EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000004898 (Gene tree)
Gene ID: 105026680
Gene Symbol: mtrex
Alias: julie|mtrex|skiv2l2|wu:fd11a05|zgc:63838
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 33623 bases
Position: chrLG14:3551753-3585375
Accession: 105026680
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000003642	rRNA_proc-arch	PF13234.6	1.1e-87	1	1
ENSELUP00000003664	rRNA_proc-arch	PF13234.6	1.1e-87	1	1
ENSELUP00000028330	rRNA_proc-arch	PF13234.6	1.2e-87	1	1
ENSELUP00000028330	DEAD	PF00270.29	2.6e-17	1	1
ENSELUP00000003642	DEAD	PF00270.29	4.7e-17	1	1
ENSELUP00000003664	DEAD	PF00270.29	4.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000013657	-	3198	-	ENSELUP00000028330	1065 (aa)	-	-
ENSELUT00000013685	-	3634	-	ENSELUP00000003642	952 (aa)	-	-
ENSELUT00000013647	-	2925	XM_010898283	ENSELUP00000003664	974 (aa)	XP_010896585	-

Gene Model

Click here to download ENSELUG00000004898's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000004898's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000004898	mtrex	97	36.164	ENSELUG00000000181	skiv2l	87	34.509

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000004898	mtrex	100	89.496	ENSG00000039123	MTREX	98	85.063	Homo_sapiens
ENSELUG00000004898	mtrex	100	91.396	ENSAPOG00000007814	mtrex	98	87.012	Acanthochromis_polyacanthus
ENSELUG00000004898	mtrex	100	89.402	ENSAMEG00000013856	MTREX	98	84.884	Ailuropoda_melanoleuca
ENSELUG00000004898	mtrex	100	90.756	ENSACIG00000015117	mtrex	100	86.760	Amphilophus_citrinellus
ENSELUG00000004898	mtrex	100	91.605	ENSAOCG00000011884	mtrex	98	87.280	Amphiprion_ocellaris
ENSELUG00000004898	mtrex	100	91.501	ENSAPEG00000019384	mtrex	98	87.207	Amphiprion_percula
ENSELUG00000004898	mtrex	100	91.492	ENSATEG00000015117	mtrex	98	87.855	Anabas_testudineus
ENSELUG00000004898	mtrex	100	88.761	ENSAPLG00000009694	MTREX	98	86.018	Anas_platyrhynchos
ENSELUG00000004898	mtrex	100	90.126	ENSACAG00000015200	MTREX	95	84.986	Anolis_carolinensis
ENSELUG00000004898	mtrex	100	89.601	ENSANAG00000023095	MTREX	99	84.787	Aotus_nancymaae
ENSELUG00000004898	mtrex	100	91.501	ENSACLG00000001921	mtrex	99	87.707	Astatotilapia_calliptera
ENSELUG00000004898	mtrex	97	90.683	ENSAMXG00000018751	mtrex	99	89.564	Astyanax_mexicanus
ENSELUG00000004898	mtrex	100	89.496	ENSBTAG00000010518	MTREX	98	84.690	Bos_taurus
ENSELUG00000004898	mtrex	99	54.017	WBGene00012342	mtr-4	91	53.700	Caenorhabditis_elegans
ENSELUG00000004898	mtrex	100	89.601	ENSCJAG00000001773	MTREX	99	83.889	Callithrix_jacchus
ENSELUG00000004898	mtrex	100	89.496	ENSCAFG00000006818	MTREX	98	85.354	Canis_familiaris
ENSELUG00000004898	mtrex	100	89.496	ENSCAFG00020024352	MTREX	98	85.354	Canis_lupus_dingo
ENSELUG00000004898	mtrex	100	89.391	ENSCHIG00000024413	MTREX	98	84.869	Capra_hircus
