EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000005586 (Gene tree)
Gene ID: 105030133
Gene Symbol: sf3b2
Alias: fb53c07|wu:fb53c07|wu:fb93b08|zgc:136773
Full Name: splicing factor 3B subunit 2
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 58441 bases
Position: chrLG24:5413209-5471649
Accession: 105030126
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000004337	DUF382	PF04037.13	2.4e-58	1	1
ENSELUP00000004341	DUF382	PF04037.13	2.6e-58	1	1
ENSELUP00000028809	DUF382	PF04037.13	3e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000012643	-	2559	XM_013131690	ENSELUP00000028736	852 (aa)	XP_012987144	-
ENSELUT00000012512	-	2505	-	ENSELUP00000004341	834 (aa)	-	-
ENSELUT00000012528	-	2367	-	ENSELUP00000004337	788 (aa)	-	-
ENSELUT00000012486	-	2736	XM_013131687	ENSELUP00000028809	911 (aa)	XP_012987141	-
ENSELUT00000012612	-	2172	-	ENSELUP00000004278	723 (aa)	-	-

Gene Model

Click here to download ENSELUG00000005586's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000005586's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000005586	sf3b2	86	71.499	ENSG00000087365	SF3B2	99	89.873	Homo_sapiens
ENSELUG00000005586	sf3b2	97	80.290	ENSAPOG00000001974	sf3b2	96	79.619	Acanthochromis_polyacanthus
ENSELUG00000005586	sf3b2	86	71.801	ENSAMEG00000017206	SF3B2	97	66.775	Ailuropoda_melanoleuca
ENSELUG00000005586	sf3b2	100	76.522	ENSACIG00000000624	sf3b2	100	76.304	Amphilophus_citrinellus
ENSELUG00000005586	sf3b2	100	80.000	ENSAOCG00000009207	sf3b2	100	80.217	Amphiprion_ocellaris
ENSELUG00000005586	sf3b2	100	80.522	ENSAPEG00000002762	sf3b2	97	80.196	Amphiprion_percula
ENSELUG00000005586	sf3b2	97	56.216	ENSACAG00000008615	SF3B2	87	57.962	Anolis_carolinensis
ENSELUG00000005586	sf3b2	86	71.945	ENSANAG00000029120	SF3B2	97	67.068	Aotus_nancymaae
ENSELUG00000005586	sf3b2	100	78.672	ENSACLG00000014771	sf3b2	100	78.564	Astatotilapia_calliptera
ENSELUG00000005586	sf3b2	100	75.858	ENSAMXG00000007929	sf3b2	96	81.406	Astyanax_mexicanus
ENSELUG00000005586	sf3b2	86	72.050	ENSBTAG00000002778	SF3B2	97	66.775	Bos_taurus
ENSELUG00000005586	sf3b2	68	46.794	WBGene00021004	sftb-2	89	50.184	Caenorhabditis_elegans
ENSELUG00000005586	sf3b2	86	72.070	ENSCJAG00000001656	SF3B2	97	67.177	Callithrix_jacchus
ENSELUG00000005586	sf3b2	86	71.925	ENSCAFG00000013033	SF3B2	97	66.848	Canis_familiaris
ENSELUG00000005586	sf3b2	86	71.925	ENSCAFG00020015382	SF3B2	97	66.848	Canis_lupus_dingo
ENSELUG00000005586	sf3b2	86	72.050	ENSCHIG00000011211	SF3B2	97	66.848	Capra_hircus
ENSELUG00000005586	sf3b2	97	67.982	ENSTSYG00000000959	SF3B2	97	67.068	Carlito_syrichta
ENSELUG00000005586	sf3b2	52	63.221	ENSCAPG00000006065	SF3B2	86	94.068	Cavia_aperea
