EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000005435 (Gene tree)
Gene ID: 105018847
Gene Symbol: scrt1b
Alias: -
Full Name: transcriptional repressor scratch 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 3655 bases
Position: chrLG20:29593119-29596773
Accession: 105018847
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000004238	zf-C2H2	PF00096.26	2.5e-26	1	4
ENSELUP00000004238	zf-C2H2	PF00096.26	2.5e-26	2	4
ENSELUP00000004238	zf-C2H2	PF00096.26	2.5e-26	3	4
ENSELUP00000004238	zf-C2H2	PF00096.26	2.5e-26	4	4
ENSELUP00000004238	zf-met	PF12874.7	4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000012686	-	2862	XM_010884611	ENSELUP00000004238	280 (aa)	XP_010882913	UPI0005778CA4

Gene Model

Click here to download ENSELUG00000005435's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000005435's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000005435	scrt1b	53	35.385	ENSELUG00000001909	-	76	31.818
ENSELUG00000005435	scrt1b	50	55.396	ENSELUG00000018742	-	50	55.396
ENSELUG00000005435	scrt1b	95	39.427	ENSELUG00000021795	SNAI2	78	41.935
ENSELUG00000005435	scrt1b	50	37.762	ENSELUG00000000281	-	55	39.259
ENSELUG00000005435	scrt1b	96	66.333	ENSELUG00000023883	scrt2	95	66.333
ENSELUG00000005435	scrt1b	66	32.500	ENSELUG00000021560	-	57	38.298
ENSELUG00000005435	scrt1b	51	49.032	ENSELUG00000002056	SNAI1	74	42.857
ENSELUG00000005435	scrt1b	98	91.636	ENSELUG00000022228	scrt1a	99	91.636

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000005435	scrt1b	98	79.433	ENSAPOG00000015197	-	99	79.433	Acanthochromis_polyacanthus
ENSELUG00000005435	scrt1b	96	69.928	ENSAPOG00000003680	scrt2	96	69.928	Acanthochromis_polyacanthus
ENSELUG00000005435	scrt1b	99	88.849	ENSAPOG00000009279	scrt1b	99	88.849	Acanthochromis_polyacanthus
ENSELUG00000005435	scrt1b	99	85.305	ENSACIG00000013613	scrt1b	99	85.305	Amphilophus_citrinellus
ENSELUG00000005435	scrt1b	96	57.667	ENSACIG00000001296	-	96	58.333	Amphilophus_citrinellus
ENSELUG00000005435	scrt1b	96	69.203	ENSACIG00000012604	scrt2	96	69.203	Amphilophus_citrinellus
ENSELUG00000005435	scrt1b	98	78.378	ENSACIG00000006586	-	99	78.378	Amphilophus_citrinellus
ENSELUG00000005435	scrt1b	96	69.928	ENSAOCG00000021557	scrt2	96	69.928	Amphiprion_ocellaris
ENSELUG00000005435	scrt1b	98	78.041	ENSAOCG00000023304	-	99	78.041	Amphiprion_ocellaris
ENSELUG00000005435	scrt1b	99	88.849	ENSAOCG00000003910	scrt1b	99	88.849	Amphiprion_ocellaris
ENSELUG00000005435	scrt1b	98	78.041	ENSAPEG00000005677	-	99	78.041	Amphiprion_percula
ENSELUG00000005435	scrt1b	99	89.209	ENSAPEG00000000869	scrt1b	99	89.209	Amphiprion_percula
ENSELUG00000005435	scrt1b	96	69.928	ENSAPEG00000022558	scrt2	96	69.928	Amphiprion_percula
ENSELUG00000005435	scrt1b	99	89.928	ENSATEG00000002302	scrt1b	99	89.928	Anabas_testudineus
ENSELUG00000005435	scrt1b	96	66.019	ENSATEG00000023998	scrt2	97	66.019	Anabas_testudineus
ENSELUG00000005435	scrt1b	96	54.603	ENSATEG00000003195	-	97	54.603	Anabas_testudineus