ENSELUG00000004898	mtrex	92	91.641	ENSTSYG00000007389	MTREX	98	85.952	Carlito_syrichta
ENSELUG00000004898	mtrex	90	79.080	ENSCAPG00000008696	MTREX	94	78.282	Cavia_aperea
ENSELUG00000004898	mtrex	100	89.601	ENSCPOG00000009797	MTREX	98	84.966	Cavia_porcellus
ENSELUG00000004898	mtrex	100	89.601	ENSCCAG00000014177	MTREX	98	84.869	Cebus_capucinus
ENSELUG00000004898	mtrex	100	89.496	ENSCATG00000042153	MTREX	98	85.160	Cercocebus_atys
ENSELUG00000004898	mtrex	100	89.601	ENSCLAG00000006622	MTREX	98	84.966	Chinchilla_lanigera
ENSELUG00000004898	mtrex	100	85.445	ENSCSAG00000016445	MTREX	98	81.335	Chlorocebus_sabaeus
ENSELUG00000004898	mtrex	67	97.222	ENSCHOG00000010936	-	65	97.222	Choloepus_hoffmanni
ENSELUG00000004898	mtrex	100	90.231	ENSCPBG00000026551	MTREX	92	86.634	Chrysemys_picta_bellii
ENSELUG00000004898	mtrex	100	70.742	ENSCING00000003239	-	99	66.732	Ciona_intestinalis
ENSELUG00000004898	mtrex	100	69.697	ENSCSAVG00000009304	-	100	70.494	Ciona_savignyi
ENSELUG00000004898	mtrex	100	89.496	ENSCANG00000035770	MTREX	98	84.675	Colobus_angolensis_palliatus
ENSELUG00000004898	mtrex	100	89.496	ENSCGRG00001024680	Mtrex	98	84.951	Cricetulus_griseus_chok1gshd
ENSELUG00000004898	mtrex	100	89.496	ENSCGRG00000000307	Mtrex	98	84.951	Cricetulus_griseus_crigri
ENSELUG00000004898	mtrex	100	89.811	ENSCSEG00000018621	mtrex	97	85.868	Cynoglossus_semilaevis
ENSELUG00000004898	mtrex	100	91.605	ENSCVAG00000004556	mtrex	98	87.378	Cyprinodon_variegatus
ENSELUG00000004898	mtrex	100	93.277	ENSDARG00000013457	mtrex	98	89.990	Danio_rerio
ENSELUG00000004898	mtrex	100	89.496	ENSDNOG00000015375	MTREX	98	84.444	Dasypus_novemcinctus
ENSELUG00000004898	mtrex	100	89.391	ENSDORG00000006782	Mtrex	98	84.966	Dipodomys_ordii
ENSELUG00000004898	mtrex	99	66.737	FBgn0001986	Mtr4	95	63.473	Drosophila_melanogaster
ENSELUG00000004898	mtrex	88	75.767	ENSETEG00000000727	MTREX	89	68.342	Echinops_telfairi
ENSELUG00000004898	mtrex	100	78.466	ENSEBUG00000012869	mtrex	98	74.778	Eptatretus_burgeri
ENSELUG00000004898	mtrex	100	89.496	ENSEASG00005013270	MTREX	98	85.257	Equus_asinus_asinus
ENSELUG00000004898	mtrex	100	89.601	ENSECAG00000023723	MTREX	98	92.500	Equus_caballus
ENSELUG00000004898	mtrex	98	81.049	ENSEEUG00000000527	MTREX	99	77.357	Erinaceus_europaeus
ENSELUG00000004898	mtrex	100	89.601	ENSFCAG00000010575	MTREX	98	84.913	Felis_catus
ENSELUG00000004898	mtrex	100	88.761	ENSFALG00000010850	MTREX	98	84.555	Ficedula_albicollis
ENSELUG00000004898	mtrex	100	89.076	ENSFDAG00000011199	MTREX	98	84.399	Fukomys_damarensis
ENSELUG00000004898	mtrex	100	91.186	ENSFHEG00000023014	mtrex	100	84.937	Fundulus_heteroclitus
ENSELUG00000004898	mtrex	96	90.383	ENSGMOG00000014702	mtrex	100	83.184	Gadus_morhua
ENSELUG00000004898	mtrex	100	89.496	ENSGALG00000014709	MTREX	85	85.519	Gallus_gallus
ENSELUG00000004898	mtrex	100	90.871	ENSGAFG00000012425	mtrex	100	88.170	Gambusia_affinis
