EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000005105 (Gene tree)
Gene ID: 105007732
Gene Symbol: rpac2
Alias: -
Full Name: DNA-directed RNA polymerases I and III subunit RPAC2
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 8481 bases
Position: chrLG04:691783-700263
Accession: 105007732
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000003890	RNA_pol_L_2	PF13656.6	1.6e-27	1	1
ENSELUP00000003890	RNA_pol_L	PF01193.24	1.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000013248	-	858	-	ENSELUP00000003890	114 (aa)	-	C1BYC4

Gene Model

Click here to download ENSELUG00000005105's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03020	RNA polymerase	KEGG
els04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000005105's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000005105	rpac2	86	36.735	ENSELUG00000012822	polr2j	78	36.735

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000005105	rpac2	93	67.925	ENSG00000186184	POLR1D	91	67.925	Homo_sapiens
ENSELUG00000005105	rpac2	88	80.000	ENSAPOG00000021882	polr1d	93	80.000	Acanthochromis_polyacanthus
ENSELUG00000005105	rpac2	93	69.811	ENSAMEG00000019095	POLR1D	85	69.811	Ailuropoda_melanoleuca
ENSELUG00000005105	rpac2	98	77.876	ENSACIG00000013328	polr1d	97	77.876	Amphilophus_citrinellus
ENSELUG00000005105	rpac2	96	75.229	ENSAOCG00000018500	polr1d	96	75.229	Amphiprion_ocellaris
ENSELUG00000005105	rpac2	92	77.143	ENSAPEG00000009489	polr1d	92	77.143	Amphiprion_percula
ENSELUG00000005105	rpac2	98	80.357	ENSATEG00000019322	polr1d	97	80.357	Anabas_testudineus
ENSELUG00000005105	rpac2	89	67.647	ENSACAG00000015753	POLR1D	88	67.647	Anolis_carolinensis
ENSELUG00000005105	rpac2	93	68.868	ENSANAG00000024486	POLR1D	80	68.868	Aotus_nancymaae
ENSELUG00000005105	rpac2	98	80.357	ENSACLG00000023805	polr1d	97	80.357	Astatotilapia_calliptera
ENSELUG00000005105	rpac2	99	77.876	ENSAMXG00000036118	polr1d	98	77.876	Astyanax_mexicanus
ENSELUG00000005105	rpac2	96	67.544	ENSBTAG00000033252	-	86	67.544	Bos_taurus
ENSELUG00000005105	rpac2	96	67.544	ENSBTAG00000008642	POLR1D	86	67.544	Bos_taurus
ENSELUG00000005105	rpac2	77	34.091	WBGene00010230	rpac-19	61	34.091	Caenorhabditis_elegans
ENSELUG00000005105	rpac2	93	68.868	ENSCJAG00000044669	POLR1D	80	68.868	Callithrix_jacchus
ENSELUG00000005105	rpac2	93	69.811	ENSCAFG00000006755	POLR1D	80	69.811	Canis_familiaris
ENSELUG00000005105	rpac2	93	70.755	ENSCHIG00000021910	POLR1D	80	70.755	Capra_hircus
ENSELUG00000005105	rpac2	92	58.879	ENSTSYG00000034852	-	88	58.879	Carlito_syrichta
ENSELUG00000005105	rpac2	93	69.811	ENSTSYG00000026817	-	80	69.811	Carlito_syrichta
ENSELUG00000005105	rpac2	57	58.462	ENSCAPG00000006058	-	66	58.462	Cavia_aperea
ENSELUG00000005105	rpac2	57	58.462	ENSCPOG00000030450	-	66	58.462	Cavia_porcellus