ENSELUG00000005435	scrt1b	98	79.787	ENSATEG00000011660	-	99	79.787	Anabas_testudineus
ENSELUG00000005435	scrt1b	76	76.168	ENSACAG00000016109	SCRT2	95	76.168	Anolis_carolinensis
ENSELUG00000005435	scrt1b	99	88.129	ENSACLG00000007162	scrt1b	99	88.129	Astatotilapia_calliptera
ENSELUG00000005435	scrt1b	98	76.254	ENSACLG00000012046	-	99	76.254	Astatotilapia_calliptera
ENSELUG00000005435	scrt1b	98	84.058	ENSAMXG00000042624	SCRT1	99	84.058	Astyanax_mexicanus
ENSELUG00000005435	scrt1b	88	71.542	ENSAMXG00000034158	scrt2	92	71.542	Astyanax_mexicanus
ENSELUG00000005435	scrt1b	100	87.500	ENSAMXG00000038085	scrt1a	100	87.500	Astyanax_mexicanus
ENSELUG00000005435	scrt1b	58	62.963	WBGene00000468	ces-1	61	61.677	Caenorhabditis_elegans
ENSELUG00000005435	scrt1b	99	87.681	ENSCPBG00000018899	SCRT1	99	87.681	Chrysemys_picta_bellii
ENSELUG00000005435	scrt1b	86	61.600	ENSCPBG00000027613	SCRT2	100	61.600	Chrysemys_picta_bellii
ENSELUG00000005435	scrt1b	88	49.388	ENSCGRG00000001380	Scrt2	100	49.388	Cricetulus_griseus_crigri
ENSELUG00000005435	scrt1b	98	78.041	ENSCSEG00000014892	-	99	78.041	Cynoglossus_semilaevis
ENSELUG00000005435	scrt1b	99	87.770	ENSCSEG00000008596	scrt1b	99	87.770	Cynoglossus_semilaevis
ENSELUG00000005435	scrt1b	96	66.337	ENSCSEG00000021542	scrt2	97	66.337	Cynoglossus_semilaevis
ENSELUG00000005435	scrt1b	98	78.716	ENSCVAG00000003190	-	99	78.716	Cyprinodon_variegatus
ENSELUG00000005435	scrt1b	96	65.696	ENSCVAG00000021038	scrt2	97	65.696	Cyprinodon_variegatus
ENSELUG00000005435	scrt1b	100	88.652	ENSCVAG00000009561	scrt1b	100	88.652	Cyprinodon_variegatus
ENSELUG00000005435	scrt1b	99	90.942	ENSDARG00000100821	scrt1a	99	90.942	Danio_rerio
ENSELUG00000005435	scrt1b	98	91.636	ENSDARG00000040214	scrt1b	99	91.636	Danio_rerio
ENSELUG00000005435	scrt1b	83	70.386	ENSFALG00000005718	SCRT2	97	70.386	Ficedula_albicollis
ENSELUG00000005435	scrt1b	96	62.963	ENSFDAG00000008733	SCRT1	97	62.963	Fukomys_damarensis
ENSELUG00000005435	scrt1b	98	77.703	ENSFHEG00000009794	-	99	77.703	Fundulus_heteroclitus
ENSELUG00000005435	scrt1b	99	88.129	ENSFHEG00000014820	scrt1b	99	88.129	Fundulus_heteroclitus
ENSELUG00000005435	scrt1b	96	71.377	ENSFHEG00000005732	scrt2	96	71.377	Fundulus_heteroclitus
ENSELUG00000005435	scrt1b	56	96.721	ENSGMOG00000013833	-	54	96.721	Gadus_morhua
ENSELUG00000005435	scrt1b	98	86.643	ENSGMOG00000000629	scrt1b	99	86.643	Gadus_morhua
ENSELUG00000005435	scrt1b	100	60.188	ENSGMOG00000019519	scrt2	99	60.188	Gadus_morhua
ENSELUG00000005435	scrt1b	96	63.370	ENSGALG00000028912	SCRT2	97	63.309	Gallus_gallus
ENSELUG00000005435	scrt1b	99	88.129	ENSGAFG00000007636	scrt1b	99	88.129	Gambusia_affinis
ENSELUG00000005435	scrt1b	96	67.677	ENSGAFG00000003093	scrt2	97	67.677	Gambusia_affinis
ENSELUG00000005435	scrt1b	98	78.292	ENSGAFG00000009650	-	99	78.292	Gambusia_affinis
ENSELUG00000005435	scrt1b	98	78.767	ENSGACG00000004072	-	99	78.767	Gasterosteus_aculeatus
ENSELUG00000005435	scrt1b	98	85.870	ENSGACG00000008982	scrt1b	99	85.870	Gasterosteus_aculeatus
