EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000004826 (Gene tree)
Gene ID: 105016237
Gene Symbol: -
Alias: -
Full Name: poly
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 19383 bases
Position: chrLG16:11726707-11746089
Accession: 105016237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000003607	PARP	PF00644.20	3.7e-22	1	1
ENSELUP00000003627	PARP	PF00644.20	3.7e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000013712	-	11025	XM_010879929	ENSELUP00000003627	2069 (aa)	XP_010878231	UPI000661DC36
ENSELUT00000013747	-	6135	-	ENSELUP00000003607	2044 (aa)	-	-

Gene Model

Click here to download ENSELUG00000004826's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000004826's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000004826	-	99	31.643	ENSELUG00000009798	si:ch211-219a4.3	98	33.418
ENSELUG00000004826	-	90	30.718	ENSELUG00000013643	-	99	31.868

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000004826	-	58	32.117	ENSAMXG00000010091	-	99	32.117	Astyanax_mexicanus
ENSELUG00000004826	-	82	49.111	ENSAMXG00000010209	-	99	49.283	Astyanax_mexicanus
ENSELUG00000004826	-	50	31.536	ENSCVAG00000009352	-	85	48.305	Cyprinodon_variegatus
ENSELUG00000004826	-	89	31.688	ENSDARG00000112454	FO744833.2	98	30.446	Danio_rerio
ENSELUG00000004826	-	81	31.783	ENSIPUG00000019762	-	95	31.783	Ictalurus_punctatus
ENSELUG00000004826	-	94	30.667	ENSIPUG00000019562	-	95	39.091	Ictalurus_punctatus
ENSELUG00000004826	-	88	30.651	ENSLBEG00000026419	-	82	32.027	Labrus_bergylta
ENSELUG00000004826	-	62	43.000	ENSMZEG00005027856	-	71	43.000	Maylandia_zebra
ENSELUG00000004826	-	65	40.909	ENSMMOG00000010419	-	92	50.420	Mola_mola
ENSELUG00000004826	-	96	36.508	ENSORLG00000017404	-	87	50.000	Oryzias_latipes
ENSELUG00000004826	-	68	34.862	ENSORLG00015004157	-	99	32.836	Oryzias_latipes_hsok
ENSELUG00000004826	-	81	36.567	ENSORLG00015004253	-	95	36.567	Oryzias_latipes_hsok
ENSELUG00000004826	-	65	40.645	ENSOMEG00000009483	-	76	40.645	Oryzias_melastigma
ENSELUG00000004826	-	96	46.513	ENSPKIG00000004064	-	96	69.492	Paramormyrops_kingsleyae
ENSELUG00000004826	-	65	39.869	ENSPREG00000017145	-	90	46.610	Poecilia_reticulata
ENSELUG00000004826	-	95	54.018	ENSPNAG00000005968	-	96	57.333	Pygocentrus_nattereri
ENSELUG00000004826	-	63	53.713	ENSPNAG00000028914	-	90	53.713	Pygocentrus_nattereri
ENSELUG00000004826	-	99	47.684	ENSSFOG00015019732	-	98	47.615	Scleropages_formosus
ENSELUG00000004826	-	90	30.827	ENSSMAG00000016922	-	81	50.000	Scophthalmus_maximus
ENSELUG00000004826	-	54	32.749	ENSSDUG00000013560	-	93	32.749	Seriola_dumerili
ENSELUG00000004826	-	65	36.810	ENSSPAG00000014708	-	94	46.957	Stegastes_partitus
ENSELUG00000004826	-	65	39.869	ENSXCOG00000012535	-	99	33.451	Xiphophorus_couchianus