EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000004822 (Gene tree)
Gene ID: 105015223
Gene Symbol: npm2b
Alias: npm2|zgc:163013
Full Name: nucleoplasmin ATPase
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 3825 bases
Position: chrLG14:21607418-21611242
Accession: 105015223
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000003632	Nucleoplasmin	PF03066.15	2.3e-31	1	1
ENSELUP00000028309	Nucleoplasmin	PF03066.15	3.2e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000013717	-	1979	-	ENSELUP00000003632	171 (aa)	-	-
ENSELUT00000013729	-	1083	XM_010878202	ENSELUP00000028309	193 (aa)	XP_010876504	UPI000578128C

Gene Model

Click here to download ENSELUG00000004822's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000004822's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000004822	npm2b	61	44.860	ENSELUG00000021730	npm3	66	44.860
ENSELUG00000004822	npm2b	65	42.857	ENSELUG00000017306	-	86	42.857
ENSELUG00000004822	npm2b	80	40.000	ENSELUG00000022123	npm1b	63	42.991

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000004822	npm2b	62	40.541	ENSG00000158806	NPM2	92	37.363	Homo_sapiens
ENSELUG00000004822	npm2b	88	45.455	ENSACAG00000000163	-	54	46.729	Anolis_carolinensis
ENSELUG00000004822	npm2b	62	41.441	ENSANAG00000038138	-	80	42.202	Aotus_nancymaae
ENSELUG00000004822	npm2b	60	41.748	ENSAMXG00000001084	npm2a	68	43.000	Astyanax_mexicanus
ENSELUG00000004822	npm2b	98	63.351	ENSAMXG00000038475	npm2b	92	65.241	Astyanax_mexicanus
ENSELUG00000004822	npm2b	58	47.115	ENSBTAG00000046918	NPM2	54	46.667	Bos_taurus
ENSELUG00000004822	npm2b	98	37.634	ENSCJAG00000020389	NPM2	79	42.593	Callithrix_jacchus
ENSELUG00000004822	npm2b	94	36.905	ENSCAFG00020015318	-	50	37.143	Canis_lupus_dingo
ENSELUG00000004822	npm2b	98	38.636	ENSCAFG00020007666	-	52	40.351	Canis_lupus_dingo
ENSELUG00000004822	npm2b	92	40.000	ENSCAFG00020015194	-	53	40.741	Canis_lupus_dingo
ENSELUG00000004822	npm2b	61	40.741	ENSCAFG00020015227	-	51	40.741	Canis_lupus_dingo
ENSELUG00000004822	npm2b	77	39.375	ENSCHIG00000026056	NPM2	53	45.714	Capra_hircus
ENSELUG00000004822	npm2b	58	45.098	ENSTSYG00000026275	NPM2	76	44.660	Carlito_syrichta
ENSELUG00000004822	npm2b	56	39.175	ENSCAPG00000006057	NPM2	52	38.776	Cavia_aperea
ENSELUG00000004822	npm2b	56	39.175	ENSCPOG00000039799	NPM2	52	38.776	Cavia_porcellus
ENSELUG00000004822	npm2b	77	42.759	ENSCCAG00000035076	NPM2	80	42.202	Cebus_capucinus
ENSELUG00000004822	npm2b	61	42.202	ENSCATG00000031833	NPM2	80	42.202	Cercocebus_atys
ENSELUG00000004822	npm2b	56	40.404	ENSCLAG00000013600	NPM2	52	40.000	Chinchilla_lanigera
ENSELUG00000004822	npm2b	62	40.541	ENSCSAG00000016588	NPM2	58	40.909	Chlorocebus_sabaeus
ENSELUG00000004822	npm2b	61	42.202	ENSCANG00000040109	NPM2	80	42.202	Colobus_angolensis_palliatus
ENSELUG00000004822	npm2b	100	63.006	ENSDARG00000053963	npm2b	93	62.295	Danio_rerio
ENSELUG00000004822	npm2b	58	39.000	ENSDARG00000076391	npm2a	63	39.000	Danio_rerio
ENSELUG00000004822	npm2b	57	47.525	ENSEASG00005018856	NPM2	53	47.059	Equus_asinus_asinus
ENSELUG00000004822	npm2b	56	40.000	ENSFDAG00000007971	NPM2	53	39.604	Fukomys_damarensis
ENSELUG00000004822	npm2b	74	40.625	ENSGALG00000054664	-	74	41.964	Gallus_gallus
ENSELUG00000004822	npm2b	90	47.742	ENSGALG00000050870	NPM2	56	48.649	Gallus_gallus
ENSELUG00000004822	npm2b	62	40.541	ENSGGOG00000007071	NPM2	80	41.284	Gorilla_gorilla
ENSELUG00000004822	npm2b	68	37.190	ENSHGLG00000006243	NPM2	57	36.364	Heterocephalus_glaber_female
ENSELUG00000004822	npm2b	75	37.748	ENSHGLG00100005664	NPM2	61	36.842	Heterocephalus_glaber_male