ENSELUG00000005435	scrt1b	65	78.689	ENSGAGG00000020760	-	71	78.689	Gopherus_agassizii
ENSELUG00000005435	scrt1b	99	88.043	ENSGAGG00000011736	SCRT1	100	88.043	Gopherus_agassizii
ENSELUG00000005435	scrt1b	96	63.406	ENSGAGG00000020761	SCRT2	96	63.406	Gopherus_agassizii
ENSELUG00000005435	scrt1b	99	88.129	ENSHBUG00000016621	scrt1b	99	88.129	Haplochromis_burtoni
ENSELUG00000005435	scrt1b	96	69.928	ENSHBUG00000012492	scrt2	96	69.928	Haplochromis_burtoni
ENSELUG00000005435	scrt1b	98	78.716	ENSHBUG00000019101	-	99	78.716	Haplochromis_burtoni
ENSELUG00000005435	scrt1b	98	72.822	ENSHCOG00000016179	-	98	72.822	Hippocampus_comes
ENSELUG00000005435	scrt1b	99	88.489	ENSHCOG00000016704	scrt1b	99	88.489	Hippocampus_comes
ENSELUG00000005435	scrt1b	96	66.212	ENSHCOG00000008116	scrt2	97	66.212	Hippocampus_comes
ENSELUG00000005435	scrt1b	98	79.197	ENSIPUG00000005547	-	99	79.197	Ictalurus_punctatus
ENSELUG00000005435	scrt1b	99	86.738	ENSIPUG00000004551	scrt1a	99	86.738	Ictalurus_punctatus
ENSELUG00000005435	scrt1b	50	84.397	ENSSTOG00000032944	SCRT2	82	81.046	Ictidomys_tridecemlineatus
ENSELUG00000005435	scrt1b	98	76.094	ENSKMAG00000009489	-	99	77.778	Kryptolebias_marmoratus
ENSELUG00000005435	scrt1b	96	66.019	ENSKMAG00000018087	scrt2	97	66.019	Kryptolebias_marmoratus
ENSELUG00000005435	scrt1b	99	88.129	ENSKMAG00000005484	scrt1b	99	88.129	Kryptolebias_marmoratus
ENSELUG00000005435	scrt1b	98	76.271	ENSLBEG00000023388	-	99	76.949	Labrus_bergylta
ENSELUG00000005435	scrt1b	96	65.161	ENSLBEG00000015419	scrt2	97	65.161	Labrus_bergylta
ENSELUG00000005435	scrt1b	100	88.571	ENSLACG00000003588	SCRT1	99	88.571	Latimeria_chalumnae
ENSELUG00000005435	scrt1b	100	93.571	ENSLOCG00000007573	scrt1b	100	93.571	Lepisosteus_oculatus
ENSELUG00000005435	scrt1b	96	55.016	ENSLOCG00000002246	scrt2	97	55.016	Lepisosteus_oculatus
ENSELUG00000005435	scrt1b	96	92.593	ENSMFAG00000035496	SCRT1	95	56.679	Macaca_fascicularis
ENSELUG00000005435	scrt1b	99	88.489	ENSMAMG00000011698	scrt1b	99	88.489	Mastacembelus_armatus
ENSELUG00000005435	scrt1b	96	65.696	ENSMAMG00000001291	scrt2	97	65.696	Mastacembelus_armatus
ENSELUG00000005435	scrt1b	98	78.716	ENSMZEG00005026702	-	99	78.716	Maylandia_zebra
ENSELUG00000005435	scrt1b	96	69.928	ENSMZEG00005026445	scrt2	96	69.928	Maylandia_zebra
ENSELUG00000005435	scrt1b	99	88.129	ENSMZEG00005005627	scrt1b	99	88.129	Maylandia_zebra
ENSELUG00000005435	scrt1b	83	68.534	ENSMGAG00000016579	SCRT2	97	68.966	Meleagris_gallopavo
ENSELUG00000005435	scrt1b	99	87.050	ENSMMOG00000003327	scrt1b	99	87.050	Mola_mola
ENSELUG00000005435	scrt1b	96	66.340	ENSMMOG00000009272	scrt2	97	66.993	Mola_mola
ENSELUG00000005435	scrt1b	98	78.378	ENSMMOG00000018345	-	99	78.378	Mola_mola
ENSELUG00000005435	scrt1b	99	88.849	ENSMALG00000012704	scrt1b	99	88.849	Monopterus_albus
ENSELUG00000005435	scrt1b	96	68.705	ENSMALG00000013656	scrt2	96	68.705	Monopterus_albus
ENSELUG00000005435	scrt1b	53	81.633	ENSNGAG00000020815	Scrt2	74	80.263	Nannospalax_galili
ENSELUG00000005435	scrt1b	96	69.565	ENSNBRG00000007221	scrt2	96	69.565	Neolamprologus_brichardi