ENSELUG00000005586	sf3b2	77	68.333	ENSCPOG00000008294	SF3B2	96	63.812	Cavia_porcellus
ENSELUG00000005586	sf3b2	86	72.070	ENSCCAG00000035256	SF3B2	97	67.177	Cebus_capucinus
ENSELUG00000005586	sf3b2	86	71.499	ENSCATG00000042240	SF3B2	97	66.848	Cercocebus_atys
ENSELUG00000005586	sf3b2	84	72.520	ENSCLAG00000016852	SF3B2	97	65.649	Chinchilla_lanigera
ENSELUG00000005586	sf3b2	86	71.499	ENSCSAG00000008121	SF3B2	97	66.848	Chlorocebus_sabaeus
ENSELUG00000005586	sf3b2	82	83.500	ENSCHOG00000001476	SF3B2	84	76.000	Choloepus_hoffmanni
ENSELUG00000005586	sf3b2	84	74.202	ENSCPBG00000022465	SF3B2	95	77.165	Chrysemys_picta_bellii
ENSELUG00000005586	sf3b2	74	62.679	ENSCING00000005665	-	99	61.859	Ciona_intestinalis
ENSELUG00000005586	sf3b2	63	68.037	ENSCSAVG00000002029	-	84	67.932	Ciona_savignyi
ENSELUG00000005586	sf3b2	86	71.499	ENSCANG00000039680	SF3B2	97	66.848	Colobus_angolensis_palliatus
ENSELUG00000005586	sf3b2	84	72.922	ENSCGRG00001015741	Sf3b2	97	65.506	Cricetulus_griseus_chok1gshd
ENSELUG00000005586	sf3b2	84	72.922	ENSCGRG00000018110	Sf3b2	97	65.506	Cricetulus_griseus_crigri
ENSELUG00000005586	sf3b2	90	75.732	ENSCSEG00000000230	sf3b2	100	78.099	Cynoglossus_semilaevis
ENSELUG00000005586	sf3b2	100	74.838	ENSCVAG00000003357	sf3b2	100	74.403	Cyprinodon_variegatus
ENSELUG00000005586	sf3b2	98	71.620	ENSDARG00000018049	sf3b2	99	73.966	Danio_rerio
ENSELUG00000005586	sf3b2	97	67.177	ENSDNOG00000009484	SF3B2	97	69.430	Dasypus_novemcinctus
ENSELUG00000005586	sf3b2	86	70.435	ENSDORG00000002495	Sf3b2	97	65.351	Dipodomys_ordii
ENSELUG00000005586	sf3b2	55	78.767	ENSETEG00000020284	SF3B2	79	78.654	Echinops_telfairi
ENSELUG00000005586	sf3b2	90	61.097	ENSEBUG00000013703	sf3b2	99	54.545	Eptatretus_burgeri
ENSELUG00000005586	sf3b2	86	71.640	ENSEASG00005004508	SF3B2	97	66.847	Equus_asinus_asinus
ENSELUG00000005586	sf3b2	86	71.640	ENSECAG00000024461	SF3B2	97	66.847	Equus_caballus
ENSELUG00000005586	sf3b2	59	82.353	ENSEEUG00000014278	-	53	82.353	Erinaceus_europaeus
ENSELUG00000005586	sf3b2	86	71.801	ENSFCAG00000013289	SF3B2	97	66.848	Felis_catus
ENSELUG00000005586	sf3b2	74	68.254	ENSFALG00000014653	SF3B2	91	67.538	Ficedula_albicollis
ENSELUG00000005586	sf3b2	86	72.035	ENSFDAG00000019806	SF3B2	97	67.138	Fukomys_damarensis
ENSELUG00000005586	sf3b2	100	74.409	ENSFHEG00000020968	sf3b2	100	74.624	Fundulus_heteroclitus
ENSELUG00000005586	sf3b2	72	85.671	ENSGMOG00000012131	sf3b2	100	85.370	Gadus_morhua
ENSELUG00000005586	sf3b2	100	73.412	ENSGAFG00000001675	sf3b2	100	75.510	Gambusia_affinis
ENSELUG00000005586	sf3b2	72	84.662	ENSGACG00000019012	sf3b2	100	82.556	Gasterosteus_aculeatus
ENSELUG00000005586	sf3b2	84	74.629	ENSGAGG00000023916	SF3B2	98	64.815	Gopherus_agassizii
