EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000005486 (Gene tree)
Gene ID: 105029571
Gene Symbol: htatsf1
Alias: zgc:66252
Full Name: HIV-1 Tat specific factor 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 6550 bases
Position: chrLG07:4619859-4626408
Accession: 105029571
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000028779	RRM_1	PF00076.22	1.9e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000012548	-	3936	XM_010902999	ENSELUP00000028779	501 (aa)	XP_010901301	UPI00057804EF

Gene Model

Click here to download ENSELUG00000005486's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000005486's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000005486	htatsf1	84	58.782	ENSG00000102241	HTATSF1	98	56.746	Homo_sapiens
ENSELUG00000005486	htatsf1	90	66.309	ENSAPOG00000009823	htatsf1	99	64.425	Acanthochromis_polyacanthus
ENSELUG00000005486	htatsf1	90	64.378	ENSACIG00000020459	htatsf1	99	63.656	Amphilophus_citrinellus
ENSELUG00000005486	htatsf1	90	65.739	ENSAOCG00000020994	htatsf1	99	64.163	Amphiprion_ocellaris
ENSELUG00000005486	htatsf1	90	65.953	ENSAPEG00000016432	htatsf1	99	63.519	Amphiprion_percula
ENSELUG00000005486	htatsf1	76	71.756	ENSATEG00000008903	htatsf1	94	64.319	Anabas_testudineus
ENSELUG00000005486	htatsf1	68	68.421	ENSAPLG00000012401	HTATSF1	99	59.905	Anas_platyrhynchos
ENSELUG00000005486	htatsf1	78	59.391	ENSACAG00000009346	HTATSF1	99	56.618	Anolis_carolinensis
ENSELUG00000005486	htatsf1	90	64.103	ENSACLG00000008096	htatsf1	100	62.420	Astatotilapia_calliptera
ENSELUG00000005486	htatsf1	90	66.314	ENSAMXG00000008387	htatsf1	99	64.905	Astyanax_mexicanus
ENSELUG00000005486	htatsf1	74	61.804	ENSBTAG00000032711	HTATSF1	50	60.372	Bos_taurus
ENSELUG00000005486	htatsf1	67	39.429	WBGene00022025	Y65B4A.1	76	37.822	Caenorhabditis_elegans
ENSELUG00000005486	htatsf1	70	61.389	ENSCCAG00000025329	-	54	60.052	Cebus_capucinus
ENSELUG00000005486	htatsf1	92	59.871	ENSCPBG00000026092	HTATSF1	99	58.710	Chrysemys_picta_bellii
ENSELUG00000005486	htatsf1	75	48.295	ENSCING00000005914	-	82	48.011	Ciona_intestinalis
ENSELUG00000005486	htatsf1	75	46.023	ENSCSAVG00000000371	-	87	45.739	Ciona_savignyi
ENSELUG00000005486	htatsf1	90	65.236	ENSCVAG00000014070	htatsf1	98	63.871	Cyprinodon_variegatus
ENSELUG00000005486	htatsf1	90	65.284	ENSDARG00000056649	htatsf1	100	64.488	Danio_rerio
ENSELUG00000005486	htatsf1	68	44.000	FBgn0037081	barc	62	44.286	Drosophila_melanogaster
ENSELUG00000005486	htatsf1	91	48.447	ENSEBUG00000001534	htatsf1	83	50.467	Eptatretus_burgeri
ENSELUG00000005486	htatsf1	74	66.048	ENSFALG00000003728	HTATSF1	83	64.362	Ficedula_albicollis
ENSELUG00000005486	htatsf1	90	64.592	ENSFHEG00000020286	htatsf1	100	62.661	Fundulus_heteroclitus
ENSELUG00000005486	htatsf1	71	74.930	ENSGMOG00000016444	htatsf1	100	72.905	Gadus_morhua