ENSELUG00000005105	rpac2	93	50.943	ENSCCAG00000020191	-	77	50.943	Cebus_capucinus
ENSELUG00000005105	rpac2	93	69.811	ENSCCAG00000021349	-	80	69.811	Cebus_capucinus
ENSELUG00000005105	rpac2	93	56.604	ENSCATG00000022900	-	79	56.604	Cercocebus_atys
ENSELUG00000005105	rpac2	93	67.925	ENSCATG00000030710	-	80	67.925	Cercocebus_atys
ENSELUG00000005105	rpac2	93	68.868	ENSCLAG00000017623	POLR1D	85	68.868	Chinchilla_lanigera
ENSELUG00000005105	rpac2	84	79.167	ENSCPBG00000004719	POLR1D	95	79.167	Chrysemys_picta_bellii
ENSELUG00000005105	rpac2	93	67.925	ENSCANG00000028632	-	80	67.925	Colobus_angolensis_palliatus
ENSELUG00000005105	rpac2	93	65.094	ENSCANG00000037694	-	80	65.094	Colobus_angolensis_palliatus
ENSELUG00000005105	rpac2	93	66.981	ENSCGRG00001021251	Polr1d	80	66.981	Cricetulus_griseus_chok1gshd
ENSELUG00000005105	rpac2	93	66.981	ENSCGRG00000011639	Polr1d	80	66.981	Cricetulus_griseus_crigri
ENSELUG00000005105	rpac2	92	80.952	ENSCSEG00000018268	polr1d	96	78.571	Cynoglossus_semilaevis
ENSELUG00000005105	rpac2	89	82.178	ENSCVAG00000018527	polr1d	89	82.178	Cyprinodon_variegatus
ENSELUG00000005105	rpac2	91	75.962	ENSDARG00000037570	polr1d	93	75.962	Danio_rerio
ENSELUG00000005105	rpac2	93	65.094	ENSDNOG00000046247	-	79	65.094	Dasypus_novemcinctus
ENSELUG00000005105	rpac2	93	66.981	ENSDNOG00000043676	-	80	66.981	Dasypus_novemcinctus
ENSELUG00000005105	rpac2	93	67.925	ENSDORG00000029155	Polr1d	80	67.925	Dipodomys_ordii
ENSELUG00000005105	rpac2	76	49.425	FBgn0086447	l(2)37Cg	82	49.425	Drosophila_melanogaster
ENSELUG00000005105	rpac2	93	68.868	ENSETEG00000012797	POLR1D	85	68.868	Echinops_telfairi
ENSELUG00000005105	rpac2	80	70.330	ENSEBUG00000011748	polr1d	63	70.330	Eptatretus_burgeri
ENSELUG00000005105	rpac2	93	68.868	ENSEASG00005022487	POLR1D	82	68.868	Equus_asinus_asinus
ENSELUG00000005105	rpac2	93	69.811	ENSEEUG00000013144	POLR1D	85	69.811	Erinaceus_europaeus
ENSELUG00000005105	rpac2	93	68.868	ENSFCAG00000030162	POLR1D	80	68.868	Felis_catus
ENSELUG00000005105	rpac2	86	78.571	ENSFALG00000011463	POLR1D	97	78.571	Ficedula_albicollis
ENSELUG00000005105	rpac2	93	66.981	ENSFDAG00000004463	POLR1D	80	66.981	Fukomys_damarensis
ENSELUG00000005105	rpac2	95	77.778	ENSFHEG00000015410	polr1d	94	77.778	Fundulus_heteroclitus
ENSELUG00000005105	rpac2	56	70.312	ENSGALG00000007470	POLR1D	63	70.312	Gallus_gallus
ENSELUG00000005105	rpac2	98	77.679	ENSGAFG00000001693	polr1d	97	77.679	Gambusia_affinis
ENSELUG00000005105	rpac2	94	83.178	ENSGACG00000018585	polr1d	90	83.178	Gasterosteus_aculeatus
ENSELUG00000005105	rpac2	92	78.095	ENSGAGG00000008503	POLR1D	92	78.095	Gopherus_agassizii
ENSELUG00000005105	rpac2	93	67.925	ENSGGOG00000004235	POLR1D	80	67.925	Gorilla_gorilla
ENSELUG00000005105	rpac2	100	78.448	ENSHBUG00000002111	polr1d	97	80.357	Haplochromis_burtoni