ENSELUG00000005586	sf3b2	78	87.465	ENSGGOG00000028448	SF3B2	97	87.465	Gorilla_gorilla
ENSELUG00000005586	sf3b2	100	78.672	ENSHBUG00000017349	sf3b2	100	78.564	Haplochromis_burtoni
ENSELUG00000005586	sf3b2	84	72.654	ENSHGLG00000010807	SF3B2	97	65.758	Heterocephalus_glaber_female
ENSELUG00000005586	sf3b2	86	71.747	ENSHGLG00100006361	SF3B2	97	67.176	Heterocephalus_glaber_male
ENSELUG00000005586	sf3b2	100	73.420	ENSHCOG00000016203	sf3b2	100	72.817	Hippocampus_comes
ENSELUG00000005586	sf3b2	100	73.081	ENSIPUG00000009383	sf3b2	100	75.325	Ictalurus_punctatus
ENSELUG00000005586	sf3b2	86	72.319	ENSSTOG00000028892	SF3B2	97	67.325	Ictidomys_tridecemlineatus
ENSELUG00000005586	sf3b2	86	70.588	ENSJJAG00000018193	Sf3b2	97	65.540	Jaculus_jaculus
ENSELUG00000005586	sf3b2	63	92.060	ENSKMAG00000020181	sf3b2	100	73.667	Kryptolebias_marmoratus
ENSELUG00000005586	sf3b2	100	79.696	ENSLBEG00000027739	sf3b2	100	79.805	Labrus_bergylta
ENSELUG00000005586	sf3b2	79	79.658	ENSLACG00000010429	SF3B2	100	65.880	Latimeria_chalumnae
ENSELUG00000005586	sf3b2	86	70.625	ENSLAFG00000002128	SF3B2	97	65.543	Loxodonta_africana
ENSELUG00000005586	sf3b2	86	71.411	ENSMFAG00000003064	SF3B2	97	66.776	Macaca_fascicularis
ENSELUG00000005586	sf3b2	86	67.706	ENSMMUG00000011743	SF3B2	97	63.129	Macaca_mulatta
ENSELUG00000005586	sf3b2	86	71.499	ENSMNEG00000034437	SF3B2	97	66.848	Macaca_nemestrina
ENSELUG00000005586	sf3b2	86	71.499	ENSMLEG00000029373	SF3B2	97	66.848	Mandrillus_leucophaeus
ENSELUG00000005586	sf3b2	100	80.952	ENSMAMG00000014103	sf3b2	100	80.736	Mastacembelus_armatus
ENSELUG00000005586	sf3b2	100	78.672	ENSMZEG00005020789	sf3b2	100	78.564	Maylandia_zebra
ENSELUG00000005586	sf3b2	86	72.195	ENSMICG00000008565	-	97	66.957	Microcebus_murinus
ENSELUG00000005586	sf3b2	97	65.372	ENSMICG00000016942	-	97	64.531	Microcebus_murinus
ENSELUG00000005586	sf3b2	84	72.654	ENSMOCG00000003136	Sf3b2	97	65.288	Microtus_ochrogaster
ENSELUG00000005586	sf3b2	100	73.937	ENSMMOG00000012928	sf3b2	100	73.391	Mola_mola
ENSELUG00000005586	sf3b2	84	73.369	ENSMODG00000008490	-	95	70.551	Monodelphis_domestica
ENSELUG00000005586	sf3b2	73	73.768	ENSMODG00000025020	-	99	71.701	Monodelphis_domestica
ENSELUG00000005586	sf3b2	100	74.356	ENSMALG00000015137	sf3b2	100	73.927	Monopterus_albus
ENSELUG00000005586	sf3b2	86	70.537	MGP_CAROLIEiJ_G0022539	Sf3b2	97	65.049	Mus_caroli
ENSELUG00000005586	sf3b2	86	70.537	ENSMUSG00000024853	Sf3b2	97	65.288	Mus_musculus
ENSELUG00000005586	sf3b2	86	70.412	MGP_PahariEiJ_G0014036	Sf3b2	97	65.397	Mus_pahari
ENSELUG00000005586	sf3b2	84	72.520	MGP_SPRETEiJ_G0023453	Sf3b2	97	65.217	Mus_spretus
ENSELUG00000005586	sf3b2	86	71.925	ENSMPUG00000011349	SF3B2	97	66.848	Mustela_putorius_furo
