EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000005253 (Gene tree)
Gene ID: 105017631
Gene Symbol: mrps18a
Alias: RT18A
Full Name: mitochondrial ribosomal protein S18A
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 29698 bases
Position: chrLG18:11725478-11755175
Accession: 105017631
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000004060	Ribosomal_S18	PF01084.20	4.4e-17	1	1
ENSELUP00000004047	Ribosomal_S18	PF01084.20	5.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000013000	-	1852	XM_010882359	ENSELUP00000004047	210 (aa)	XP_010880661	C1BW99
ENSELUT00000012985	-	2125	-	ENSELUP00000004060	206 (aa)	-	-

Gene Model

Click here to download ENSELUG00000005253's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000005253's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000005253	mrps18a	85	59.444	ENSG00000096080	MRPS18A	91	59.444	Homo_sapiens
ENSELUG00000005253	mrps18a	85	62.778	ENSAMEG00000012117	MRPS18A	91	62.778	Ailuropoda_melanoleuca
ENSELUG00000005253	mrps18a	100	71.905	ENSACIG00000017782	mrps18a	100	71.905	Amphilophus_citrinellus
ENSELUG00000005253	mrps18a	66	63.309	ENSAOCG00000005723	mrps18a	81	63.309	Amphiprion_ocellaris
ENSELUG00000005253	mrps18a	100	68.095	ENSAPEG00000006971	mrps18a	100	68.095	Amphiprion_percula
ENSELUG00000005253	mrps18a	100	71.429	ENSATEG00000003132	mrps18a	100	71.429	Anabas_testudineus
ENSELUG00000005253	mrps18a	77	69.182	ENSAPLG00000016280	MRPS18A	100	69.182	Anas_platyrhynchos
ENSELUG00000005253	mrps18a	81	65.294	ENSACAG00000000642	MRPS18A	88	65.294	Anolis_carolinensis
ENSELUG00000005253	mrps18a	85	58.889	ENSANAG00000030889	MRPS18A	91	58.889	Aotus_nancymaae
ENSELUG00000005253	mrps18a	100	72.857	ENSACLG00000008170	mrps18a	100	72.857	Astatotilapia_calliptera
ENSELUG00000005253	mrps18a	100	61.611	ENSAMXG00000036348	mrps18a	100	61.611	Astyanax_mexicanus
ENSELUG00000005253	mrps18a	55	74.561	ENSAMXG00000036055	-	84	74.561	Astyanax_mexicanus
ENSELUG00000005253	mrps18a	85	60.000	ENSBTAG00000025571	MRPS18A	91	60.000	Bos_taurus
ENSELUG00000005253	mrps18a	55	35.965	WBGene00022583	mrps-18A	57	35.965	Caenorhabditis_elegans
ENSELUG00000005253	mrps18a	78	63.636	ENSCJAG00000017382	MRPS18A	84	63.636	Callithrix_jacchus
ENSELUG00000005253	mrps18a	87	60.109	ENSCAFG00000001928	MRPS18A	93	60.109	Canis_familiaris
ENSELUG00000005253	mrps18a	87	60.109	ENSCAFG00020012064	MRPS18A	77	60.109	Canis_lupus_dingo
ENSELUG00000005253	mrps18a	85	60.556	ENSCHIG00000013039	MRPS18A	91	60.556	Capra_hircus
ENSELUG00000005253	mrps18a	78	64.848	ENSTSYG00000001390	MRPS18A	84	64.848	Carlito_syrichta
ENSELUG00000005253	mrps18a	74	62.581	ENSCAPG00000016029	MRPS18A	94	62.581	Cavia_aperea
ENSELUG00000005253	mrps18a	85	58.791	ENSCPOG00000022949	MRPS18A	92	58.791	Cavia_porcellus