ENSELUG00000005486	htatsf1	75	67.105	ENSGALG00000006410	HTATSF1	99	59.170	Gallus_gallus
ENSELUG00000005486	htatsf1	90	63.169	ENSGAFG00000003041	htatsf1	98	61.456	Gambusia_affinis
ENSELUG00000005486	htatsf1	90	64.208	ENSGACG00000020459	htatsf1	99	63.537	Gasterosteus_aculeatus
ENSELUG00000005486	htatsf1	90	64.744	ENSHBUG00000004392	htatsf1	99	62.553	Haplochromis_burtoni
ENSELUG00000005486	htatsf1	84	58.352	ENSHGLG00000005328	HTATSF1	54	57.208	Heterocephalus_glaber_female
ENSELUG00000005486	htatsf1	89	61.538	ENSHCOG00000009056	htatsf1	99	60.793	Hippocampus_comes
ENSELUG00000005486	htatsf1	90	64.530	ENSIPUG00000017828	htatsf1	99	62.796	Ictalurus_punctatus
ENSELUG00000005486	htatsf1	84	59.579	ENSSTOG00000012505	HTATSF1	50	62.240	Ictidomys_tridecemlineatus
ENSELUG00000005486	htatsf1	90	65.517	ENSKMAG00000007622	htatsf1	99	64.655	Kryptolebias_marmoratus
ENSELUG00000005486	htatsf1	90	63.853	ENSLBEG00000001154	htatsf1	99	62.690	Labrus_bergylta
ENSELUG00000005486	htatsf1	90	59.259	ENSLACG00000015989	HTATSF1	99	57.391	Latimeria_chalumnae
ENSELUG00000005486	htatsf1	89	47.548	ENSLOCG00000015118	htatsf1	99	45.378	Lepisosteus_oculatus
ENSELUG00000005486	htatsf1	73	64.894	ENSLAFG00000014307	HTATSF1	54	62.402	Loxodonta_africana
ENSELUG00000005486	htatsf1	84	58.796	ENSMNEG00000024084	HTATSF1	54	61.842	Macaca_nemestrina
ENSELUG00000005486	htatsf1	80	69.100	ENSMAMG00000021225	htatsf1	99	63.283	Mastacembelus_armatus
ENSELUG00000005486	htatsf1	90	64.316	ENSMZEG00005000485	htatsf1	99	62.766	Maylandia_zebra
ENSELUG00000005486	htatsf1	86	61.468	ENSMGAG00000003558	HTATSF1	99	60.000	Meleagris_gallopavo
ENSELUG00000005486	htatsf1	90	67.026	ENSMMOG00000011013	htatsf1	99	63.913	Mola_mola
ENSELUG00000005486	htatsf1	90	60.879	ENSMODG00000014087	-	97	59.823	Monodelphis_domestica
ENSELUG00000005486	htatsf1	90	64.807	ENSMALG00000019977	htatsf1	99	62.581	Monopterus_albus
ENSELUG00000005486	htatsf1	84	57.512	ENSMLUG00000009234	-	56	55.787	Myotis_lucifugus
ENSELUG00000005486	htatsf1	70	63.764	ENSNGAG00000017831	Htatsf1	50	63.271	Nannospalax_galili
ENSELUG00000005486	htatsf1	90	64.530	ENSNBRG00000003818	htatsf1	99	62.766	Neolamprologus_brichardi
ENSELUG00000005486	htatsf1	74	68.966	ENSMEUG00000004133	-	89	67.989	Notamacropus_eugenii
ENSELUG00000005486	htatsf1	90	64.957	ENSONIG00000008638	htatsf1	99	62.979	Oreochromis_niloticus
ENSELUG00000005486	htatsf1	82	61.882	ENSOANG00000011674	-	98	59.906	Ornithorhynchus_anatinus
ENSELUG00000005486	htatsf1	90	62.395	ENSORLG00000002356	htatsf1	99	61.422	Oryzias_latipes
ENSELUG00000005486	htatsf1	90	63.136	ENSORLG00020017818	htatsf1	97	61.422	Oryzias_latipes_hni
ENSELUG00000005486	htatsf1	90	61.635	ENSORLG00015002268	htatsf1	99	61.373	Oryzias_latipes_hsok
ENSELUG00000005486	htatsf1	91	63.057	ENSOMEG00000007564	htatsf1	99	61.422	Oryzias_melastigma
