EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000005470 (Gene tree)
Gene ID: 105016467
Gene Symbol: -
Alias: -
Full Name: probable ribonuclease ZC3H12C
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 9315 bases
Position: chrLG16:23785717-23795031
Accession: 105016467
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000028760	RNase_Zc3h12a	PF11977.8	2.3e-64	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000012569	-	7626	XM_010880337	ENSELUP00000028760	896 (aa)	XP_010878639	UPI0005772557

Gene Model

Click here to download ENSELUG00000005470's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000005470's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000005470	-	87	53.117	ENSELUG00000009319	-	60	62.526

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000005470	-	72	54.944	ENSAPOG00000015355	-	53	64.386	Acanthochromis_polyacanthus
ENSELUG00000005470	-	94	60.819	ENSAPOG00000001632	-	88	70.738	Acanthochromis_polyacanthus
ENSELUG00000005470	-	78	68.627	ENSACIG00000001362	-	78	62.295	Amphilophus_citrinellus
ENSELUG00000005470	-	100	48.294	ENSAOCG00000003866	-	96	72.137	Amphiprion_ocellaris
ENSELUG00000005470	-	100	48.091	ENSAPEG00000005727	-	96	58.235	Amphiprion_percula
ENSELUG00000005470	-	74	51.009	ENSAPEG00000018582	-	100	50.445	Amphiprion_percula
ENSELUG00000005470	-	99	56.852	ENSATEG00000002260	-	94	77.037	Anabas_testudineus
ENSELUG00000005470	-	99	54.915	ENSACLG00000018493	-	99	53.904	Astatotilapia_calliptera
ENSELUG00000005470	-	100	47.852	ENSACLG00000027924	-	83	50.711	Astatotilapia_calliptera
ENSELUG00000005470	-	86	47.101	ENSCSEG00000010073	-	91	70.896	Cynoglossus_semilaevis
ENSELUG00000005470	-	99	54.671	ENSCSEG00000008542	-	99	52.306	Cynoglossus_semilaevis
ENSELUG00000005470	-	86	50.000	ENSFHEG00000021225	-	85	68.354	Fundulus_heteroclitus
ENSELUG00000005470	-	74	54.805	ENSGMOG00000017975	-	100	54.054	Gadus_morhua
ENSELUG00000005470	-	100	46.531	ENSGAFG00000005290	-	65	53.698	Gambusia_affinis
ENSELUG00000005470	-	74	54.449	ENSGACG00000001339	-	99	53.092	Gasterosteus_aculeatus
ENSELUG00000005470	-	74	50.581	ENSGACG00000014201	-	58	67.039	Gasterosteus_aculeatus
ENSELUG00000005470	-	100	47.852	ENSHBUG00000006831	-	83	50.592	Haplochromis_burtoni
ENSELUG00000005470	-	100	45.340	ENSHCOG00000008878	-	68	58.824	Hippocampus_comes
ENSELUG00000005470	-	100	47.897	ENSKMAG00000011694	-	100	46.817	Kryptolebias_marmoratus
ENSELUG00000005470	-	99	55.941	ENSLBEG00000012710	-	99	54.815	Labrus_bergylta
ENSELUG00000005470	-	85	52.091	ENSLBEG00000012554	-	86	66.234	Labrus_bergylta
ENSELUG00000005470	-	95	52.257	ENSLBEG00000003547	-	50	63.158	Labrus_bergylta
ENSELUG00000005470	-	90	57.329	ENSMAMG00000021794	-	96	71.053	Mastacembelus_armatus
ENSELUG00000005470	-	99	56.146	ENSMAMG00000020372	-	99	54.774	Mastacembelus_armatus
ENSELUG00000005470	-	100	47.473	ENSMZEG00005007718	-	83	50.118	Maylandia_zebra
ENSELUG00000005470	-	99	54.478	ENSMZEG00005019137	-	90	73.077	Maylandia_zebra
ENSELUG00000005470	-	88	50.610	ENSMMOG00000005728	-	89	62.821	Mola_mola
ENSELUG00000005470	-	99	54.682	ENSMMOG00000019526	-	81	57.125	Mola_mola
ENSELUG00000005470	-	90	72.727	ENSMALG00000010501	-	51	72.727	Monopterus_albus
ENSELUG00000005470	-	99	53.518	ENSNBRG00000012175	-	90	72.436	Neolamprologus_brichardi
ENSELUG00000005470	-	100	48.152	ENSNBRG00000006978	-	83	50.474	Neolamprologus_brichardi
ENSELUG00000005470	-	100	48.004	ENSONIG00000012268	-	100	51.311	Oreochromis_niloticus
ENSELUG00000005470	-	100	45.671	ENSORLG00000029243	-	57	65.612	Oryzias_latipes
ENSELUG00000005470	-	86	52.798	ENSORLG00020017005	-	65	56.981	Oryzias_latipes_hni
ENSELUG00000005470	-	86	52.433	ENSORLG00015015211	-	65	55.323	Oryzias_latipes_hsok
ENSELUG00000005470	-	100	47.672	ENSOMEG00000006666	-	66	55.520	Oryzias_melastigma
ENSELUG00000005470	-	53	54.436	ENSPPRG00000014359	ZC3H12A	64	53.717	Panthera_pardus
ENSELUG00000005470	-	56	42.286	ENSPKIG00000019720	-	80	49.012	Paramormyrops_kingsleyae
ENSELUG00000005470	-	67	63.561	ENSPMGG00000020126	-	59	63.656	Periophthalmus_magnuspinnatus
ENSELUG00000005470	-	100	45.812	ENSPLAG00000009867	-	64	54.823	Poecilia_latipinna
ENSELUG00000005470	-	99	50.947	ENSPMEG00000011676	-	84	53.325	Poecilia_mexicana
ENSELUG00000005470	-	100	46.091	ENSPMEG00000006624	-	65	54.545	Poecilia_mexicana
ENSELUG00000005470	-	100	45.998	ENSPREG00000010838	-	65	55.395	Poecilia_reticulata
ENSELUG00000005470	-	98	50.269	ENSPREG00000001607	-	76	80.085	Poecilia_reticulata
ENSELUG00000005470	-	90	63.636	ENSSMAG00000007545	-	51	63.043	Scophthalmus_maximus
ENSELUG00000005470	-	99	56.535	ENSSMAG00000007258	-	99	56.348	Scophthalmus_maximus
ENSELUG00000005470	-	99	57.339	ENSSDUG00000013237	-	90	71.053	Seriola_dumerili
ENSELUG00000005470	-	100	48.242	ENSSDUG00000021864	-	75	65.696	Seriola_dumerili
ENSELUG00000005470	-	99	58.161	ENSSLDG00000004886	-	99	57.531	Seriola_lalandi_dorsalis
ENSELUG00000005470	-	100	48.145	ENSSLDG00000012268	-	51	63.566	Seriola_lalandi_dorsalis
ENSELUG00000005470	-	99	57.917	ENSSPAG00000001850	-	99	57.447	Stegastes_partitus
ENSELUG00000005470	-	99	46.607	ENSTRUG00000022519	-	85	50.587	Takifugu_rubripes
ENSELUG00000005470	-	75	51.674	ENSTNIG00000014519	-	94	72.510	Tetraodon_nigroviridis
ENSELUG00000005470	-	99	52.582	ENSXMAG00000014715	-	83	83.550	Xiphophorus_maculatus
ENSELUG00000005470	-	100	46.279	ENSXMAG00000027171	-	65	54.545	Xiphophorus_maculatus