ENSELUG00000005253	mrps18a	82	61.272	ENSCCAG00000021108	MRPS18A	88	61.272	Cebus_capucinus
ENSELUG00000005253	mrps18a	83	61.364	ENSCATG00000012963	MRPS18A	91	60.000	Cercocebus_atys
ENSELUG00000005253	mrps18a	87	58.470	ENSCLAG00000012929	MRPS18A	93	58.470	Chinchilla_lanigera
ENSELUG00000005253	mrps18a	83	61.364	ENSCSAG00000012127	MRPS18A	91	60.000	Chlorocebus_sabaeus
ENSELUG00000005253	mrps18a	78	64.242	ENSCPBG00000025243	MRPS18A	84	64.242	Chrysemys_picta_bellii
ENSELUG00000005253	mrps18a	73	37.179	ENSCING00000024771	-	77	37.179	Ciona_intestinalis
ENSELUG00000005253	mrps18a	66	38.971	ENSCSAVG00000009539	-	79	37.589	Ciona_savignyi
ENSELUG00000005253	mrps18a	83	60.795	ENSCANG00000039873	MRPS18A	89	60.795	Colobus_angolensis_palliatus
ENSELUG00000005253	mrps18a	78	61.212	ENSCGRG00001017882	Mrps18a	88	61.212	Cricetulus_griseus_chok1gshd
ENSELUG00000005253	mrps18a	78	50.000	ENSCGRG00000000079	Mrps18a	84	50.000	Cricetulus_griseus_crigri
ENSELUG00000005253	mrps18a	100	65.714	ENSCSEG00000019650	mrps18a	100	63.507	Cynoglossus_semilaevis
ENSELUG00000005253	mrps18a	100	71.429	ENSCVAG00000006511	mrps18a	100	71.429	Cyprinodon_variegatus
ENSELUG00000005253	mrps18a	100	68.720	ENSDARG00000024465	mrps18a	100	70.142	Danio_rerio
ENSELUG00000005253	mrps18a	87	60.656	ENSDNOG00000035755	MRPS18A	92	60.656	Dasypus_novemcinctus
ENSELUG00000005253	mrps18a	87	61.749	ENSDORG00000014583	Mrps18a	93	61.749	Dipodomys_ordii
ENSELUG00000005253	mrps18a	72	53.226	ENSETEG00000014171	MRPS18A	100	53.226	Echinops_telfairi
ENSELUG00000005253	mrps18a	75	63.291	ENSEASG00005003485	MRPS18A	58	63.291	Equus_asinus_asinus
ENSELUG00000005253	mrps18a	66	70.714	ENSECAG00000004870	MRPS18A	51	70.714	Equus_caballus
ENSELUG00000005253	mrps18a	78	67.273	ENSFCAG00000036031	MRPS18A	84	67.273	Felis_catus
ENSELUG00000005253	mrps18a	78	68.902	ENSFALG00000011356	MRPS18A	85	68.902	Ficedula_albicollis
ENSELUG00000005253	mrps18a	67	66.667	ENSFDAG00000012875	MRPS18A	70	66.667	Fukomys_damarensis
ENSELUG00000005253	mrps18a	100	70.952	ENSFHEG00000009014	mrps18a	100	70.952	Fundulus_heteroclitus
ENSELUG00000005253	mrps18a	100	70.476	ENSGMOG00000012493	mrps18a	100	70.476	Gadus_morhua
ENSELUG00000005253	mrps18a	55	71.053	ENSGALG00000010296	MRPS18A	81	68.644	Gallus_gallus
ENSELUG00000005253	mrps18a	100	70.476	ENSGAFG00000005211	mrps18a	100	70.476	Gambusia_affinis
ENSELUG00000005253	mrps18a	100	66.190	ENSGACG00000013370	mrps18a	100	66.190	Gasterosteus_aculeatus
ENSELUG00000005253	mrps18a	72	67.114	ENSGAGG00000017954	MRPS18A	79	67.114	Gopherus_agassizii
ENSELUG00000005253	mrps18a	85	59.444	ENSGGOG00000006303	-	91	59.444	Gorilla_gorilla
ENSELUG00000005253	mrps18a	100	72.857	ENSHBUG00000014682	mrps18a	100	72.857	Haplochromis_burtoni
ENSELUG00000005253	mrps18a	81	62.573	ENSHGLG00000014356	MRPS18A	87	62.573	Heterocephalus_glaber_female