ENSELUG00000005105	rpac2	93	67.925	ENSHGLG00000003202	POLR1D	80	67.925	Heterocephalus_glaber_female
ENSELUG00000005105	rpac2	93	67.925	ENSHGLG00100009393	POLR1D	80	67.925	Heterocephalus_glaber_male
ENSELUG00000005105	rpac2	96	72.727	ENSHCOG00000003258	polr1d	96	72.727	Hippocampus_comes
ENSELUG00000005105	rpac2	99	80.531	ENSIPUG00000014810	polr1d	98	80.531	Ictalurus_punctatus
ENSELUG00000005105	rpac2	93	68.868	ENSSTOG00000013877	POLR1D	80	68.868	Ictidomys_tridecemlineatus
ENSELUG00000005105	rpac2	93	65.094	ENSJJAG00000022671	-	88	65.094	Jaculus_jaculus
ENSELUG00000005105	rpac2	93	50.000	ENSJJAG00000021667	-	62	50.000	Jaculus_jaculus
ENSELUG00000005105	rpac2	92	77.143	ENSKMAG00000015256	polr1d	92	77.143	Kryptolebias_marmoratus
ENSELUG00000005105	rpac2	98	81.250	ENSLBEG00000015919	polr1d	97	81.250	Labrus_bergylta
ENSELUG00000005105	rpac2	96	69.091	ENSLACG00000006810	POLR1D	92	69.091	Latimeria_chalumnae
ENSELUG00000005105	rpac2	64	80.822	ENSLOCG00000014976	polr1d	99	80.822	Lepisosteus_oculatus
ENSELUG00000005105	rpac2	93	66.981	ENSLAFG00000032290	POLR1D	80	66.981	Loxodonta_africana
ENSELUG00000005105	rpac2	93	67.925	ENSMFAG00000045264	POLR1D	82	67.925	Macaca_fascicularis
ENSELUG00000005105	rpac2	70	62.500	ENSMMUG00000041570	-	72	62.500	Macaca_mulatta
ENSELUG00000005105	rpac2	93	67.925	ENSMMUG00000020386	POLR1D	91	67.925	Macaca_mulatta
ENSELUG00000005105	rpac2	93	67.925	ENSMNEG00000008630	-	80	67.925	Macaca_nemestrina
ENSELUG00000005105	rpac2	93	51.887	ENSMNEG00000038120	-	78	51.887	Macaca_nemestrina
ENSELUG00000005105	rpac2	93	57.547	ENSMLEG00000032251	-	79	57.547	Mandrillus_leucophaeus
ENSELUG00000005105	rpac2	93	67.925	ENSMLEG00000041048	-	80	67.925	Mandrillus_leucophaeus
ENSELUG00000005105	rpac2	88	85.000	ENSMAMG00000014834	polr1d	93	85.000	Mastacembelus_armatus
ENSELUG00000005105	rpac2	88	85.000	ENSMZEG00005006638	polr1d	88	85.000	Maylandia_zebra
ENSELUG00000005105	rpac2	81	77.174	ENSMGAG00000005322	POLR1D	84	77.174	Meleagris_gallopavo
ENSELUG00000005105	rpac2	93	66.981	ENSMAUG00000001946	Polr1d	80	66.981	Mesocricetus_auratus
ENSELUG00000005105	rpac2	85	59.794	ENSMICG00000007349	-	72	59.794	Microcebus_murinus
ENSELUG00000005105	rpac2	93	69.811	ENSMICG00000016883	-	80	69.811	Microcebus_murinus
ENSELUG00000005105	rpac2	93	66.038	ENSMOCG00000021288	Polr1d	80	66.038	Microtus_ochrogaster
ENSELUG00000005105	rpac2	98	77.679	ENSMMOG00000009605	polr1d	97	77.679	Mola_mola
ENSELUG00000005105	rpac2	94	71.963	ENSMODG00000023881	POLR1D	94	71.963	Monodelphis_domestica
ENSELUG00000005105	rpac2	98	76.786	ENSMALG00000010652	polr1d	97	76.786	Monopterus_albus
ENSELUG00000005105	rpac2	92	65.714	MGP_CAROLIEiJ_G0028034	Polr1d	79	65.714	Mus_caroli
ENSELUG00000005105	rpac2	93	65.094	ENSMUSG00000029642	Polr1d	80	65.094	Mus_musculus