ENSELUG00000005486	htatsf1	90	68.352	ENSPKIG00000024852	htatsf1	100	65.784	Paramormyrops_kingsleyae
ENSELUG00000005486	htatsf1	71	62.360	ENSPSIG00000010192	HTATSF1	91	64.024	Pelodiscus_sinensis
ENSELUG00000005486	htatsf1	90	62.446	ENSPMGG00000006172	htatsf1	99	61.290	Periophthalmus_magnuspinnatus
ENSELUG00000005486	htatsf1	84	61.276	ENSPCIG00000030173	-	97	59.817	Phascolarctos_cinereus
ENSELUG00000005486	htatsf1	84	57.373	ENSPCIG00000018896	-	99	54.945	Phascolarctos_cinereus
ENSELUG00000005486	htatsf1	90	65.096	ENSPFOG00000007871	htatsf1	97	62.741	Poecilia_formosa
ENSELUG00000005486	htatsf1	90	65.106	ENSPLAG00000007532	htatsf1	100	62.876	Poecilia_latipinna
ENSELUG00000005486	htatsf1	90	65.236	ENSPMEG00000000352	htatsf1	100	62.876	Poecilia_mexicana
ENSELUG00000005486	htatsf1	90	65.953	ENSPREG00000007811	htatsf1	100	63.948	Poecilia_reticulata
ENSELUG00000005486	htatsf1	84	53.991	ENSPCAG00000010576	HTATSF1	57	52.194	Procavia_capensis
ENSELUG00000005486	htatsf1	85	58.391	ENSPVAG00000010281	HTATSF1	59	56.322	Pteropus_vampyrus
ENSELUG00000005486	htatsf1	90	64.316	ENSPNYG00000016693	htatsf1	99	62.766	Pundamilia_nyererei
ENSELUG00000005486	htatsf1	90	66.519	ENSPNAG00000006166	htatsf1	99	66.519	Pygocentrus_nattereri
ENSELUG00000005486	htatsf1	89	60.129	ENSSHAG00000018908	-	97	58.747	Sarcophilus_harrisii
ENSELUG00000005486	htatsf1	73	67.391	ENSSHAG00000006440	-	94	65.489	Sarcophilus_harrisii
ENSELUG00000005486	htatsf1	90	62.994	ENSSFOG00015012002	htatsf1	100	62.553	Scleropages_formosus
ENSELUG00000005486	htatsf1	90	63.368	ENSSMAG00000002970	htatsf1	99	61.905	Scophthalmus_maximus
ENSELUG00000005486	htatsf1	90	63.011	ENSSDUG00000020002	htatsf1	99	60.776	Seriola_dumerili
ENSELUG00000005486	htatsf1	90	66.379	ENSSLDG00000016880	htatsf1	99	64.363	Seriola_lalandi_dorsalis
ENSELUG00000005486	htatsf1	73	59.788	ENSSARG00000005193	HTATSF1	51	58.466	Sorex_araneus
ENSELUG00000005486	htatsf1	90	61.656	ENSSPUG00000014767	HTATSF1	98	59.825	Sphenodon_punctatus
ENSELUG00000005486	htatsf1	90	64.224	ENSSPAG00000000732	htatsf1	99	62.661	Stegastes_partitus
ENSELUG00000005486	htatsf1	70	63.712	ENSSSCG00000023062	HTATSF1	66	56.170	Sus_scrofa
ENSELUG00000005486	htatsf1	75	65.526	ENSTGUG00000002099	HTATSF1	99	57.205	Taeniopygia_guttata
ENSELUG00000005486	htatsf1	90	64.224	ENSTRUG00000013383	htatsf1	99	62.203	Takifugu_rubripes
ENSELUG00000005486	htatsf1	90	64.946	ENSTNIG00000016140	htatsf1	99	62.500	Tetraodon_nigroviridis
ENSELUG00000005486	htatsf1	68	62.751	ENSTTRG00000002269	HTATSF1	58	60.563	Tursiops_truncatus
ENSELUG00000005486	htatsf1	90	59.653	ENSXETG00000019749	htatsf1	85	58.134	Xenopus_tropicalis
ENSELUG00000005486	htatsf1	84	68.646	ENSXCOG00000006912	htatsf1	96	66.351	Xiphophorus_couchianus
ENSELUG00000005486	htatsf1	90	67.102	ENSXMAG00000000490	htatsf1	100	64.847	Xiphophorus_maculatus