ENSELUG00000005586	sf3b2	86	71.517	ENSMLUG00000011136	SF3B2	97	66.558	Myotis_lucifugus
ENSELUG00000005586	sf3b2	86	70.964	ENSNGAG00000012103	Sf3b2	97	65.862	Nannospalax_galili
ENSELUG00000005586	sf3b2	88	68.448	ENSNLEG00000006007	SF3B2	97	63.095	Nomascus_leucogenys
ENSELUG00000005586	sf3b2	75	83.853	ENSMEUG00000000019	SF3B2	86	81.844	Notamacropus_eugenii
ENSELUG00000005586	sf3b2	97	62.460	ENSODEG00000017764	SF3B2	97	62.445	Octodon_degus
ENSELUG00000005586	sf3b2	100	78.186	ENSONIG00000013068	sf3b2	100	77.430	Oreochromis_niloticus
ENSELUG00000005586	sf3b2	84	66.488	ENSOANG00000012482	SF3B2	78	80.044	Ornithorhynchus_anatinus
ENSELUG00000005586	sf3b2	60	47.398	ENSOCUG00000024154	-	100	45.951	Oryctolagus_cuniculus
ENSELUG00000005586	sf3b2	97	67.255	ENSOCUG00000015722	-	97	65.649	Oryctolagus_cuniculus
ENSELUG00000005586	sf3b2	100	74.783	ENSORLG00000008235	sf3b2	97	73.370	Oryzias_latipes
ENSELUG00000005586	sf3b2	100	74.783	ENSORLG00020005357	sf3b2	100	73.370	Oryzias_latipes_hni
ENSELUG00000005586	sf3b2	100	74.674	ENSORLG00015022454	sf3b2	87	88.172	Oryzias_latipes_hsok
ENSELUG00000005586	sf3b2	100	72.283	ENSOMEG00000017480	sf3b2	100	72.609	Oryzias_melastigma
ENSELUG00000005586	sf3b2	84	69.079	ENSOGAG00000005799	SF3B2	59	86.252	Otolemur_garnettii
ENSELUG00000005586	sf3b2	97	65.439	ENSOARG00000002125	SF3B2	100	71.264	Ovis_aries
ENSELUG00000005586	sf3b2	86	71.499	ENSPPAG00000007359	SF3B2	97	66.848	Pan_paniscus
ENSELUG00000005586	sf3b2	86	71.801	ENSPPRG00000013334	SF3B2	97	66.848	Panthera_pardus
ENSELUG00000005586	sf3b2	86	71.801	ENSPTIG00000015022	SF3B2	97	66.848	Panthera_tigris_altaica
ENSELUG00000005586	sf3b2	86	71.499	ENSPTRG00000003912	SF3B2	97	66.848	Pan_troglodytes
ENSELUG00000005586	sf3b2	86	71.499	ENSPANG00000008593	SF3B2	97	66.848	Papio_anubis
ENSELUG00000005586	sf3b2	100	78.821	ENSPKIG00000016576	sf3b2	94	87.188	Paramormyrops_kingsleyae
ENSELUG00000005586	sf3b2	73	86.506	ENSPSIG00000003158	SF3B2	91	85.234	Pelodiscus_sinensis
ENSELUG00000005586	sf3b2	93	71.106	ENSPMGG00000000819	sf3b2	100	69.752	Periophthalmus_magnuspinnatus
ENSELUG00000005586	sf3b2	84	72.788	ENSPEMG00000015437	Sf3b2	97	65.397	Peromyscus_maniculatus_bairdii
ENSELUG00000005586	sf3b2	88	66.317	ENSPEMG00000015451	-	94	66.309	Peromyscus_maniculatus_bairdii
ENSELUG00000005586	sf3b2	84	71.600	ENSPCIG00000008381	SF3B2	99	66.075	Phascolarctos_cinereus
ENSELUG00000005586	sf3b2	100	73.412	ENSPFOG00000002552	sf3b2	100	74.839	Poecilia_formosa
ENSELUG00000005586	sf3b2	100	73.520	ENSPLAG00000001471	sf3b2	100	75.054	Poecilia_latipinna
ENSELUG00000005586	sf3b2	100	72.845	ENSPMEG00000013180	sf3b2	100	75.027	Poecilia_mexicana
ENSELUG00000005586	sf3b2	100	70.829	ENSPREG00000002665	sf3b2	100	74.973	Poecilia_reticulata
