000004652	-	65	49.451	ENSSSCG00000030003	-	51	50.000	Sus_scrofa
ENSELUG00000004652	-	75	56.863	ENSSSCG00000013427	CIRBP	51	72.059	Sus_scrofa
ENSELUG00000004652	-	71	56.122	ENSTTRG00000008587	RBM3	51	58.750	Tursiops_truncatus
ENSELUG00000004652	-	71	57.143	ENSUAMG00000013289	RBM3	51	60.000	Ursus_americanus
ENSELUG00000004652	-	71	57.143	ENSUMAG00000007785	RBM3	51	60.000	Ursus_maritimus
ENSELUG00000004652	-	59	57.500	ENSVVUG00000006737	-	92	57.500	Vulpes_vulpes
ENSELUG00000004652	-	71	57.143	ENSVVUG00000017670	RBM3	80	55.556	Vulpes_vulpes