EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000005136 (Gene tree)
Gene ID: 105026685
Gene Symbol: TCP4
Alias: -
Full Name: activated RNA polymerase II transcriptional coactivator p15-like
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 5838 bases
Position: chrLG14:3517424-3523261
Accession: 105026685
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000003928	PC4	PF02229.16	1.5e-25	1	1
ENSELUP00000003936	PC4	PF02229.16	1.5e-25	1	1
ENSELUP00000003907	PC4	PF02229.16	1.5e-25	1	1
ENSELUP00000028493	PC4	PF02229.16	1.6e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000013227	-	506	-	ENSELUP00000003907	131 (aa)	-	-
ENSELUT00000013189	-	836	-	ENSELUP00000003936	130 (aa)	-	C1BX72
ENSELUT00000013203	-	1121	XM_010898292	ENSELUP00000003928	130 (aa)	XP_010896594	C1BX72
ENSELUT00000013247	-	2258	-	ENSELUP00000028493	137 (aa)	-	-

Gene Model

Click here to download ENSELUG00000005136's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000005136's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000005136	TCP4	100	66.923	ENSELUG00000022688	sub1	100	73.485

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000005136	TCP4	98	68.750	ENSAMXG00000038560	-	98	73.438	Astyanax_mexicanus
ENSELUG00000005136	TCP4	98	52.308	ENSCPBG00000010898	-	98	49.612	Chrysemys_picta_bellii
ENSELUG00000005136	TCP4	100	38.971	ENSCING00000017560	-	57	45.000	Ciona_intestinalis
ENSELUG00000005136	TCP4	100	41.538	ENSCSAVG00000009535	-	100	41.538	Ciona_savignyi
ENSELUG00000005136	TCP4	100	63.077	ENSCSEG00000011154	-	100	75.385	Cynoglossus_semilaevis
ENSELUG00000005136	TCP4	100	65.385	ENSCSEG00000009205	-	100	75.385	Cynoglossus_semilaevis
ENSELUG00000005136	TCP4	100	73.846	ENSCVAG00000021573	-	74	77.099	Cyprinodon_variegatus
ENSELUG00000005136	TCP4	53	78.261	ENSDORG00000026076	-	100	56.923	Dipodomys_ordii
ENSELUG00000005136	TCP4	71	35.870	FBgn0015299	Ssb-c31a	79	35.870	Drosophila_melanogaster
ENSELUG00000005136	TCP4	100	66.154	ENSGMOG00000011659	-	100	66.923	Gadus_morhua
ENSELUG00000005136	TCP4	100	69.231	ENSGAFG00000016251	-	100	75.385	Gambusia_affinis
ENSELUG00000005136	TCP4	100	69.231	ENSKMAG00000013670	-	100	76.154	Kryptolebias_marmoratus
ENSELUG00000005136	TCP4	98	76.562	ENSMMOG00000008698	-	98	75.781	Mola_mola
ENSELUG00000005136	TCP4	75	68.041	ENSNGAG00000001935	-	68	68.041	Nannospalax_galili
ENSELUG00000005136	TCP4	100	57.692	ENSODEG00000004776	-	100	58.462	Octodon_degus
ENSELUG00000005136	TCP4	100	73.846	ENSONIG00000013958	-	100	78.462	Oreochromis_niloticus
ENSELUG00000005136	TCP4	98	74.219	ENSORLG00000017237	sub1	98	77.344	Oryzias_latipes
ENSELUG00000005136	TCP4	98	74.219	ENSORLG00020014865	sub1	98	77.344	Oryzias_latipes_hni
ENSELUG00000005136	TCP4	98	74.219	ENSORLG00015005820	sub1	98	77.344	Oryzias_latipes_hsok
ENSELUG00000005136	TCP4	98	70.312	ENSOMEG00000003351	-	98	78.125	Oryzias_melastigma
ENSELUG00000005136	TCP4	98	75.000	ENSPMGG00000017654	-	98	75.000	Periophthalmus_magnuspinnatus
ENSELUG00000005136	TCP4	100	69.231	ENSPFOG00000017101	-	100	75.385	Poecilia_formosa
ENSELUG00000005136	TCP4	100	69.231	ENSPLAG00000015088	-	100	75.385	Poecilia_latipinna
ENSELUG00000005136	TCP4	100	69.231	ENSPMEG00000023692	-	100	75.385	Poecilia_mexicana
ENSELUG00000005136	TCP4	100	69.231	ENSPREG00000011918	-	100	75.385	Poecilia_reticulata
ENSELUG00000005136	TCP4	100	68.462	ENSXCOG00000009356	-	100	74.615	Xiphophorus_couchianus
ENSELUG00000005136	TCP4	100	68.462	ENSXMAG00000013353	-	100	74.615	Xiphophorus_maculatus