ENSELUG00000004898	mtrex	100	86.660	ENSGACG00000016260	mtrex	96	88.261	Gasterosteus_aculeatus
ENSELUG00000004898	mtrex	100	90.126	ENSGAGG00000020036	MTREX	98	86.523	Gopherus_agassizii
ENSELUG00000004898	mtrex	100	89.496	ENSGGOG00000001867	MTREX	98	85.063	Gorilla_gorilla
ENSELUG00000004898	mtrex	100	91.501	ENSHBUG00000006229	mtrex	98	87.781	Haplochromis_burtoni
ENSELUG00000004898	mtrex	100	89.391	ENSHGLG00000019445	SKIV2L2	98	84.399	Heterocephalus_glaber_female
ENSELUG00000004898	mtrex	100	89.391	ENSHGLG00100011833	SKIV2L2	98	84.399	Heterocephalus_glaber_male
ENSELUG00000004898	mtrex	100	87.678	ENSHCOG00000019995	mtrex	100	87.169	Hippocampus_comes
ENSELUG00000004898	mtrex	100	92.647	ENSIPUG00000024348	skiv2l2	98	89.422	Ictalurus_punctatus
ENSELUG00000004898	mtrex	100	89.496	ENSSTOG00000010802	MTREX	98	84.966	Ictidomys_tridecemlineatus
ENSELUG00000004898	mtrex	100	84.034	ENSJJAG00000020975	Mtrex	98	80.488	Jaculus_jaculus
ENSELUG00000004898	mtrex	100	90.871	ENSKMAG00000012642	mtrex	100	88.016	Kryptolebias_marmoratus
ENSELUG00000004898	mtrex	100	91.081	ENSLBEG00000019367	mtrex	98	89.507	Labrus_bergylta
ENSELUG00000004898	mtrex	100	91.071	ENSLACG00000009075	MTREX	98	87.757	Latimeria_chalumnae
ENSELUG00000004898	mtrex	100	92.872	ENSLOCG00000010186	mtrex	98	90.010	Lepisosteus_oculatus
ENSELUG00000004898	mtrex	99	87.290	ENSLAFG00000010497	MTREX	98	83.495	Loxodonta_africana
ENSELUG00000004898	mtrex	100	89.496	ENSMFAG00000031610	MTREX	98	85.160	Macaca_fascicularis
ENSELUG00000004898	mtrex	100	89.391	ENSMMUG00000010379	MTREX	98	84.981	Macaca_mulatta
ENSELUG00000004898	mtrex	100	89.496	ENSMNEG00000032746	MTREX	98	85.160	Macaca_nemestrina
ENSELUG00000004898	mtrex	100	89.496	ENSMLEG00000041051	MTREX	98	85.160	Mandrillus_leucophaeus
ENSELUG00000004898	mtrex	100	92.227	ENSMAMG00000016753	mtrex	100	88.153	Mastacembelus_armatus
ENSELUG00000004898	mtrex	100	91.501	ENSMZEG00005000414	mtrex	98	87.781	Maylandia_zebra
ENSELUG00000004898	mtrex	99	64.017	ENSMGAG00000003980	MTREX	98	62.027	Meleagris_gallopavo
ENSELUG00000004898	mtrex	100	89.601	ENSMAUG00000010727	Mtrex	98	84.854	Mesocricetus_auratus
ENSELUG00000004898	mtrex	100	89.706	ENSMICG00000012779	MTREX	98	85.257	Microcebus_murinus
ENSELUG00000004898	mtrex	100	89.391	ENSMOCG00000019886	Mtrex	98	84.720	Microtus_ochrogaster
ENSELUG00000004898	mtrex	100	90.241	ENSMMOG00000002476	mtrex	100	86.400	Mola_mola
ENSELUG00000004898	mtrex	100	89.811	ENSMODG00000019494	MTREX	100	83.543	Monodelphis_domestica
ENSELUG00000004898	mtrex	100	85.773	ENSMALG00000002917	mtrex	98	85.773	Monopterus_albus
ENSELUG00000004898	mtrex	100	89.286	MGP_CAROLIEiJ_G0018896	Mtrex	98	84.302	Mus_caroli
ENSELUG00000004898	mtrex	100	89.286	ENSMUSG00000016018	Mtrex	98	84.302	Mus_musculus
ENSELUG00000004898	mtrex	100	89.286	MGP_PahariEiJ_G0015967	Mtrex	98	84.205	Mus_pahari