ENSELUG00000005435	scrt1b	98	78.378	ENSNBRG00000014882	-	99	78.378	Neolamprologus_brichardi
ENSELUG00000005435	scrt1b	99	84.532	ENSNBRG00000013983	scrt1b	99	84.532	Neolamprologus_brichardi
ENSELUG00000005435	scrt1b	96	74.183	ENSONIG00000019809	-	100	74.183	Oreochromis_niloticus
ENSELUG00000005435	scrt1b	96	62.319	ENSONIG00000003152	-	96	62.319	Oreochromis_niloticus
ENSELUG00000005435	scrt1b	99	87.770	ENSONIG00000006007	scrt1b	99	87.770	Oreochromis_niloticus
ENSELUG00000005435	scrt1b	96	65.696	ENSONIG00000016758	scrt2	97	65.696	Oreochromis_niloticus
ENSELUG00000005435	scrt1b	98	76.094	ENSORLG00000022825	-	98	76.094	Oryzias_latipes
ENSELUG00000005435	scrt1b	96	66.343	ENSORLG00000024051	scrt2	97	66.343	Oryzias_latipes
ENSELUG00000005435	scrt1b	99	88.849	ENSORLG00000025651	scrt1b	99	88.849	Oryzias_latipes
ENSELUG00000005435	scrt1b	96	66.343	ENSORLG00020011478	scrt2	97	66.343	Oryzias_latipes_hni
ENSELUG00000005435	scrt1b	99	88.849	ENSORLG00020012967	scrt1b	99	88.849	Oryzias_latipes_hni
ENSELUG00000005435	scrt1b	99	88.849	ENSORLG00015019165	scrt1b	99	88.849	Oryzias_latipes_hsok
ENSELUG00000005435	scrt1b	98	76.094	ENSORLG00015010104	-	98	76.094	Oryzias_latipes_hsok
ENSELUG00000005435	scrt1b	96	66.343	ENSORLG00015005524	scrt2	97	66.343	Oryzias_latipes_hsok
ENSELUG00000005435	scrt1b	98	78.644	ENSOMEG00000000286	-	99	78.644	Oryzias_melastigma
ENSELUG00000005435	scrt1b	96	66.667	ENSOMEG00000002661	scrt2	97	66.667	Oryzias_melastigma
ENSELUG00000005435	scrt1b	99	88.849	ENSOMEG00000003925	scrt1b	99	88.849	Oryzias_melastigma
ENSELUG00000005435	scrt1b	100	92.143	ENSPKIG00000020085	scrt1a	100	92.143	Paramormyrops_kingsleyae
ENSELUG00000005435	scrt1b	100	90.714	ENSPKIG00000022303	SCRT1	100	90.714	Paramormyrops_kingsleyae
ENSELUG00000005435	scrt1b	98	79.381	ENSPMGG00000021402	-	99	79.381	Periophthalmus_magnuspinnatus
ENSELUG00000005435	scrt1b	96	72.826	ENSPMGG00000016561	scrt2	96	72.826	Periophthalmus_magnuspinnatus
ENSELUG00000005435	scrt1b	99	85.560	ENSPMGG00000002260	scrt1b	99	85.560	Periophthalmus_magnuspinnatus
ENSELUG00000005435	scrt1b	98	77.966	ENSPFOG00000005616	-	99	77.966	Poecilia_formosa
ENSELUG00000005435	scrt1b	96	66.019	ENSPFOG00000007738	scrt2	97	66.019	Poecilia_formosa
ENSELUG00000005435	scrt1b	99	88.129	ENSPFOG00000017719	scrt1b	99	88.129	Poecilia_formosa
ENSELUG00000005435	scrt1b	98	77.966	ENSPLAG00000011718	-	99	77.966	Poecilia_latipinna
ENSELUG00000005435	scrt1b	96	71.480	ENSPLAG00000005765	scrt2	96	71.480	Poecilia_latipinna
ENSELUG00000005435	scrt1b	99	88.129	ENSPLAG00000009876	scrt1b	99	88.129	Poecilia_latipinna
ENSELUG00000005435	scrt1b	96	71.480	ENSPMEG00000001538	scrt2	96	71.480	Poecilia_mexicana
ENSELUG00000005435	scrt1b	98	77.966	ENSPMEG00000011706	-	99	77.966	Poecilia_mexicana
ENSELUG00000005435	scrt1b	99	88.129	ENSPMEG00000013274	scrt1b	99	88.129	Poecilia_mexicana
ENSELUG00000005435	scrt1b	98	77.288	ENSPREG00000012166	-	99	77.288	Poecilia_reticulata