ENSELUG00000005105	rpac2	93	65.094	MGP_PahariEiJ_G0024600	Polr1d	80	65.094	Mus_pahari
ENSELUG00000005105	rpac2	93	66.038	MGP_SPRETEiJ_G0029032	Polr1d	80	66.038	Mus_spretus
ENSELUG00000005105	rpac2	93	69.811	ENSMLUG00000027169	-	80	69.811	Myotis_lucifugus
ENSELUG00000005105	rpac2	93	65.094	ENSMLUG00000004118	-	80	65.094	Myotis_lucifugus
ENSELUG00000005105	rpac2	95	67.593	ENSNGAG00000006014	Polr1d	93	67.593	Nannospalax_galili
ENSELUG00000005105	rpac2	98	80.357	ENSNBRG00000020327	polr1d	97	80.357	Neolamprologus_brichardi
ENSELUG00000005105	rpac2	93	67.925	ENSNLEG00000000358	POLR1D	80	67.925	Nomascus_leucogenys
ENSELUG00000005105	rpac2	93	68.868	ENSODEG00000005294	-	80	68.868	Octodon_degus
ENSELUG00000005105	rpac2	93	57.547	ENSODEG00000014801	-	77	57.547	Octodon_degus
ENSELUG00000005105	rpac2	90	77.670	ENSOANG00000008708	-	95	77.670	Ornithorhynchus_anatinus
ENSELUG00000005105	rpac2	93	68.868	ENSOCUG00000015706	POLR1D	65	68.868	Oryctolagus_cuniculus
ENSELUG00000005105	rpac2	98	75.893	ENSORLG00000010257	polr1d	97	75.893	Oryzias_latipes
ENSELUG00000005105	rpac2	98	75.893	ENSORLG00020000533	polr1d	75	75.893	Oryzias_latipes_hni
ENSELUG00000005105	rpac2	98	75.000	ENSORLG00015013267	polr1d	74	75.000	Oryzias_latipes_hsok
ENSELUG00000005105	rpac2	94	76.636	ENSOMEG00000014912	polr1d	71	76.636	Oryzias_melastigma
ENSELUG00000005105	rpac2	93	67.925	ENSOGAG00000014601	POLR1D	80	67.925	Otolemur_garnettii
ENSELUG00000005105	rpac2	93	70.755	ENSOARG00000017005	POLR1D	82	70.755	Ovis_aries
ENSELUG00000005105	rpac2	93	67.925	ENSPPAG00000028138	POLR1D	80	67.925	Pan_paniscus
ENSELUG00000005105	rpac2	93	68.868	ENSPPRG00000003381	POLR1D	80	68.868	Panthera_pardus
ENSELUG00000005105	rpac2	93	68.868	ENSPTIG00000018137	POLR1D	80	68.868	Panthera_tigris_altaica
ENSELUG00000005105	rpac2	93	67.925	ENSPTRG00000005734	POLR1D	80	67.925	Pan_troglodytes
ENSELUG00000005105	rpac2	93	55.660	ENSPANG00000035051	-	79	55.660	Papio_anubis
ENSELUG00000005105	rpac2	93	67.925	ENSPANG00000020259	-	80	67.925	Papio_anubis
ENSELUG00000005105	rpac2	85	80.412	ENSPKIG00000021891	polr1d	98	60.976	Paramormyrops_kingsleyae
ENSELUG00000005105	rpac2	94	72.897	ENSPSIG00000011822	POLR1D	83	72.897	Pelodiscus_sinensis
ENSELUG00000005105	rpac2	92	68.571	ENSPMGG00000012998	POLR1D	76	68.571	Periophthalmus_magnuspinnatus
ENSELUG00000005105	rpac2	92	77.143	ENSPMGG00000010359	polr1d	91	77.143	Periophthalmus_magnuspinnatus
ENSELUG00000005105	rpac2	93	64.151	ENSPEMG00000006336	-	82	64.151	Peromyscus_maniculatus_bairdii
ENSELUG00000005105	rpac2	97	61.261	ENSPMAG00000004228	polr1d	92	61.261	Petromyzon_marinus
ENSELUG00000005105	rpac2	92	72.381	ENSPCIG00000001673	POLR1D	92	72.381	Phascolarctos_cinereus