ENSELUG00000004898	mtrex	100	89.286	MGP_SPRETEiJ_G0019775	Mtrex	98	84.302	Mus_spretus
ENSELUG00000004898	mtrex	100	89.601	ENSMPUG00000007619	MTREX	98	85.257	Mustela_putorius_furo
ENSELUG00000004898	mtrex	100	89.005	ENSMLUG00000001152	MTREX	98	84.318	Myotis_lucifugus
ENSELUG00000004898	mtrex	100	89.391	ENSNGAG00000011938	Mtrex	98	84.966	Nannospalax_galili
ENSELUG00000004898	mtrex	100	91.605	ENSNBRG00000011293	mtrex	98	87.879	Neolamprologus_brichardi
ENSELUG00000004898	mtrex	100	85.220	ENSNLEG00000001494	MTREX	98	81.026	Nomascus_leucogenys
ENSELUG00000004898	mtrex	82	98.039	ENSMEUG00000006496	-	83	98.039	Notamacropus_eugenii
ENSELUG00000004898	mtrex	100	74.895	ENSOPRG00000008009	MTREX	95	74.496	Ochotona_princeps
ENSELUG00000004898	mtrex	100	89.076	ENSODEG00000017234	MTREX	98	84.481	Octodon_degus
ENSELUG00000004898	mtrex	100	91.186	ENSONIG00000007587	mtrex	98	87.488	Oreochromis_niloticus
ENSELUG00000004898	mtrex	54	83.915	ENSOANG00000004885	-	99	83.915	Ornithorhynchus_anatinus
ENSELUG00000004898	mtrex	100	89.706	ENSOCUG00000004463	MTREX	98	85.271	Oryctolagus_cuniculus
ENSELUG00000004898	mtrex	100	90.966	ENSORLG00000005443	mtrex	98	86.974	Oryzias_latipes
ENSELUG00000004898	mtrex	100	90.861	ENSORLG00020006329	mtrex	98	87.398	Oryzias_latipes_hni
ENSELUG00000004898	mtrex	100	91.071	ENSORLG00015012924	mtrex	98	87.602	Oryzias_latipes_hsok
ENSELUG00000004898	mtrex	100	90.262	ENSOMEG00000008825	mtrex	98	86.439	Oryzias_melastigma
ENSELUG00000004898	mtrex	100	89.706	ENSOGAG00000002886	MTREX	98	85.160	Otolemur_garnettii
ENSELUG00000004898	mtrex	100	89.110	ENSOARG00000007764	MTREX	98	84.623	Ovis_aries
ENSELUG00000004898	mtrex	100	89.496	ENSPPAG00000039291	MTREX	98	85.063	Pan_paniscus
ENSELUG00000004898	mtrex	100	89.601	ENSPPRG00000019701	MTREX	98	84.913	Panthera_pardus
ENSELUG00000004898	mtrex	100	88.025	ENSPTIG00000009313	MTREX	98	83.462	Panthera_tigris_altaica
ENSELUG00000004898	mtrex	100	89.496	ENSPTRG00000016878	MTREX	98	85.063	Pan_troglodytes
ENSELUG00000004898	mtrex	100	89.391	ENSPANG00000009697	MTREX	98	85.063	Papio_anubis
ENSELUG00000004898	mtrex	100	92.437	ENSPKIG00000020833	mtrex	100	88.473	Paramormyrops_kingsleyae
ENSELUG00000004898	mtrex	100	90.126	ENSPSIG00000012150	MTREX	98	86.187	Pelodiscus_sinensis
ENSELUG00000004898	mtrex	100	89.413	ENSPMGG00000002582	mtrex	100	85.388	Periophthalmus_magnuspinnatus
ENSELUG00000004898	mtrex	95	69.801	ENSPMAG00000009668	mtrex	100	67.069	Petromyzon_marinus
ENSELUG00000004898	mtrex	100	89.811	ENSPCIG00000024730	MTREX	100	89.811	Phascolarctos_cinereus
ENSELUG00000004898	mtrex	83	90.621	ENSPFOG00000003141	mtrex	100	90.621	Poecilia_formosa
ENSELUG00000004898	mtrex	100	91.605	ENSPLAG00000021311	mtrex	98	87.390	Poecilia_latipinna
ENSELUG00000004898	mtrex	100	90.231	ENSPMEG00000010597	mtrex	99	91.208	Poecilia_mexicana