ENSELUG00000005435	scrt1b	96	66.019	ENSPREG00000001147	scrt2	97	66.019	Poecilia_reticulata
ENSELUG00000005435	scrt1b	99	88.129	ENSPREG00000018985	scrt1b	99	88.129	Poecilia_reticulata
ENSELUG00000005435	scrt1b	98	78.716	ENSPNYG00000008865	-	99	78.716	Pundamilia_nyererei
ENSELUG00000005435	scrt1b	96	69.928	ENSPNYG00000013109	scrt2	96	69.928	Pundamilia_nyererei
ENSELUG00000005435	scrt1b	99	88.129	ENSPNYG00000017733	scrt1b	99	88.129	Pundamilia_nyererei
ENSELUG00000005435	scrt1b	100	88.214	ENSPNAG00000017415	scrt1a	100	88.214	Pygocentrus_nattereri
ENSELUG00000005435	scrt1b	98	85.091	ENSPNAG00000027880	-	99	85.091	Pygocentrus_nattereri
ENSELUG00000005435	scrt1b	100	88.571	ENSSFOG00015001195	SCRT1	100	88.571	Scleropages_formosus
ENSELUG00000005435	scrt1b	99	88.129	ENSSMAG00000019207	scrt1b	99	88.129	Scophthalmus_maximus
ENSELUG00000005435	scrt1b	98	76.510	ENSSMAG00000005122	-	99	76.510	Scophthalmus_maximus
ENSELUG00000005435	scrt1b	98	67.003	ENSSDUG00000001637	scrt2	96	67.003	Seriola_dumerili
ENSELUG00000005435	scrt1b	98	78.716	ENSSDUG00000013215	-	99	78.716	Seriola_dumerili
ENSELUG00000005435	scrt1b	99	88.489	ENSSDUG00000007752	scrt1b	99	88.489	Seriola_dumerili
ENSELUG00000005435	scrt1b	98	78.716	ENSSLDG00000016454	-	99	78.716	Seriola_lalandi_dorsalis
ENSELUG00000005435	scrt1b	96	66.343	ENSSLDG00000013565	scrt2	97	66.343	Seriola_lalandi_dorsalis
ENSELUG00000005435	scrt1b	99	88.489	ENSSLDG00000017166	scrt1b	99	88.489	Seriola_lalandi_dorsalis
ENSELUG00000005435	scrt1b	96	66.421	ENSSPUG00000018637	SCRT2	97	66.421	Sphenodon_punctatus
ENSELUG00000005435	scrt1b	99	88.489	ENSSPAG00000002200	scrt1b	99	88.489	Stegastes_partitus
ENSELUG00000005435	scrt1b	98	77.027	ENSSPAG00000006788	-	99	78.716	Stegastes_partitus
ENSELUG00000005435	scrt1b	96	70.290	ENSSPAG00000014018	scrt2	96	70.290	Stegastes_partitus
ENSELUG00000005435	scrt1b	83	70.259	ENSTGUG00000006801	SCRT2	99	70.259	Taeniopygia_guttata
ENSELUG00000005435	scrt1b	85	78.423	ENSTRUG00000019558	-	80	78.423	Takifugu_rubripes
ENSELUG00000005435	scrt1b	98	77.627	ENSTRUG00000012719	-	99	77.627	Takifugu_rubripes
ENSELUG00000005435	scrt1b	96	68.385	ENSTRUG00000007620	scrt2	97	68.385	Takifugu_rubripes
ENSELUG00000005435	scrt1b	98	86.232	ENSTRUG00000011637	scrt1b	99	86.232	Takifugu_rubripes
ENSELUG00000005435	scrt1b	99	85.612	ENSTNIG00000018384	scrt1b	99	85.612	Tetraodon_nigroviridis
ENSELUG00000005435	scrt1b	96	71.685	ENSTNIG00000012473	scrt2	97	71.685	Tetraodon_nigroviridis
ENSELUG00000005435	scrt1b	99	87.770	ENSXCOG00000019675	scrt1b	99	87.770	Xiphophorus_couchianus
ENSELUG00000005435	scrt1b	96	68.013	ENSXCOG00000014367	scrt2	97	68.013	Xiphophorus_couchianus
ENSELUG00000005435	scrt1b	98	77.580	ENSXCOG00000019861	-	99	77.580	Xiphophorus_couchianus
ENSELUG00000005435	scrt1b	98	78.305	ENSXMAG00000015353	-	99	78.305	Xiphophorus_maculatus
ENSELUG00000005435	scrt1b	99	87.770	ENSXMAG00000027885	scrt1b	99	87.770	Xiphophorus_maculatus
ENSELUG00000005435	scrt1b	96	66.343	ENSXMAG00000028567	scrt2	97	66.343	Xiphophorus_maculatus