ENSELUG00000005105	rpac2	98	78.571	ENSPFOG00000023343	polr1d	97	78.571	Poecilia_formosa
ENSELUG00000005105	rpac2	98	78.571	ENSPLAG00000009675	polr1d	97	78.571	Poecilia_latipinna
ENSELUG00000005105	rpac2	98	78.571	ENSPMEG00000004628	polr1d	97	78.571	Poecilia_mexicana
ENSELUG00000005105	rpac2	98	78.571	ENSPREG00000022032	polr1d	97	78.571	Poecilia_reticulata
ENSELUG00000005105	rpac2	93	68.868	ENSPCOG00000028175	POLR1D	80	68.868	Propithecus_coquereli
ENSELUG00000005105	rpac2	98	80.357	ENSPNYG00000000107	polr1d	97	80.357	Pundamilia_nyererei
ENSELUG00000005105	rpac2	94	73.832	ENSPNAG00000001512	polr1d	94	72.321	Pygocentrus_nattereri
ENSELUG00000005105	rpac2	93	65.094	ENSRBIG00000000336	-	80	65.094	Rhinopithecus_bieti
ENSELUG00000005105	rpac2	93	67.925	ENSRBIG00000036378	-	80	67.925	Rhinopithecus_bieti
ENSELUG00000005105	rpac2	93	66.038	ENSRROG00000026751	-	80	66.038	Rhinopithecus_roxellana
ENSELUG00000005105	rpac2	93	67.925	ENSRROG00000042232	-	80	67.925	Rhinopithecus_roxellana
ENSELUG00000005105	rpac2	79	52.222	YNL113W	RPC19	63	52.222	Saccharomyces_cerevisiae
ENSELUG00000005105	rpac2	93	68.868	ENSSBOG00000028482	-	80	68.868	Saimiri_boliviensis_boliviensis
ENSELUG00000005105	rpac2	83	70.526	ENSSBOG00000030146	-	70	70.526	Saimiri_boliviensis_boliviensis
ENSELUG00000005105	rpac2	95	69.444	ENSSHAG00000001190	POLR1D	84	69.444	Sarcophilus_harrisii
ENSELUG00000005105	rpac2	93	79.245	ENSSFOG00015011375	polr1d	93	79.245	Scleropages_formosus
ENSELUG00000005105	rpac2	98	81.250	ENSSMAG00000011861	polr1d	97	81.250	Scophthalmus_maximus
ENSELUG00000005105	rpac2	98	80.357	ENSSDUG00000011930	polr1d	97	80.357	Seriola_dumerili
ENSELUG00000005105	rpac2	88	85.000	ENSSLDG00000023871	polr1d	84	85.000	Seriola_lalandi_dorsalis
ENSELUG00000005105	rpac2	93	69.811	ENSSARG00000007840	POLR1D	80	69.811	Sorex_araneus
ENSELUG00000005105	rpac2	87	74.747	ENSSPUG00000005786	POLR1D	88	71.845	Sphenodon_punctatus
ENSELUG00000005105	rpac2	94	82.243	ENSSPAG00000011764	polr1d	93	82.243	Stegastes_partitus
ENSELUG00000005105	rpac2	91	70.192	ENSSSCG00000009310	POLR1D	78	70.192	Sus_scrofa
ENSELUG00000005105	rpac2	83	77.895	ENSTGUG00000005450	POLR1D	99	77.895	Taeniopygia_guttata
ENSELUG00000005105	rpac2	95	76.852	ENSTRUG00000019741	polr1d	94	76.852	Takifugu_rubripes
ENSELUG00000005105	rpac2	93	68.868	ENSTBEG00000007006	POLR1D	85	68.868	Tupaia_belangeri
ENSELUG00000005105	rpac2	93	69.811	ENSUAMG00000011413	POLR1D	80	69.811	Ursus_americanus
ENSELUG00000005105	rpac2	93	69.811	ENSUMAG00000016968	POLR1D	83	69.811	Ursus_maritimus
ENSELUG00000005105	rpac2	93	69.811	ENSVVUG00000009216	POLR1D	80	69.811	Vulpes_vulpes
ENSELUG00000005105	rpac2	88	83.000	ENSXCOG00000011731	polr1d	76	83.000	Xiphophorus_couchianus
ENSELUG00000005105	rpac2	88	82.000	ENSXMAG00000017538	polr1d	76	82.000	Xiphophorus_maculatus