EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000005597 (Gene tree)
Gene ID: 105029564
Gene Symbol: rab34b
Alias: si:dkey-220h13.7
Full Name: ras-related protein Rab-34-like
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 10731 bases
Position: chrLG07:4443436-4454166
Accession: 105029564
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000028857	MMR_HSR1	PF01926.23	1.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000012345	-	1434	XM_010902988	ENSELUP00000028857	258 (aa)	XP_010901290	UPI0005768C01

Gene Model

Click here to download ENSELUG00000005597's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000005597's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000005597	rab34b	62	38.509	ENSELUG00000022470	rab6bb	76	38.509
ENSELUG00000005597	rab34b	99	72.763	ENSELUG00000022157	rab34a	97	72.763
ENSELUG00000005597	rab34b	74	30.288	ENSELUG00000019264	dnajc27	73	30.288
ENSELUG00000005597	rab34b	67	31.429	ENSELUG00000006539	RAB7A	84	31.429
ENSELUG00000005597	rab34b	65	35.928	ENSELUG00000005989	RAB15	76	35.928
ENSELUG00000005597	rab34b	60	31.447	ENSELUG00000016622	rab9a	78	31.447
ENSELUG00000005597	rab34b	62	31.447	ENSELUG00000018367	rheb	85	31.447
ENSELUG00000005597	rab34b	57	37.584	ENSELUG00000013219	rab33a	62	37.584
ENSELUG00000005597	rab34b	62	37.888	ENSELUG00000012428	-	79	37.888
ENSELUG00000005597	rab34b	64	38.235	ENSELUG00000005304	rab39ba	77	38.235
ENSELUG00000005597	rab34b	79	35.922	ENSELUG00000023972	rab35	96	35.437
ENSELUG00000005597	rab34b	62	30.625	ENSELUG00000010439	-	71	30.625
ENSELUG00000005597	rab34b	50	39.231	ENSELUG00000019240	-	65	41.880
ENSELUG00000005597	rab34b	62	33.125	ENSELUG00000015343	rab22a	81	33.125
ENSELUG00000005597	rab34b	98	51.908	ENSELUG00000018921	rab36	98	51.908
ENSELUG00000005597	rab34b	62	37.267	ENSELUG00000023815	-	79	37.267
ENSELUG00000005597	rab34b	62	37.500	ENSELUG00000007123	rab12	65	37.500
ENSELUG00000005597	rab34b	50	37.594	ENSELUG00000004378	rab9b	66	37.594
ENSELUG00000005597	rab34b	62	40.373	ENSELUG00000008876	rab6a	76	40.373
ENSELUG00000005597	rab34b	62	31.250	ENSELUG00000018516	rab5c	72	31.250
ENSELUG00000005597	rab34b	62	33.540	ENSELUG00000006604	rab25a	74	33.540
ENSELUG00000005597	rab34b	65	35.928	ENSELUG00000009832	rab14	76	35.928
ENSELUG00000005597	rab34b	60	34.615	ENSELUG00000016450	rab18b	75	34.615
ENSELUG00000005597	rab34b	75	34.359	ENSELUG00000021148	rab11bb	82	34.359
ENSELUG00000005597	rab34b	65	35.928	ENSELUG00000013571	-	76	35.928
ENSELUG00000005597	rab34b	62	39.130	ENSELUG00000011680	zgc:171927	75	39.130
ENSELUG00000005597	rab34b	79	34.483	ENSELUG00000001257	rab6ba	93	34.483
ENSELUG00000005597	rab34b	62	32.500	ENSELUG00000013436	rab5ab	73	32.500
ENSELUG00000005597	rab34b	67	32.948	ENSELUG00000010345	rab42a	79	32.948
ENSELUG00000005597	rab34b	69	34.270	ENSELUG00000023120	-	82	34.270
ENSELUG00000005597	rab34b	58	36.242	ENSELUG00000020788	rab23	66	38.750
ENSELUG00000005597	rab34b	62	38.509	ENSELUG00000012166	RAB1A	74	38.509
ENSELUG00000005597	rab34b	65	34.731	ENSELUG00000020012	rab15	77	34.731
ENSELUG00000005597	rab34b	67	34.286	ENSELUG00000000916	-	84	40.678
ENSELUG00000005597	rab34b	68	33.143	ENSELUG00000014785	rab4a	78	33.143
ENSELUG00000005597	rab34b	62	36.875	ENSELUG00000022997	rab30	78	36.875
ENSELUG00000005597	rab34b	64	35.152	ENSELUG00000023964	rab2a	76	35.152
ENSELUG00000005597	rab34b	62	31.902	ENSELUG00000000175	zgc:100918	79	31.902
ENSELUG00000005597	rab34b	67	31.429	ENSELUG00000016682	-	84	31.429
ENSELUG00000005597	rab34b	68	33.523	ENSELUG00000003805	rab18a	84	33.523
ENSELUG00000005597	rab34b	80	31.100	ENSELUG00000012060	rab25b	94	31.100
ENSELUG00000005597	rab34b	64	36.747	ENSELUG00000013957	-	77	36.747
ENSELUG00000005597	rab34b	61	39.490	ENSELUG00000012801	rab13	77	39.490
ENSELUG00000005597	rab34b	62	37.888	ENSELUG00000015413	rab1ab	79	37.888
ENSELUG00000005597	rab34b	62	30.189	ENSELUG00000006480	rheb	85	30.189
ENSELUG00000005597	rab34b	79	33.010	ENSELUG00000023247	si:dkey-16l2.16	94	33.010

