EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000005174 (Gene tree)
Gene ID: 105006462
Gene Symbol: p4ha1a
Alias: si:ch211-146f4.5
Full Name: prolyl 4-hydroxylase subunit alpha-1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 12417 bases
Position: chrLG05:11311950-11324366
Accession: 105006462
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000028512	2OG-FeII_Oxy	PF03171.20	2.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000013186	-	1660	XM_010865020	ENSELUP00000028512	545 (aa)	XP_010863322	UPI0005762D0E

Gene Model

Click here to download ENSELUG00000005174's gene model file

Pathways

Pathway ID	Pathway Name	Source
els00330	Arginine and proline metabolism	KEGG
els01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000005174's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000005174	p4ha1a	99	75.868	ENSELUG00000005913	p4ha1b	99	75.915
ENSELUG00000005174	p4ha1a	98	64.498	ENSELUG00000021666	p4ha2	99	68.197

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000005174	p4ha1a	76	63.373	ENSAPOG00000008101	p4ha1a	83	63.373	Acanthochromis_polyacanthus
ENSELUG00000005174	p4ha1a	99	75.786	ENSACIG00000014303	p4ha1a	99	76.155	Amphilophus_citrinellus
ENSELUG00000005174	p4ha1a	99	79.592	ENSAOCG00000005514	-	99	79.592	Amphiprion_ocellaris
ENSELUG00000005174	p4ha1a	99	69.759	ENSAOCG00000005531	p4ha1a	99	69.759	Amphiprion_ocellaris
ENSELUG00000005174	p4ha1a	99	79.035	ENSAPEG00000010462	-	99	79.035	Amphiprion_percula
ENSELUG00000005174	p4ha1a	100	77.656	ENSAMXG00000018364	p4ha1a	100	77.656	Astyanax_mexicanus
ENSELUG00000005174	p4ha1a	97	75.000	ENSCSEG00000001857	-	98	73.889	Cynoglossus_semilaevis
ENSELUG00000005174	p4ha1a	98	74.440	ENSCVAG00000020081	p4ha1a	98	74.440	Cyprinodon_variegatus
ENSELUG00000005174	p4ha1a	100	78.388	ENSDARG00000033537	p4ha1a	99	78.388	Danio_rerio
ENSELUG00000005174	p4ha1a	99	79.298	ENSMAMG00000010119	p4ha1a	99	79.298	Mastacembelus_armatus
ENSELUG00000005174	p4ha1a	99	71.560	ENSMMOG00000009210	-	99	71.560	Mola_mola
ENSELUG00000005174	p4ha1a	99	74.677	ENSMALG00000013083	-	99	76.066	Monopterus_albus
ENSELUG00000005174	p4ha1a	98	68.762	ENSORLG00000014906	-	94	68.762	Oryzias_latipes
ENSELUG00000005174	p4ha1a	99	70.674	ENSORLG00020015227	-	97	70.674	Oryzias_latipes_hni
ENSELUG00000005174	p4ha1a	99	70.674	ENSORLG00015012970	-	97	70.674	Oryzias_latipes_hsok
ENSELUG00000005174	p4ha1a	99	71.667	ENSOMEG00000019702	-	99	71.667	Oryzias_melastigma
ENSELUG00000005174	p4ha1a	99	78.585	ENSPKIG00000002519	p4ha1a	99	78.585	Paramormyrops_kingsleyae
ENSELUG00000005174	p4ha1a	99	73.519	ENSPREG00000016136	p4ha1a	99	73.704	Poecilia_reticulata
ENSELUG00000005174	p4ha1a	100	79.342	ENSPNAG00000025732	p4ha1a	100	80.256	Pygocentrus_nattereri
ENSELUG00000005174	p4ha1a	100	80.000	ENSSFOG00015009731	p4ha1	100	80.183	Scleropages_formosus
ENSELUG00000005174	p4ha1a	99	69.871	ENSTNIG00000003570	-	99	69.871	Tetraodon_nigroviridis