ENSELUG00000005253	mrps18a	81	62.573	ENSHGLG00100010988	MRPS18A	87	62.573	Heterocephalus_glaber_male
ENSELUG00000005253	mrps18a	100	67.619	ENSHCOG00000000856	mrps18a	100	67.619	Hippocampus_comes
ENSELUG00000005253	mrps18a	100	71.564	ENSIPUG00000017406	mrps18a	100	72.512	Ictalurus_punctatus
ENSELUG00000005253	mrps18a	80	59.551	ENSSTOG00000004490	MRPS18A	86	59.551	Ictidomys_tridecemlineatus
ENSELUG00000005253	mrps18a	78	63.030	ENSJJAG00000006567	Mrps18a	84	63.030	Jaculus_jaculus
ENSELUG00000005253	mrps18a	100	70.000	ENSKMAG00000014910	mrps18a	100	70.000	Kryptolebias_marmoratus
ENSELUG00000005253	mrps18a	100	71.698	ENSLBEG00000003391	mrps18a	99	71.698	Labrus_bergylta
ENSELUG00000005253	mrps18a	100	50.917	ENSLACG00000022160	mrps18a	100	50.917	Latimeria_chalumnae
ENSELUG00000005253	mrps18a	100	66.190	ENSLOCG00000016008	mrps18a	100	66.190	Lepisosteus_oculatus
ENSELUG00000005253	mrps18a	80	64.458	ENSLAFG00000001168	MRPS18A	84	65.060	Loxodonta_africana
ENSELUG00000005253	mrps18a	83	61.364	ENSMFAG00000038311	MRPS18A	91	60.000	Macaca_fascicularis
ENSELUG00000005253	mrps18a	83	61.364	ENSMMUG00000014749	MRPS18A	91	60.000	Macaca_mulatta
ENSELUG00000005253	mrps18a	78	64.848	ENSMNEG00000044642	MRPS18A	84	64.848	Macaca_nemestrina
ENSELUG00000005253	mrps18a	77	64.780	ENSMLEG00000041828	MRPS18A	100	64.780	Mandrillus_leucophaeus
ENSELUG00000005253	mrps18a	100	70.000	ENSMAMG00000015478	mrps18a	100	70.000	Mastacembelus_armatus
ENSELUG00000005253	mrps18a	100	72.857	ENSMZEG00005014925	mrps18a	100	72.857	Maylandia_zebra
ENSELUG00000005253	mrps18a	78	65.244	ENSMGAG00000010915	MRPS18A	85	65.244	Meleagris_gallopavo
ENSELUG00000005253	mrps18a	85	60.000	ENSMICG00000005062	MRPS18A	91	60.000	Microcebus_murinus
ENSELUG00000005253	mrps18a	78	61.212	ENSMOCG00000015168	-	87	61.212	Microtus_ochrogaster
ENSELUG00000005253	mrps18a	78	66.061	ENSMOCG00000021207	-	84	66.061	Microtus_ochrogaster
ENSELUG00000005253	mrps18a	100	72.170	ENSMMOG00000015248	mrps18a	100	72.170	Mola_mola
ENSELUG00000005253	mrps18a	78	53.846	ENSMODG00000018952	MRPS18A	87	53.846	Monodelphis_domestica
ENSELUG00000005253	mrps18a	100	74.286	ENSMALG00000017044	mrps18a	91	74.286	Monopterus_albus
ENSELUG00000005253	mrps18a	87	60.109	MGP_CAROLIEiJ_G0021656	Mrps18a	91	62.500	Mus_caroli
ENSELUG00000005253	mrps18a	87	60.109	ENSMUSG00000023967	Mrps18a	93	60.109	Mus_musculus
ENSELUG00000005253	mrps18a	94	56.061	MGP_PahariEiJ_G0020648	Mrps18a	100	56.954	Mus_pahari
ENSELUG00000005253	mrps18a	87	60.109	MGP_SPRETEiJ_G0022568	Mrps18a	93	60.109	Mus_spretus
ENSELUG00000005253	mrps18a	78	66.061	ENSMPUG00000012868	MRPS18A	69	66.061	Mustela_putorius_furo
ENSELUG00000005253	mrps18a	78	67.073	ENSMLUG00000017755	MRPS18A	83	67.073	Myotis_lucifugus
ENSELUG00000005253	mrps18a	78	64.848	ENSNGAG00000020052	Mrps18a	85	64.848	Nannospalax_galili