ENSELUG00000005586	sf3b2	61	64.818	ENSPPYG00000003034	-	96	59.680	Pongo_abelii
ENSELUG00000005586	sf3b2	97	67.834	ENSPCAG00000005129	SF3B2	97	67.213	Procavia_capensis
ENSELUG00000005586	sf3b2	86	71.375	ENSPCOG00000025375	SF3B2	97	66.630	Propithecus_coquereli
ENSELUG00000005586	sf3b2	57	93.860	ENSPVAG00000005466	-	82	93.860	Pteropus_vampyrus
ENSELUG00000005586	sf3b2	88	76.738	ENSPNYG00000023594	sf3b2	99	80.775	Pundamilia_nyererei
ENSELUG00000005586	sf3b2	100	76.439	ENSPNAG00000001891	sf3b2	100	78.308	Pygocentrus_nattereri
ENSELUG00000005586	sf3b2	84	72.520	ENSRNOG00000020412	Sf3b2	97	65.180	Rattus_norvegicus
ENSELUG00000005586	sf3b2	86	71.623	ENSRBIG00000034065	SF3B2	97	66.957	Rhinopithecus_bieti
ENSELUG00000005586	sf3b2	86	71.623	ENSRROG00000034496	SF3B2	97	66.957	Rhinopithecus_roxellana
ENSELUG00000005586	sf3b2	97	67.035	ENSSBOG00000026337	SF3B2	97	65.076	Saimiri_boliviensis_boliviensis
ENSELUG00000005586	sf3b2	63	73.635	ENSSHAG00000018043	-	100	55.017	Sarcophilus_harrisii
ENSELUG00000005586	sf3b2	84	69.170	ENSSHAG00000010933	-	97	63.308	Sarcophilus_harrisii
ENSELUG00000005586	sf3b2	100	78.214	ENSSFOG00015021125	sf3b2	100	77.669	Scleropages_formosus
ENSELUG00000005586	sf3b2	100	79.010	ENSSMAG00000004079	sf3b2	97	79.117	Scophthalmus_maximus
ENSELUG00000005586	sf3b2	91	93.169	ENSSDUG00000008499	sf3b2	100	75.679	Seriola_dumerili
ENSELUG00000005586	sf3b2	83	88.805	ENSSLDG00000006838	sf3b2	100	80.988	Seriola_lalandi_dorsalis
ENSELUG00000005586	sf3b2	84	74.694	ENSSPUG00000009198	SF3B2	98	65.649	Sphenodon_punctatus
ENSELUG00000005586	sf3b2	100	79.149	ENSSPAG00000004406	sf3b2	100	79.255	Stegastes_partitus
ENSELUG00000005586	sf3b2	86	71.925	ENSSSCG00000012957	SF3B2	97	67.174	Sus_scrofa
ENSELUG00000005586	sf3b2	100	62.336	ENSTRUG00000007611	sf3b2	97	76.516	Takifugu_rubripes
ENSELUG00000005586	sf3b2	98	73.214	ENSTNIG00000007441	sf3b2	100	72.433	Tetraodon_nigroviridis
ENSELUG00000005586	sf3b2	68	84.397	ENSTBEG00000004258	SF3B2	78	84.397	Tupaia_belangeri
ENSELUG00000005586	sf3b2	86	71.801	ENSTTRG00000014339	SF3B2	97	66.848	Tursiops_truncatus
ENSELUG00000005586	sf3b2	84	71.228	ENSUAMG00000020754	SF3B2	96	64.489	Ursus_americanus
ENSELUG00000005586	sf3b2	86	71.801	ENSUMAG00000010994	SF3B2	97	66.848	Ursus_maritimus
ENSELUG00000005586	sf3b2	60	81.513	ENSVPAG00000008695	SF3B2	65	81.513	Vicugna_pacos
ENSELUG00000005586	sf3b2	86	71.801	ENSVVUG00000027029	SF3B2	97	66.848	Vulpes_vulpes
ENSELUG00000005586	sf3b2	88	65.167	ENSXETG00000008422	sf3b2	99	64.479	Xenopus_tropicalis
ENSELUG00000005586	sf3b2	85	79.523	ENSXCOG00000008943	sf3b2	95	81.776	Xiphophorus_couchianus
ENSELUG00000005586	sf3b2	63	92.992	ENSXMAG00000008467	sf3b2	100	74.866	Xiphophorus_maculatus