ENSELUG00000004822	npm2b	61	42.308	ENSIPUG00000010101	npm2a	64	44.000	Ictalurus_punctatus
ENSELUG00000004822	npm2b	100	61.404	ENSIPUG00000013175	npm2b	99	62.088	Ictalurus_punctatus
ENSELUG00000004822	npm2b	60	36.449	ENSSTOG00000013623	NPM2	50	37.963	Ictidomys_tridecemlineatus
ENSELUG00000004822	npm2b	85	39.355	ENSJJAG00000018214	Npm2	52	41.284	Jaculus_jaculus
ENSELUG00000004822	npm2b	67	50.000	ENSLACG00000016196	NPM2	68	50.420	Latimeria_chalumnae
ENSELUG00000004822	npm2b	97	60.526	ENSLOCG00000014878	npm2b	89	58.289	Lepisosteus_oculatus
ENSELUG00000004822	npm2b	84	37.888	ENSLAFG00000015584	NPM2	52	40.179	Loxodonta_africana
ENSELUG00000004822	npm2b	61	42.202	ENSMFAG00000032098	NPM2	80	42.202	Macaca_fascicularis
ENSELUG00000004822	npm2b	61	42.202	ENSMMUG00000002034	NPM2	80	42.202	Macaca_mulatta
ENSELUG00000004822	npm2b	61	42.202	ENSMNEG00000010994	NPM2	80	42.202	Macaca_nemestrina
ENSELUG00000004822	npm2b	61	42.202	ENSMLEG00000030071	NPM2	80	42.202	Mandrillus_leucophaeus
ENSELUG00000004822	npm2b	60	42.593	ENSMICG00000030722	-	80	42.202	Microcebus_murinus
ENSELUG00000004822	npm2b	59	43.269	ENSMOCG00000017251	Npm2	56	42.857	Microtus_ochrogaster
ENSELUG00000004822	npm2b	60	42.202	ENSMODG00000009677	-	56	42.478	Monodelphis_domestica
ENSELUG00000004822	npm2b	56	46.392	ENSMUSG00000047911	Npm2	57	46.392	Mus_musculus
ENSELUG00000004822	npm2b	58	42.718	ENSMLUG00000016075	NPM2	50	42.308	Myotis_lucifugus
ENSELUG00000004822	npm2b	84	39.103	ENSNGAG00000022056	Npm2	58	40.650	Nannospalax_galili
ENSELUG00000004822	npm2b	62	39.640	ENSNLEG00000035765	NPM2	80	40.367	Nomascus_leucogenys
ENSELUG00000004822	npm2b	64	46.154	ENSOANG00000020262	-	52	45.763	Ornithorhynchus_anatinus
ENSELUG00000004822	npm2b	78	37.500	ENSOCUG00000021756	NPM2	72	37.748	Oryctolagus_cuniculus
ENSELUG00000004822	npm2b	62	40.541	ENSPPAG00000040749	NPM2	80	41.284	Pan_paniscus
ENSELUG00000004822	npm2b	60	42.056	ENSPPRG00000022157	NPM2	80	41.284	Panthera_pardus
ENSELUG00000004822	npm2b	57	41.584	ENSPTIG00000011553	NPM2	82	42.000	Panthera_tigris_altaica
ENSELUG00000004822	npm2b	62	40.541	ENSPTRG00000020045	NPM2	80	41.284	Pan_troglodytes
ENSELUG00000004822	npm2b	61	42.202	ENSPANG00000031080	NPM2	80	42.202	Papio_anubis
ENSELUG00000004822	npm2b	97	65.625	ENSPKIG00000009700	npm2b	89	63.587	Paramormyrops_kingsleyae
ENSELUG00000004822	npm2b	66	39.823	ENSPKIG00000007241	npm2a	69	42.157	Paramormyrops_kingsleyae
ENSELUG00000004822	npm2b	98	44.330	ENSPSIG00000007722	NPM2	55	50.000	Pelodiscus_sinensis
ENSELUG00000004822	npm2b	70	39.837	ENSPCIG00000012716	-	53	41.593	Phascolarctos_cinereus
ENSELUG00000004822	npm2b	60	43.519	ENSPCOG00000018483	-	80	43.119	Propithecus_coquereli
ENSELUG00000004822	npm2b	100	63.584	ENSPNAG00000001303	npm2b	92	63.243	Pygocentrus_nattereri
ENSELUG00000004822	npm2b	58	42.000	ENSPNAG00000018186	npm2a	67	42.000	Pygocentrus_nattereri
ENSELUG00000004822	npm2b	61	42.202	ENSRBIG00000029235	NPM2	80	42.202	Rhinopithecus_bieti
ENSELUG00000004822	npm2b	61	42.202	ENSRROG00000044119	NPM2	80	42.202	Rhinopithecus_roxellana
ENSELUG00000004822	npm2b	84	42.683	ENSSBOG00000025301	NPM2	80	43.119	Saimiri_boliviensis_boliviensis
ENSELUG00000004822	npm2b	98	57.143	ENSSFOG00015010466	npm2b	91	58.824	Scleropages_formosus
ENSELUG00000004822	npm2b	81	43.357	ENSSPUG00000011509	NPM2	68	46.465	Sphenodon_punctatus
ENSELUG00000004822	npm2b	58	42.308	ENSSSCG00000009610	NPM2	57	41.905	Sus_scrofa
ENSELUG00000004822	npm2b	98	47.396	ENSXETG00000010542	npm2	72	53.472	Xenopus_tropicalis
ENSELUG00000004822	npm2b	68	40.678	ENSXETG00000016499	-	79	42.718	Xenopus_tropicalis