ENSELUG00000005253	mrps18a	100	72.857	ENSNBRG00000021152	mrps18a	100	72.857	Neolamprologus_brichardi
ENSELUG00000005253	mrps18a	85	58.889	ENSNLEG00000003865	MRPS18A	91	58.889	Nomascus_leucogenys
ENSELUG00000005253	mrps18a	78	50.459	ENSMEUG00000013986	MRPS18A	87	50.000	Notamacropus_eugenii
ENSELUG00000005253	mrps18a	87	45.902	ENSOPRG00000007680	MRPS18A	95	45.902	Ochotona_princeps
ENSELUG00000005253	mrps18a	78	65.455	ENSODEG00000015388	MRPS18A	84	65.455	Octodon_degus
ENSELUG00000005253	mrps18a	100	72.857	ENSONIG00000000609	mrps18a	100	72.857	Oreochromis_niloticus
ENSELUG00000005253	mrps18a	76	65.823	ENSOANG00000001955	MRPS18A	99	65.823	Ornithorhynchus_anatinus
ENSELUG00000005253	mrps18a	85	58.333	ENSOCUG00000005544	MRPS18A	91	58.333	Oryctolagus_cuniculus
ENSELUG00000005253	mrps18a	100	70.952	ENSORLG00000023864	mrps18a	100	70.952	Oryzias_latipes
ENSELUG00000005253	mrps18a	100	70.952	ENSORLG00020002882	mrps18a	100	70.952	Oryzias_latipes_hni
ENSELUG00000005253	mrps18a	100	69.524	ENSORLG00015022065	mrps18a	100	69.524	Oryzias_latipes_hsok
ENSELUG00000005253	mrps18a	100	66.190	ENSOMEG00000018124	mrps18a	100	66.190	Oryzias_melastigma
ENSELUG00000005253	mrps18a	87	60.656	ENSOGAG00000026551	MRPS18A	93	60.656	Otolemur_garnettii
ENSELUG00000005253	mrps18a	85	60.556	ENSOARG00000008279	MRPS18A	91	60.556	Ovis_aries
ENSELUG00000005253	mrps18a	85	59.444	ENSPPAG00000036291	MRPS18A	91	59.444	Pan_paniscus
ENSELUG00000005253	mrps18a	78	66.667	ENSPPRG00000006429	MRPS18A	84	66.667	Panthera_pardus
ENSELUG00000005253	mrps18a	78	67.273	ENSPTIG00000001653	MRPS18A	84	67.273	Panthera_tigris_altaica
ENSELUG00000005253	mrps18a	85	59.444	ENSPTRG00000018209	MRPS18A	91	59.444	Pan_troglodytes
ENSELUG00000005253	mrps18a	83	61.364	ENSPANG00000006967	MRPS18A	91	60.000	Papio_anubis
ENSELUG00000005253	mrps18a	100	66.190	ENSPKIG00000012807	mrps18a	88	66.190	Paramormyrops_kingsleyae
ENSELUG00000005253	mrps18a	74	69.565	ENSPSIG00000013672	MRPS18A	85	62.195	Pelodiscus_sinensis
ENSELUG00000005253	mrps18a	100	60.377	ENSPMGG00000000493	mrps18a	100	60.377	Periophthalmus_magnuspinnatus
ENSELUG00000005253	mrps18a	78	65.455	ENSPEMG00000000405	Mrps18a	84	65.455	Peromyscus_maniculatus_bairdii
ENSELUG00000005253	mrps18a	88	58.919	ENSPMAG00000007012	mrps18a	100	58.919	Petromyzon_marinus
ENSELUG00000005253	mrps18a	78	64.848	ENSPCIG00000024858	MRPS18A	84	64.848	Phascolarctos_cinereus
ENSELUG00000005253	mrps18a	77	81.761	ENSPFOG00000009046	mrps18a	100	81.761	Poecilia_formosa
ENSELUG00000005253	mrps18a	100	70.952	ENSPLAG00000011106	mrps18a	100	70.952	Poecilia_latipinna
ENSELUG00000005253	mrps18a	100	70.476	ENSPMEG00000000736	mrps18a	100	70.476	Poecilia_mexicana
ENSELUG00000005253	mrps18a	100	72.381	ENSPREG00000012172	mrps18a	95	72.381	Poecilia_reticulata