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000005597	rab34b	86	82.063	ENSAPOG00000019147	rab34b	96	75.124	Acanthochromis_polyacanthus
ENSELUG00000005597	rab34b	99	73.047	ENSACIG00000004859	rab34b	99	72.656	Amphilophus_citrinellus
ENSELUG00000005597	rab34b	99	79.767	ENSAOCG00000007106	rab34b	94	79.767	Amphiprion_ocellaris
ENSELUG00000005597	rab34b	89	81.739	ENSAPEG00000018607	rab34b	85	80.672	Amphiprion_percula
ENSELUG00000005597	rab34b	93	79.253	ENSATEG00000006851	rab34b	94	79.253	Anabas_testudineus
ENSELUG00000005597	rab34b	99	81.641	ENSACLG00000005733	rab34b	96	81.641	Astatotilapia_calliptera
ENSELUG00000005597	rab34b	99	72.266	ENSAMXG00000006018	rab34b	99	72.266	Astyanax_mexicanus
ENSELUG00000005597	rab34b	91	79.237	ENSCSEG00000018133	rab34b	94	79.237	Cynoglossus_semilaevis
ENSELUG00000005597	rab34b	100	74.031	ENSDARG00000010977	rab34b	99	74.031	Danio_rerio
ENSELUG00000005597	rab34b	99	81.569	ENSFHEG00000004532	rab34b	100	81.569	Fundulus_heteroclitus
ENSELUG00000005597	rab34b	81	77.885	ENSGMOG00000007140	rab34b	100	77.885	Gadus_morhua
ENSELUG00000005597	rab34b	99	81.250	ENSGACG00000020514	rab34b	99	81.250	Gasterosteus_aculeatus
ENSELUG00000005597	rab34b	98	71.373	ENSIPUG00000024531	rab34	98	71.373	Ictalurus_punctatus
ENSELUG00000005597	rab34b	99	81.569	ENSKMAG00000019341	rab34b	100	81.569	Kryptolebias_marmoratus
ENSELUG00000005597	rab34b	99	82.353	ENSLBEG00000027819	rab34b	100	82.353	Labrus_bergylta
ENSELUG00000005597	rab34b	99	80.000	ENSMAMG00000020214	rab34b	100	80.000	Mastacembelus_armatus
ENSELUG00000005597	rab34b	99	79.688	ENSMMOG00000010936	rab34b	87	79.688	Mola_mola
ENSELUG00000005597	rab34b	91	82.278	ENSMALG00000018499	rab34b	89	82.278	Monopterus_albus
ENSELUG00000005597	rab34b	99	81.961	ENSONIG00000005519	rab34b	100	81.961	Oreochromis_niloticus
ENSELUG00000005597	rab34b	99	79.377	ENSORLG00000003119	rab34b	93	79.377	Oryzias_latipes
ENSELUG00000005597	rab34b	99	79.377	ENSORLG00020016139	rab34b	93	79.377	Oryzias_latipes_hni
ENSELUG00000005597	rab34b	99	79.767	ENSORLG00015000584	rab34b	93	79.767	Oryzias_latipes_hsok
ENSELUG00000005597	rab34b	99	80.392	ENSOMEG00000010334	rab34b	98	79.508	Oryzias_melastigma
ENSELUG00000005597	rab34b	99	71.875	ENSPKIG00000013326	rab34b	99	71.875	Paramormyrops_kingsleyae
ENSELUG00000005597	rab34b	99	78.906	ENSPMGG00000021697	rab34b	99	78.906	Periophthalmus_magnuspinnatus
ENSELUG00000005597	rab34b	99	81.250	ENSPFOG00000011444	rab34b	100	81.250	Poecilia_formosa
ENSELUG00000005597	rab34b	99	81.176	ENSPLAG00000005074	rab34b	100	81.176	Poecilia_latipinna
ENSELUG00000005597	rab34b	99	81.176	ENSPMEG00000013297	rab34b	100	81.176	Poecilia_mexicana
ENSELUG00000005597	rab34b	99	80.784	ENSPREG00000009813	rab34b	100	80.784	Poecilia_reticulata
ENSELUG00000005597	rab34b	99	73.047	ENSPNYG00000017153	rab34b	99	87.571	Pundamilia_nyererei
ENSELUG00000005597	rab34b	92	74.684	ENSPNAG00000015040	rab34b	99	74.684	Pygocentrus_nattereri
ENSELUG00000005597	rab34b	99	72.374	ENSSFOG00015005188	rab34	99	72.374	Scleropages_formosus
ENSELUG00000005597	rab34b	94	81.070	ENSSMAG00000019926	rab34b	100	79.325	Scophthalmus_maximus
ENSELUG00000005597	rab34b	99	85.156	ENSSDUG00000016760	rab34b	80	85.156	Seriola_dumerili
ENSELUG00000005597	rab34b	71	89.674	ENSSLDG00000014812	rab34b	90	89.674	Seriola_lalandi_dorsalis
ENSELUG00000005597	rab34b	99	80.392	ENSSPAG00000002801	rab34b	100	80.392	Stegastes_partitus
ENSELUG00000005597	rab34b	94	78.189	ENSTRUG00000014481	rab34b	98	78.189	Takifugu_rubripes
ENSELUG00000005597	rab34b	99	78.125	ENSTNIG00000016158	rab34b	99	78.125	Tetraodon_nigroviridis