ENSELUG00000004898	mtrex	100	91.396	ENSPREG00000003089	mtrex	100	85.841	Poecilia_reticulata
ENSELUG00000004898	mtrex	98	89.400	ENSPPYG00000015469	MTREX	98	84.519	Pongo_abelii
ENSELUG00000004898	mtrex	94	77.674	ENSPCAG00000013120	MTREX	94	77.674	Procavia_capensis
ENSELUG00000004898	mtrex	99	83.391	ENSPCOG00000018092	MTREX	98	79.310	Propithecus_coquereli
ENSELUG00000004898	mtrex	100	89.496	ENSPVAG00000002445	MTREX	98	84.966	Pteropus_vampyrus
ENSELUG00000004898	mtrex	100	91.396	ENSPNYG00000006164	mtrex	98	87.683	Pundamilia_nyererei
ENSELUG00000004898	mtrex	100	93.277	ENSPNAG00000008794	mtrex	98	90.597	Pygocentrus_nattereri
ENSELUG00000004898	mtrex	98	89.186	ENSRNOG00000010125	Mtrex	96	84.548	Rattus_norvegicus
ENSELUG00000004898	mtrex	100	87.710	ENSRBIG00000034930	MTREX	98	83.123	Rhinopithecus_bieti
ENSELUG00000004898	mtrex	100	89.496	ENSRROG00000039895	MTREX	98	84.772	Rhinopithecus_roxellana
ENSELUG00000004898	mtrex	98	56.113	YJL050W	MTR4	94	53.079	Saccharomyces_cerevisiae
ENSELUG00000004898	mtrex	100	89.601	ENSSBOG00000026693	MTREX	96	87.284	Saimiri_boliviensis_boliviensis
ENSELUG00000004898	mtrex	100	89.916	ENSSHAG00000004600	MTREX	96	88.994	Sarcophilus_harrisii
ENSELUG00000004898	mtrex	100	92.857	ENSSFOG00015014355	skiv2l2	100	87.292	Scleropages_formosus
ENSELUG00000004898	mtrex	100	91.291	ENSSMAG00000007572	mtrex	98	87.573	Scophthalmus_maximus
ENSELUG00000004898	mtrex	100	91.396	ENSSDUG00000023789	mtrex	100	86.746	Seriola_dumerili
ENSELUG00000004898	mtrex	100	91.501	ENSSLDG00000006301	mtrex	100	87.065	Seriola_lalandi_dorsalis
ENSELUG00000004898	mtrex	100	89.181	ENSSARG00000008387	MTREX	98	83.043	Sorex_araneus
ENSELUG00000004898	mtrex	89	88.750	ENSSPUG00000007071	MTREX	94	87.734	Sphenodon_punctatus
ENSELUG00000004898	mtrex	100	89.916	ENSSPAG00000011319	mtrex	100	86.508	Stegastes_partitus
ENSELUG00000004898	mtrex	100	89.601	ENSSSCG00000016911	MTREX	98	84.966	Sus_scrofa
ENSELUG00000004898	mtrex	100	88.025	ENSTGUG00000002480	MTREX	98	83.691	Taeniopygia_guttata
ENSELUG00000004898	mtrex	100	89.927	ENSTRUG00000014571	mtrex	98	86.301	Takifugu_rubripes
ENSELUG00000004898	mtrex	96	76.780	ENSTBEG00000007769	MTREX	98	70.029	Tupaia_belangeri
ENSELUG00000004898	mtrex	100	89.181	ENSTTRG00000008678	MTREX	98	84.399	Tursiops_truncatus
ENSELUG00000004898	mtrex	100	89.496	ENSUAMG00000023061	MTREX	98	85.160	Ursus_americanus
ENSELUG00000004898	mtrex	100	88.784	ENSUMAG00000009373	MTREX	99	89.829	Ursus_maritimus
ENSELUG00000004898	mtrex	100	79.412	ENSVPAG00000011174	MTREX	98	75.267	Vicugna_pacos
ENSELUG00000004898	mtrex	100	89.601	ENSVVUG00000021337	MTREX	98	85.354	Vulpes_vulpes
ENSELUG00000004898	mtrex	100	89.706	ENSXETG00000032798	MTREX	98	86.373	Xenopus_tropicalis
ENSELUG00000004898	mtrex	100	90.976	ENSXMAG00000004799	mtrex	100	89.468	Xiphophorus_maculatus