ENSELUG00000005253	mrps18a	87	59.016	ENSPPYG00000017282	MRPS18A	93	59.016	Pongo_abelii
ENSELUG00000005253	mrps18a	76	50.971	ENSPCAG00000004192	MRPS18A	99	50.971	Procavia_capensis
ENSELUG00000005253	mrps18a	87	59.563	ENSPCOG00000014911	MRPS18A	93	59.563	Propithecus_coquereli
ENSELUG00000005253	mrps18a	87	61.644	ENSPVAG00000002758	MRPS18A	69	61.644	Pteropus_vampyrus
ENSELUG00000005253	mrps18a	100	73.333	ENSPNYG00000014753	mrps18a	100	73.333	Pundamilia_nyererei
ENSELUG00000005253	mrps18a	100	68.868	ENSPNAG00000023462	mrps18a	100	67.925	Pygocentrus_nattereri
ENSELUG00000005253	mrps18a	87	59.563	ENSRNOG00000019511	Mrps18a	93	59.563	Rattus_norvegicus
ENSELUG00000005253	mrps18a	82	60.694	ENSRBIG00000028789	MRPS18A	88	60.694	Rhinopithecus_bieti
ENSELUG00000005253	mrps18a	82	60.694	ENSRROG00000042368	-	88	60.694	Rhinopithecus_roxellana
ENSELUG00000005253	mrps18a	84	59.551	ENSSBOG00000019943	MRPS18A	90	59.551	Saimiri_boliviensis_boliviensis
ENSELUG00000005253	mrps18a	79	66.265	ENSSHAG00000015048	-	84	66.265	Sarcophilus_harrisii
ENSELUG00000005253	mrps18a	100	65.714	ENSSFOG00015005628	mrps18a	100	65.714	Scleropages_formosus
ENSELUG00000005253	mrps18a	100	72.381	ENSSMAG00000009353	mrps18a	100	72.381	Scophthalmus_maximus
ENSELUG00000005253	mrps18a	100	65.238	ENSSDUG00000011655	mrps18a	89	77.019	Seriola_dumerili
ENSELUG00000005253	mrps18a	100	66.667	ENSSLDG00000025435	mrps18a	100	66.667	Seriola_lalandi_dorsalis
ENSELUG00000005253	mrps18a	91	62.694	ENSSPUG00000011517	MRPS18A	100	62.694	Sphenodon_punctatus
ENSELUG00000005253	mrps18a	100	69.524	ENSSPAG00000000034	mrps18a	100	69.524	Stegastes_partitus
ENSELUG00000005253	mrps18a	79	66.265	ENSSSCG00000001692	MRPS18A	84	66.265	Sus_scrofa
ENSELUG00000005253	mrps18a	72	68.243	ENSTGUG00000008142	MRPS18A	100	68.243	Taeniopygia_guttata
ENSELUG00000005253	mrps18a	100	66.190	ENSTRUG00000025134	mrps18a	100	66.190	Takifugu_rubripes
ENSELUG00000005253	mrps18a	100	69.048	ENSTNIG00000016302	mrps18a	100	69.048	Tetraodon_nigroviridis
ENSELUG00000005253	mrps18a	78	45.982	ENSTBEG00000004094	MRPS18A	88	45.982	Tupaia_belangeri
ENSELUG00000005253	mrps18a	77	70.455	ENSTTRG00000006354	MRPS18A	64	70.455	Tursiops_truncatus
ENSELUG00000005253	mrps18a	85	61.667	ENSUAMG00000013758	MRPS18A	91	61.667	Ursus_americanus
ENSELUG00000005253	mrps18a	85	62.222	ENSUMAG00000005910	MRPS18A	91	62.222	Ursus_maritimus
ENSELUG00000005253	mrps18a	65	58.394	ENSVVUG00000022444	-	68	58.394	Vulpes_vulpes
ENSELUG00000005253	mrps18a	87	60.109	ENSVVUG00000029092	-	93	60.109	Vulpes_vulpes
ENSELUG00000005253	mrps18a	60	63.200	ENSXETG00000003270	mrps18a	82	63.200	Xenopus_tropicalis
ENSELUG00000005253	mrps18a	100	65.238	ENSXCOG00000007223	mrps18a	100	65.238	Xiphophorus_couchianus
ENSELUG00000005253	mrps18a	100	72.381	ENSXMAG00000004867	mrps18a	100	72.381	Xiphophorus_maculatus