EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000004986 (Gene tree)
Gene ID: 105014052
Gene Symbol: srrm4
Alias: ZnSR100|im:7136231|si:dkey-1k23.1
Full Name: serine/arginine repetitive matrix 4
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 61685 bases
Position: chrLG13:4144689-4206373
Accession: 105014052
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000003796	SRRM_C	PF15230.6	3.7e-22	1	1
ENSELUP00000028407	SRRM_C	PF15230.6	8.1e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000013428	-	4678	XM_010876031	ENSELUP00000003796	495 (aa)	XP_010874333	UPI000577AEA0
ENSELUT00000013453	-	1491	-	ENSELUP00000028407	496 (aa)	-	-

Gene Model

Click here to download ENSELUG00000004986's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000004986's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000004986	srrm4	93	60.860	ENSAPOG00000010969	srrm4	67	73.438	Acanthochromis_polyacanthus
ENSELUG00000004986	srrm4	66	69.643	ENSACIG00000002171	srrm4	65	89.474	Amphilophus_citrinellus
ENSELUG00000004986	srrm4	84	60.287	ENSAOCG00000019891	srrm4	66	73.438	Amphiprion_ocellaris
ENSELUG00000004986	srrm4	83	59.854	ENSAPEG00000011132	srrm4	66	73.438	Amphiprion_percula
ENSELUG00000004986	srrm4	62	79.545	ENSATEG00000005330	srrm4	73	61.644	Anabas_testudineus
ENSELUG00000004986	srrm4	62	49.679	ENSACLG00000023532	srrm4	57	51.373	Astatotilapia_calliptera
ENSELUG00000004986	srrm4	60	43.934	ENSFHEG00000005091	srrm4	66	47.860	Fundulus_heteroclitus
ENSELUG00000004986	srrm4	68	43.553	ENSGMOG00000006714	srrm4	74	43.939	Gadus_morhua
ENSELUG00000004986	srrm4	84	53.901	ENSHBUG00000010505	srrm4	67	73.438	Haplochromis_burtoni
ENSELUG00000004986	srrm4	79	52.778	ENSKMAG00000001873	srrm4	61	52.308	Kryptolebias_marmoratus
ENSELUG00000004986	srrm4	79	56.140	ENSLBEG00000008471	srrm4	60	56.555	Labrus_bergylta
ENSELUG00000004986	srrm4	62	49.679	ENSMZEG00005021733	srrm4	57	51.373	Maylandia_zebra
ENSELUG00000004986	srrm4	81	58.750	ENSMALG00000001422	srrm4	67	57.623	Monopterus_albus
ENSELUG00000004986	srrm4	62	49.355	ENSNBRG00000015313	srrm4	81	44.601	Neolamprologus_brichardi
ENSELUG00000004986	srrm4	84	59.145	ENSONIG00000010552	srrm4	74	49.618	Oreochromis_niloticus
ENSELUG00000004986	srrm4	88	50.000	ENSOMEG00000012376	srrm4	51	61.290	Oryzias_melastigma
ENSELUG00000004986	srrm4	79	65.217	ENSPMGG00000008387	srrm4	72	66.197	Periophthalmus_magnuspinnatus
ENSELUG00000004986	srrm4	84	49.640	ENSPFOG00000014600	srrm4	85	46.649	Poecilia_formosa
ENSELUG00000004986	srrm4	61	97.143	ENSPLAG00000002006	srrm4	66	97.143	Poecilia_latipinna
ENSELUG00000004986	srrm4	61	96.875	ENSPREG00000004567	srrm4	64	44.237	Poecilia_reticulata
ENSELUG00000004986	srrm4	54	59.786	ENSPNYG00000007785	srrm4	80	43.029	Pundamilia_nyererei
ENSELUG00000004986	srrm4	68	69.697	ENSSDUG00000017519	srrm4	76	55.200	Seriola_dumerili
ENSELUG00000004986	srrm4	67	68.750	ENSSLDG00000015130	srrm4	77	70.588	Seriola_lalandi_dorsalis
ENSELUG00000004986	srrm4	62	48.867	ENSSPAG00000016190	srrm4	87	45.934	Stegastes_partitus
ENSELUG00000004986	srrm4	82	53.155	ENSXMAG00000002658	srrm4	60	50.384	Xiphophorus_maculatus